Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq96 138 1e-27 seq7 138 1e-27 seq59 87.8 2e-12 seq10 87.8 2e-12 >seq96 Length=182788 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| |||||||||||| | ||| || || |||||||| Sbjct 166640 GTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGCTG 166581 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| |||||||| | ||| || ||||| || || |||||||| || |||||||| || Sbjct 166580 CTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTT 166521 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | |||||| ||| | || || || || ||||| || | || || || || ||||| Sbjct 166520 TGATTTGACGTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCTTGCCGGT 166461 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||| || ||||| |||||||| Sbjct 166460 GAGAGTCTTGACGAAGATTTGCAT 166437 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || |||||||||||| | ||| || ||| || Sbjct 166133 ACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 166074 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| || || |||| ||| ||||| || || || ||||| || || ||||| Sbjct 166073 AGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 166014 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | ||||| || ||||| || || ||||| ||||| || Sbjct 166013 ATCTTGGACTTGACATTGTCGATGGTGTCAGAGGATTCAACCTCAAGAGTGATGGTCTTG 165954 Query 134685 CCGGT 134689 ||||| Sbjct 165953 CCGGT 165949 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || || || ||||| || |||||||||||| Sbjct 166435 CCACCACGGAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 166376 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || ||||| || ||||| || || |||| ||| || ||||| || || Sbjct 166375 AGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGGGGA 166316 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| ||| | ||||| || ||||| || Sbjct 166315 ATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTGTCAGAGGATTCGACC 166256 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || ||||| Sbjct 166255 TCGAGGGTGATGGTCTTGCCGGT 166233 >seq7 Length=756160 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| |||||||||||| | ||| || || ||||| || Sbjct 415633 GTGCAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGTTG 415574 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || ||||| | ||| || ||||| || || |||||||| || |||||||| || Sbjct 415573 CTTGCCAGCGAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTT 415514 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | |||||| ||| | || || || |||||||| || | ||||| || || ||||| Sbjct 415513 TGATTTGACGTTGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCCGGT 415454 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||| || ||||| |||||||| Sbjct 415453 GAGAGTCTTGACGAAGATTTGCAT 415430 Score = 109 bits (120), Expect = 6e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || ||||||||||| | ||| || ||| || Sbjct 415126 ACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCGTCCTCA 415067 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| || || |||| ||| ||||| ||||| || ||||| || || ||||| Sbjct 415066 AGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGG 415007 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| ||||| || || ||||| ||||| || Sbjct 415006 ATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCAACCTCAAGAGTGATGGTCTTG 414947 Query 134685 CCGGT 134689 ||||| Sbjct 414946 CCGGT 414942 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || || || ||||| || |||||||||||| Sbjct 415428 CCACCACGGAGACGGAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 415369 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || ||||| || ||||| || || |||| ||| || ||||| || || Sbjct 415368 AGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGAGGG 415309 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| ||| | || || || ||||| || Sbjct 415308 ATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTATCAGAAGATTCGACC 415249 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || ||||| Sbjct 415248 TCGAGGGTGATGGTCTTGCCGGT 415226 >seq59 Length=321881 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || ||||||||||| || ||| || ||| || || || || || || || | Sbjct 265768 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 265827 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| ||||||||| || || || || || || || || || || || |||||| || Sbjct 265828 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 265887 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||||||| || || || || || || ||||| || || || | || || |||| Sbjct 265888 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 265947 Query 134704 A 134704 | Sbjct 265948 A 265948 >seq10 Length=717553 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || ||||||||||| || ||| || ||| || || || || || || || | Sbjct 20116 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 20057 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| ||||||||| || || || || || || || || || || || |||||| || Sbjct 20056 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 19997 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||||||| || || || || || || ||||| || || || | || || |||| Sbjct 19996 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 19937 Query 134704 A 134704 | Sbjct 19936 A 19936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505391994075280