Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq75 129 8e-24
seq15 114 2e-19
seq153 104 3e-16
seq155 96.9 5e-14
>seq75
Length=245354
Score = 129 bits (142), Expect = 8e-24
Identities = 208/296 (70%), Gaps = 5/296 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||| ||||| ||||||||||| || | || |
Sbjct 38633 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAAATTGATC 38691
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCG---CTGAGCGACGACGAGCGCCATTTCATCA 1455891
|| | ||| | | ||| || | |||||||||||| | ||||||
Sbjct 38692 TCTCCAAGGACCTTCACGATTGGAACAACAGACTCAACGACGACGAGCGTTACTTCATCT 38751
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|| |||||||| || || ||| || ||||| || || ||||||||| | ||
Sbjct 38752 CACATGTCCTCGCATTCTT-CGCAGCATCTGATGGAATTGTCAACGAGAACCTTGTCGAG 38810
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | || || ||| | || ||||| || | || ||||| ||||| |||
Sbjct 38811 CGCTTCAGTGGTGAAGTTCAAATTCCTGAGGCTCGATGCTTCTACGGTTTCCAAATCATG 38870
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || |||||||||||||| |||||||| ||||| ||||||||||| | |||||
Sbjct 38871 ATGGAGAACATCCACTCTGAGACCTACTCTCTCCTCATCGACACCTATATTAAGGA 38926
Score = 89.7 bits (98), Expect = 7e-12
Identities = 170/245 (69%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590
|||||||||| | |||||| |||| || | | |||| | || || || || ||||
Sbjct 39296 CGAGGCCGTCCAAATCGAGCAAGAATTCTTAACCGAGGCCCTTCCTTGTGCTCTTCTCGG 39355
Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650
|||||||| || || ||| || ||||| || ||| || ||||| || |||||
Sbjct 39356 TATGAACGCAACT-CTAATGAAGCAATACATCGAGTTT-GTTGCCGATCGTCTGCTTCTC 39413
Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710
|| ||||| | ||||| |||| | | ||||||| ||| | |||||| ||
Sbjct 39414 GCCCTCGGAAATG-AGAAGGTCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACAT 39472
Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGCCGG 1456769
||| || | |||||||||||||| |||||| || || || || ||| ||||||||
Sbjct 39473 CTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAAAAGGCCGG 39532
Query 1456770 CGTCA 1456774
||||
Sbjct 39533 TGTCA 39537
>seq15
Length=607589
Score = 114 bits (126), Expect = 2e-19
Identities = 186/261 (71%), Gaps = 5/261 (2%)
Strand=Plus/Minus
Query 1456515 CCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGC 1456574
|||||| | | ||| |||||||||||| |||||| |||| || | | |||| | || |
Sbjct 330937 CCAAGCTGTT-ATCACCGAGGCCGTCGAAATCGAGCAAGAATTCTTAACCGAGGCCCTTC 330879
Query 1456575 CGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGC 1456634
| || || |||| |||||||| || |||||| || ||||| |||||| || ||
Sbjct 330878 CTTGTGCTCTTCTCGGTATGAACGCAACT-CTCATGAAGCAATACATCGAATTT-GTTGC 330821
Query 1456635 CGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCC 1456694
||| || |||||| || ||||| || ||||| |||| | | ||||||| |||
Sbjct 330820 CGATCGTCTGCTCCTTGCCCTCGGAAACG-AGAAGGTCTACAAGTCTACCAACCCATTCG 330762
Query 1456695 CATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCG 1456753
| |||||| ||||| || | |||||||||||||| |||||| || || || |
Sbjct 330761 ACTTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTG 330702
Query 1456754 AGTACGCCAAGGCCGGCGTCA 1456774
| ||| |||||||| ||||
Sbjct 330701 ACTACCAAAAGGCCGGTGTCA 330681
Score = 114 bits (126), Expect = 2e-19
Identities = 205/296 (69%), Gaps = 5/296 (2%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||| ||||| ||||||||||| || | || |
Sbjct 331593 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAAATTGATC 331535
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCG---CTGAGCGACGACGAGCGCCATTTCATCA 1455891
