Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq96 138 1e-27
seq7 138 1e-27
seq59 87.8 2e-12
seq10 87.8 2e-12
>seq96
Length=182788
Score = 138 bits (152), Expect = 1e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || ||||||||||| |||||||||||| | ||| || || ||||||||
Sbjct 166640 GTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGCTG 166581
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| |||||||| | ||| || ||||| || || |||||||| || |||||||| ||
Sbjct 166580 CTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTT 166521
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
| |||||| ||| | || || || || ||||| || | || || || || |||||
Sbjct 166520 TGATTTGACGTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCTTGCCGGT 166461
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| ||| || ||||| ||||||||
Sbjct 166460 GAGAGTCTTGACGAAGATTTGCAT 166437
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || || || ||||| || |||||||||||| | ||| || ||| ||
Sbjct 166133 ACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 166074
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|| || ||||| || || |||| ||| ||||| || || || ||||| || || |||||
Sbjct 166073 AGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 166014
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | ||||| || ||||| || || ||||| ||||| ||
Sbjct 166013 ATCTTGGACTTGACATTGTCGATGGTGTCAGAGGATTCAACCTCAAGAGTGATGGTCTTG 165954
Query 134685 CCGGT 134689
|||||
Sbjct 165953 CCGGT 165949
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || | ||| || || || ||||| || ||||||||||||
Sbjct 166435 CCACCACGGAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 166376
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || ||||| || ||||| || || |||| ||| || ||||| || ||
Sbjct 166375 AGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGGGGA 166316
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || ||||| || || ||||| ||| | ||||| || ||||| ||
Sbjct 166315 ATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTGTCAGAGGATTCGACC 166256
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
||||| || ||||| || |||||
Sbjct 166255 TCGAGGGTGATGGTCTTGCCGGT 166233
>seq7
Length=756160
Score = 138 bits (152), Expect = 1e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || ||||||||||| |||||||||||| | ||| || || ||||| ||
Sbjct 415633 GTGCAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGTTG 415574
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || ||||| | ||| || ||||| || || |||||||| || |||||||| ||
Sbjct 415573 CTTGCCAGCGAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTT 415514
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
| |||||| ||| | || || || |||||||| || | ||||| || || |||||
Sbjct 415513 TGATTTGACGTTGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCCGGT 415454
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| ||| || ||||| ||||||||
Sbjct 415453 GAGAGTCTTGACGAAGATTTGCAT 415430
Score = 109 bits (120), Expect = 6e-19
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || || || ||||| || ||||||||||| | ||| || ||| ||
Sbjct 415126 ACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCGTCCTCA 415067
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|| || ||||| || || |||| ||| ||||| ||||| || ||||| || || |||||
Sbjct 415066 AGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGG 415007
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | |||||||| ||||| || || ||||| ||||| ||
Sbjct 415006 ATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCAACCTCAAGAGTGATGGTCTTG 414947
Query 134685 CCGGT 134689
|||||
Sbjct 414946 CCGGT 414942
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || | ||| || || || ||||| || ||||||||||||
Sbjct 415428 CCACCACGGAGACGGAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 415369
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || ||||| || ||||| || || |||| ||| || ||||| || ||
Sbjct 415368 AGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGAGGG 415309
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || ||||| || || ||||| ||| | || || || ||||| ||
Sbjct 415308 ATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTATCAGAAGATTCGACC 415249
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
||||| || ||||| || |||||
Sbjct 415248 TCGAGGGTGATGGTCTTGCCGGT 415226
>seq59
Length=321881
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || ||||||||||| || ||| || ||| || || || || || || || |
Sbjct 265768 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 265827
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| ||||||||| || || || || || || || || || || || |||||| ||
Sbjct 265828 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 265887
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||||||| || || || || || || ||||| || || || | || || ||||
Sbjct 265888 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 265947
Query 134704 A 134704
|
Sbjct 265948 A 265948
>seq10
Length=717553
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || ||||||||||| || ||| || ||| || || || || || || || |
Sbjct 20116 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 20057
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| ||||||||| || || || || || || || || || || || |||||| ||
Sbjct 20056 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 19997
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||||||| || || || || || || ||||| || || || | || || ||||
Sbjct 19996 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 19937
Query 134704 A 134704
|
Sbjct 19936 A 19936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505391994075280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |