Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq153 237 2e-57 seq155 156 6e-33 seq15 111 2e-19 seq75 109 8e-19 >seq153 Length=80566 Score = 237 bits (262), Expect = 2e-57 Identities = 1133/1780 (64%), Gaps = 43/1780 (2%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || ||||| || |||| || || | | || || || || ||||| ||||| |||||| Sbjct 59395 GTGAACTGGATCGGTGCGGTGGCTGCCATGGTGCGGAGGTAATACATGCCGGTCTTCAGA 59454 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || | |||| || ||| ||||| || || | ||| |||| || || Sbjct 59455 CCCAACTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATCGTTGGGTCCTTCATG 59514 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 || || |||||||| || |||||| ||||| || || | ||| || ||||| | | Sbjct 59515 TGGATGTTCATCGACTGGGATTGATCAATGAAGGCACCACGATCAGCAGCCATCTGGACG 59574 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613 || || ||||| || ||||| | ||||| | | ||||| || |||| | Sbjct 59575 ATCGTCCGTTGAGAGATCTCCCAGACCGTCTTGTACAGAGCCTTGATGTCGGCTGGGATA 59634 Query 68614 CTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 | | | || || ||||| ||||| || | || || || || || | ||| | Sbjct 59635 TTGGGGATGTTCTGGATGGAGCCACCCTCAGCGATGATGCGGTTTTTCATGTTGTCAGAC 59694 Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730 || | | ||| | | | | ||||| || || || | ||| ||||| ||| Sbjct 59695 CAGAGACCCATGTCCACGAGATCCTTGAGGAGCCAAGGGTTGACGACTTGGAATTCTCCA 59754 Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790 | | ||| | ||||| |||||| || ||| ||||| || | |||| || ||| Sbjct 59755 GCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGCTCGAAGCATTCGTTGAAGCCC 59814 Query 68791 AGAATTTGAGCAGTTGATG-CAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 68849 ||||| ||| | | || || |||||||||| || ||||| | | | || | | ||| Sbjct 59815 AGAATCTGA-CTGGTGCTGGCAGTTGGCATGGGAGCCACGAGGAGAGAGTTGCGGACACC 59873 Query 68850 ATGTGTTATG--ATTTTAT-CTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAAC 68906 ||| | | || | | |||| || ||| ||||||||| || |||| || || Sbjct 59874 --GTGCTGCGCAATCTGCTGCTTTAAGCTGTC-CCAATCCCAGAGGTCAGTAGGCGTGAC 59930 Query 68907 ATTCCAAAGATCGTATTGTAGAATTCCGTT----ACTTGCATATGATCCATTATATGTTT 68962 | ||| | |||||||| || ||| || ||| || || || | ||||| | Sbjct 59931 ACCCCACATGTCGTATTGGAGCTCTCCCTTCGATACTGGC----GAGCCCTCGTATGTCT 59986 Query 68963 CATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTG 69022 | |||||||| | | | || || ||| ||| | || ||| ||| || | Sbjct 59987 CGTAAGGTCCATGCACCTTGGCAAGCTCAACCGATGCAGTGAGAGCGGCGTGATAGATGG 60046 Query 69023 TTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAATGTAAA 69081 | || || || | ||| ||||| | |||| || || | ||||| || | | | | Sbjct 60047 TCTCAAAGATTTGCTTGTTGAGGTACTTG-GCCTCGGGCGATTCGAAAGGTAAGCGGAGA 60105 Query 69082 AGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTT 69141 || || ||||| || | || ||||| || | | |||| || | ||||| || Sbjct 60106 GCAAGGAACGCATCAGCAAGACCTTGAACACCCACAGCGATGGGGCGATGTCGGAGGTT- 60164 Query 69142 GAACTTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCG 69200 | ||||| ||| ||||||| ||| || ||||| ||||| || || || || || || Sbjct 60165 GCTCTTTCTAGCCTCTGGAACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTCTT 60224 Query 69201 GACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-------TCGTCCATCTA 69253 ||| || |||| ||| || | || || | || || | | || ||| | Sbjct 60225 GACAACGACTTGGCACACCTCGTGAAGCTTCTGGAAGTCGTAGGTGCCGTTGTTCATGTC 60284 Query 69254 TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTG 69313 ||| || | ||| || | ||| || | || || || |||||||||| | | Sbjct 60285 -AACGAAGGTTGGCAGGGCGAGAGAAGCCAAGTTGCAGACAGCTACCTCATCTGGGGCAG 60343 Query 69314 CATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGAT 69373 || | | || ||||| || || || | | ||| || ||||| || | ||| | Sbjct 60344 AGTACTCCACAATTTCTGTGCACAGGTTGGAGCTTCGGATTGTTCCCAGGTTCTTCTGGT 60403 Query 69374 TACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAG 69433 | |||||| ||| || || |||||||| || || || || | || || || | || | Sbjct 60404 TGCTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTCCCGGTCTCGGTTTGGG 60463 Query 69434 ATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTT 69493 |||| || || | ||| | | ||| || || |||||| || ||| ||| Sbjct 60464 CCTCGAGGATGGAGTACCAGAGTTTCTGAGCCTTGATA---GTCTTGCGACCCTTACCTT 60520 Query 69494 TT---TCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 | || |||| ||| | |||| ||||| ||||| || |||| || ||| || Sbjct 60521 CTCTCTCGTATTTCTCGTAGAGAGCC--TCGAACTCATCCCCGTAAACGTCTGCCAGGCC 60578 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 || ||||| || || ||||||| | ||| | | | | || ||| || ||||| || Sbjct 60579 GGGGCATTCGTTGGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTTCATGAA 60638 Query 69609 TAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGT 69668 |||||||||||||| || || |||||||| | | | | ||| || ||||| Sbjct 60639 GAGATCGGGAATCCACAGGGCGTAGAAGAGATCGCGTGCACGAACTTCCTCTTTTCCATG 60698 Query 69669 AttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGC 69728 || ||| || || || ||||| | | ||| | ||||||||| || || || || || Sbjct 60699 GTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGCTCGAGGTAGATGGC 60758 Query 69729 CATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGAC 69788 | ||||||| || || ||||| |||||||| | |||||| || ||||| || |||| Sbjct 60759 AAACGCTCCCGGACGCTTGTTTCCACCCTGATCGACGTATCTTGCGGTGTTGTTGAAGAC 60818 Query 69789 TCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCT 69848 || ||||| || | ||| ||||| || || |||||||| || | || || || | Sbjct 60819 TCGGAGCATGGGCACAATGCCATTGGAGTTTCCATTTGTACCGGCGATGTAGGCCCCGGT 60878 Query 69849 TGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACA 69908 || ||||| | || ||||| || ||||| || | || ||||| | ||||| Sbjct 60879 AGCCCGAATTCTGTGGATGTTGAGACCGATGCCTCCAGCATTCTTTGAGATCATTGCACA 60938 Query 69909 ACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACA 69968 || | ||||| || ||||| || || || || || |||||| | || || || Sbjct 60939 GGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGGAAGCA 60998 Query 69969 GCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAA 70028 || | ||| ||| || || || || | || ||||||||||||||||| Sbjct 60999 TGATGAAAGTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCGTGAGTGAA 61058 Query 70029 CCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAA 70087 |||| || | || |||||||| || ||||| | || ||||| ||| | |||| Sbjct 61059 GAATTTGCTGGACATCAAGTTGTATGTCTCGATAGCCGCCTCGATATCATCACCG-TGAA 61117 Query 70088 TTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127 |||| | || || ||||| | ||| || ||||| || || Sbjct 61118 TTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTC 61157 >seq155 Length=79386 Score = 156 bits (172), Expect = 6e-33 Identities = 381/572 (67%), Gaps = 4/572 (1%) Strand=Plus/Plus Query 69558 ATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGG 69617 ||| || ||||||| | ||| | | | | || ||| || ||||| || |||||||| Sbjct 56684 ATTGGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGG 56743 Query 69618 AATCCAAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttt 69676 |||||| || || || ||| ||||| | | | | ||| || ||||| || ||| Sbjct 56744 AATCCACAGGGCGTAGAAA-AGATCGCGTGCACGAACTTCCTCTTTTCCATGGTTCTTTC 56802 Query 69677 tAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTC 69736 || || || ||||| | | ||| | ||||||||| || || || || || | ||| Sbjct 56803 GGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGCTCGAGGTAAATGGCAAACGCTC 56862 Query 69737 CCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCA 69796 |||| || || ||||| |||||||| | ||||| || ||||| || |||||| |||| Sbjct 56863 CCGGACGCTTGTTTCCACCCTGATCGACATATCTTGCGGTGTTGTTGAAGACTCGGAGCA 56922 Query 69797 TCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAA 69856 | || | ||| ||||| || || |||||||| || | || || || | || |||| Sbjct 56923 TGGGCACAATGCCATTGGAGTTCCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCCGAA 56982 Query 69857 TATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCA 69916 | | || ||||| || ||||| || | || ||||| | ||||| || | Sbjct 56983 TTCTGTGGATGTTGAGACCGATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTA 57042 Query 69917 ATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACA 69976 ||||| || ||||| || || || || || |||||| | || || || || | Sbjct 57043 GCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAA 57102 Query 69977 TTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTT 70036 ||| ||| || || || || | || |||||||| |||||||| |||| Sbjct 57103 GTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCATGAGTGAAGTATTTGC 57162 Query 70037 CAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATC 70095 || | || ||||| || || ||||| | || ||||| ||| | |||||||| | Sbjct 57163 TGGACATCAAGTTGTACGTCTCGATAGCCGCCTCGATATCATCACCG-TGAATTCCAACT 57221 Query 70096 GCGACACGCATCAACATATGCTGAGGTCGTTC 70127 || || ||||| | ||| || ||||| || || Sbjct 57222 GCCACTCGCATGATCATGTGTTGAGGGCGCTC 57253 >seq15 Length=607589 Score = 111 bits (122), Expect = 2e-19 Identities = 291/443 (66%), Gaps = 6/443 (1%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| ||||| || || |||||||| || || || ||||| | | || || || Sbjct 330692 TTTTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATGTTC 330751 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || || || || | || || || | ||| | | | | Sbjct 330752 TCCATGAAGTCGAATGGGTTGGTAGACTTGTAGACCTTCTCGTTTCCGAGGGCAAGGAGC 330811 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCA---TTTCACAATTCATTCCTATG 39502 | | ||| ||||||||||| |||||| ||||| | || | ||||| || | Sbjct 330812 AGACGATCGGCAACAAATTCGATGTATTGCTTCATGAGAGTTGCG---TTCATACCGAGA 330868 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 || | || || ||||| |||| || |||| ||||| || |||||||| || || Sbjct 330869 AGAGCACAAGGAAGGGCCTCGGTTAAGAATTCTTGCTCGATTTCGACGGCCTCGGTGATA 330928 Query 39563 ATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCG 39622 | | | || ||| | || || | ||| || || || | | ||| || Sbjct 330929 ACAGCTTGGACGGCCTGCTTGCTTGGGCGGTGCTTCAAGTGCGAGAAGAGAAGGCAAGCA 330988 Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682 ||||| || ||||||||||| | || || ||||| || || |||||||| ||| Sbjct 330989 AAGTCGGTGTGAAGGCCCTCATCACGCGAGATCAACTCGTTTGAGAAGGTGAGTCCGGGC 331048 Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742 || ||||| ||||| || | ||| || || | ||||| || ||| || ||||| ||| Sbjct 331049 ATCAGACCTCGCTTCTTCAACCAGAAAATAGACGCAAAGGAACCACTGAAAAAGATACCT 331108 Query 39743 TCTACTGCTGCAAATGCAACAAG 39765 || || || |||||||| || || Sbjct 331109 TCGACCGCAGCAAATGCCACGAG 331131 >seq75 Length=245354 Score = 109 bits (120), Expect = 8e-19 Identities = 293/445 (66%), Gaps = 10/445 (2%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| ||||| || || |||||||| || || || ||||| | | || || || Sbjct 39526 TTTTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATGTTC 39467 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || || || || | || || || | | ||| | | || | Sbjct 39466 TCCATGAAGTCGAATGGGTTGGTAGACTTGTAGACCTTCTCATTTCCGAGGGCGAGAAGC 39407 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCA---TTTCACAATTCATTCCTATG 39502 | | ||| |||||||| || |||||| ||||| | || | ||||| || | Sbjct 39406 AGACGATCGGCAACAAACTCGATGTATTGCTTCATTAGAGTTGCG---TTCATACCGAGA 39350 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 || | || || ||||| |||| || |||| ||||| | |||||||| || || Sbjct 39349 AGAGCACAAGGAAGGGCCTCGGTTAAGAATTCTTGCTCGATTTGGACGGCCTCGGTGATA 39290 Query 39563 ATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGG 39620 | || || || ||| | || || | ||| || || || | | ||| | Sbjct 39289 AC--ATCTTGGACGGCCTGCTTGCTTGGACGGTGCTTCAAGTGCGAGAAGAGAAGGCAAG 39232 Query 39621 CGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAG 39680 | ||||| || ||||||||||| | || || ||||| || || |||||||| | Sbjct 39231 CAAAGTCGGTGTGAAGGCCCTCATCACGCGAGATCAACTCGTTTGAGAAGGTGAGTCCGG 39172 Query 39681 GCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGC 39740 |||| ||||| ||||| || | ||| || || | ||||| || ||| || ||||| | Sbjct 39171 GCATCAGACCTCGCTTCTTCAACCAGAAAATAGACGCAAAGGAACCACTGAAAAAGATAC 39112 Query 39741 CTTCTACTGCTGCAAATGCAACAAG 39765 |||| || || |||||||| || || Sbjct 39111 CTTCGACCGCAGCAAATGCCACGAG 39087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686900093430960