|| | ||| | | ||| || | ||| ||||| || | ||||||
Sbjct 331534 TCTCCAAGGACCTTCACGATTGGAACAACAGACTCACCGATGACGAACGTTACTTCATCT 331475
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|| |||||||| || || ||| || ||||| || || ||||||||| | ||
Sbjct 331474 CACATGTCCTCGCATTCTT-CGCAGCATCTGATGGAATTGTCAACGAGAACCTTGTCGAG 331416
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | || || ||| | || ||||| || | || ||||| ||||| |||
Sbjct 331415 CGCTTCAGTGGTGAAGTTCAAATTCCTGAGGCTCGATGCTTCTACGGTTTCCAAATCATG 331356
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || ||||||||||| || |||||||| ||||| ||||||||||| | |||||
Sbjct 331355 ATGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATCGACACCTATATTAAGGA 331300
>seq153
Length=80566
Score = 104 bits (114), Expect = 3e-16
Identities = 200/290 (69%), Gaps = 4/290 (1%)
Strand=Plus/Minus
Query 259895 ATGTCGCAGCAG-TTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952
||||| ||||| || ||||| ||| || | ||||| ||||| ||||| || || |
Sbjct 61073 ATGTC-CAGCAAATTCTTCAC-TCACGCATCTCCCACTCTCTTCTCGGCCGGTACCCCAC 61016
Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012
| || ||| || ||||| ||| | |||||||||| || || || || ||||
Sbjct 61015 AGGCCCAACTTTCATCATGCTTCCTGATCGACATGAAGGAGGACAGTATTGACGGTATCT 60956
Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072
| |||||||| ||| || || | ||||| ||| || || ||||||||| | |
Sbjct 60955 ACGACACGCTAAAGACCTGTGCAATGATCTCAAAGAATGCTGGAGGCATCGGTCTCAACA 60896
Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132
|||| | || || | || |||||| | || || || || || | ||||| |||
Sbjct 60895 TCCACAGAATTCGGGCTACCGGGGCCTACATCGCCGGTACAAATGGAAACTCCAATGGCA 60836
Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
||||||||||||| || || || ||| |||| || | |||||||| |||
Sbjct 60835 TTGTGCCCATGCTCCGAGTCTTCAACAACACCGCAAGATACGTCGATCAG 60786
Score = 86.0 bits (94), Expect = 9e-11
Identities = 101/135 (75%), Gaps = 4/135 (3%)
Strand=Plus/Minus
Query 262095 TCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGG 262154
|||||| |||| ||| |||||| | ||||||||| | |||| |||| |||||||||
Sbjct 60484 TCTGGTACTCCATCCTCGAGGCCCAAACCGAGACCGGGAACCCCTTCATGCTCTACAAGG 60425
Query 262155 ACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGC--CAACCT 262212
| || ||||| | ||||||||| |||||||||| || | | || || ||||||
Sbjct 60424 ATGCTTGCAACCGAAAGAGCAACCAGAAGAACCTGGGAACAAT--CCGAAGCTCCAACCT 60367
Query 262213 GTGCACCGAGATCGT 262227
|||||| || || ||
Sbjct 60366 GTGCACAGAAATTGT 60352
>seq155
Length=79386
Score = 96.9 bits (106), Expect = 5e-14
Identities = 176/258 (68%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
||||| ||||| ||||| || || | | || ||| || ||||| ||| | |||
Sbjct 57139 CCCACTCTCTTCTCGGCCGGTACCCCACAGGCCCAACTTTCATCATGCTTCCTGATCGAC 57080
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| || || || || ||||| |||||||| ||| || || | |||||
Sbjct 57079 ATGAAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGACCTGTGCAATGATCTCA 57020
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| || || ||||||||| | | |||| | || || | || |||||| |
Sbjct 57019 AAGAATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGGCTACCGGGGCCTACATC 56960
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| || || || || | ||||| ||| ||||||||||||| || || || ||| ||||
Sbjct 56959 GCCGGTACAAATGGGAACTCCAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACACC 56900
Query 260165 GCGCGCTACGTCGACCAG 260182
|| | || ||||| |||
Sbjct 56899 GCAAGATATGTCGATCAG 56882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177713397836268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |