Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq153 237 2e-57
seq155 156 6e-33
seq15 111 2e-19
seq75 109 8e-19
>seq153
Length=80566
Score = 237 bits (262), Expect = 2e-57
Identities = 1133/1780 (64%), Gaps = 43/1780 (2%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
|| ||||| || |||| || || | | || || || || ||||| ||||| ||||||
Sbjct 59395 GTGAACTGGATCGGTGCGGTGGCTGCCATGGTGCGGAGGTAATACATGCCGGTCTTCAGA 59454
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493
|| | |||| || ||| ||||| || || | ||| |||| || ||
Sbjct 59455 CCCAACTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATCGTTGGGTCCTTCATG 59514
Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553
|| || |||||||| || |||||| ||||| || || | ||| || ||||| | |
Sbjct 59515 TGGATGTTCATCGACTGGGATTGATCAATGAAGGCACCACGATCAGCAGCCATCTGGACG 59574
Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613
|| || ||||| || ||||| | ||||| | | ||||| || |||| |
Sbjct 59575 ATCGTCCGTTGAGAGATCTCCCAGACCGTCTTGTACAGAGCCTTGATGTCGGCTGGGATA 59634
Query 68614 CTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670
| | | || || ||||| ||||| || | || || || || || | ||| |
Sbjct 59635 TTGGGGATGTTCTGGATGGAGCCACCCTCAGCGATGATGCGGTTTTTCATGTTGTCAGAC 59694
Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730
|| | | ||| | | | | ||||| || || || | ||| ||||| |||
Sbjct 59695 CAGAGACCCATGTCCACGAGATCCTTGAGGAGCCAAGGGTTGACGACTTGGAATTCTCCA 59754
Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790
| | ||| | ||||| |||||| || ||| ||||| || | |||| || |||
Sbjct 59755 GCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGCTCGAAGCATTCGTTGAAGCCC 59814
Query 68791 AGAATTTGAGCAGTTGATG-CAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 68849
||||| ||| | | || || |||||||||| || ||||| | | | || | | |||
Sbjct 59815 AGAATCTGA-CTGGTGCTGGCAGTTGGCATGGGAGCCACGAGGAGAGAGTTGCGGACACC 59873
Query 68850 ATGTGTTATG--ATTTTAT-CTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAAC 68906
||| | | || | | |||| || ||| ||||||||| || |||| || ||
Sbjct 59874 --GTGCTGCGCAATCTGCTGCTTTAAGCTGTC-CCAATCCCAGAGGTCAGTAGGCGTGAC 59930
Query 68907 ATTCCAAAGATCGTATTGTAGAATTCCGTT----ACTTGCATATGATCCATTATATGTTT 68962
| ||| | |||||||| || ||| || ||| || || || | ||||| |
Sbjct 59931 ACCCCACATGTCGTATTGGAGCTCTCCCTTCGATACTGGC----GAGCCCTCGTATGTCT 59986
Query 68963 CATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTG 69022
| |||||||| | | | || || ||| ||| | || ||| ||| || |
Sbjct 59987 CGTAAGGTCCATGCACCTTGGCAAGCTCAACCGATGCAGTGAGAGCGGCGTGATAGATGG 60046
Query 69023 TTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAATGTAAA 69081
| || || || | ||| ||||| | |||| || || | ||||| || | | | |
Sbjct 60047 TCTCAAAGATTTGCTTGTTGAGGTACTTG-GCCTCGGGCGATTCGAAAGGTAAGCGGAGA 60105
Query 69082 AGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTT 69141
|| || ||||| || | || ||||| || | | |||| || | ||||| ||
Sbjct 60106 GCAAGGAACGCATCAGCAAGACCTTGAACACCCACAGCGATGGGGCGATGTCGGAGGTT- 60164
Query 69142 GAACTTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCG 69200
| ||||| ||| ||||||| ||| || ||||| ||||| || || || || || ||
Sbjct 60165 GCTCTTTCTAGCCTCTGGAACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTCTT 60224
Query 69201 GACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-------TCGTCCATCTA 69253
||| || |||| ||| || | || || | || || | | || ||| |
Sbjct 60225 GACAACGACTTGGCACACCTCGTGAAGCTTCTGGAAGTCGTAGGTGCCGTTGTTCATGTC 60284
Query 69254 TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTG 69313
||| || | ||| || | ||| || | || || || |||||||||| | |
Sbjct 60285 -AACGAAGGTTGGCAGGGCGAGAGAAGCCAAGTTGCAGACAGCTACCTCATCTGGGGCAG 60343
Query 69314 CATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGAT 69373
|| | | || ||||| || || || | | ||| || ||||| || | ||| |
Sbjct 60344 AGTACTCCACAATTTCTGTGCACAGGTTGGAGCTTCGGATTGTTCCCAGGTTCTTCTGGT 60403
Query 69374 TACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAG 69433
| |||||| ||| || || |||||||| || || || || | || || || | || |
Sbjct 60404 TGCTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTCCCGGTCTCGGTTTGGG 60463
Query 69434 ATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTT 69493
|||| || || | ||| | | ||| || || |||||| || ||| |||
Sbjct 60464 CCTCGAGGATGGAGTACCAGAGTTTCTGAGCCTTGATA---GTCTTGCGACCCTTACCTT 60520
Query 69494 TT---TCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548
| || |||| ||| | |||| ||||| ||||| || |||| || ||| ||
Sbjct 60521 CTCTCTCGTATTTCTCGTAGAGAGCC--TCGAACTCATCCCCGTAAACGTCTGCCAGGCC 60578
Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608
|| ||||| || || ||||||| | ||| | | | | || ||| || ||||| ||
Sbjct 60579 GGGGCATTCGTTGGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTTCATGAA 60638
Query 69609 TAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGT 69668
|||||||||||||| || || |||||||| | | | | ||| || |||||
Sbjct 60639 GAGATCGGGAATCCACAGGGCGTAGAAGAGATCGCGTGCACGAACTTCCTCTTTTCCATG 60698
Query 69669 AttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGC 69728
|| ||| || || || ||||| | | ||| | ||||||||| || || || || ||
Sbjct 60699 GTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGCTCGAGGTAGATGGC 60758
Query 69729 CATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGAC 69788
| ||||||| || || ||||| |||||||| | |||||| || ||||| || ||||
Sbjct 60759 AAACGCTCCCGGACGCTTGTTTCCACCCTGATCGACGTATCTTGCGGTGTTGTTGAAGAC 60818
Query 69789 TCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCT 69848
|| ||||| || | ||| ||||| || || |||||||| || | || || || |
Sbjct 60819 TCGGAGCATGGGCACAATGCCATTGGAGTTTCCATTTGTACCGGCGATGTAGGCCCCGGT 60878
Query 69849 TGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACA 69908
|| ||||| | || ||||| || ||||| || | || ||||| | |||||
Sbjct 60879 AGCCCGAATTCTGTGGATGTTGAGACCGATGCCTCCAGCATTCTTTGAGATCATTGCACA 60938
Query 69909 ACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACA 69968
|| | ||||| || ||||| || || || || || |||||| | || || ||
Sbjct 60939 GGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGGAAGCA 60998
Query 69969 GCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAA 70028
|| | ||| ||| || || || || | || |||||||||||||||||
Sbjct 60999 TGATGAAAGTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCGTGAGTGAA 61058
Query 70029 CCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAA 70087
|||| || | || |||||||| || ||||| | || ||||| ||| | ||||
Sbjct 61059 GAATTTGCTGGACATCAAGTTGTATGTCTCGATAGCCGCCTCGATATCATCACCG-TGAA 61117
Query 70088 TTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127
|||| | || || ||||| | ||| || ||||| || ||
Sbjct 61118 TTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTC 61157
>seq155
Length=79386
Score = 156 bits (172), Expect = 6e-33
Identities = 381/572 (67%), Gaps = 4/572 (1%)
Strand=Plus/Plus
Query 69558 ATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGG 69617
||| || ||||||| | ||| | | | | || ||| || ||||| || ||||||||
Sbjct 56684 ATTGGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGG 56743
Query 69618 AATCCAAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttt 69676
|||||| || || || ||| ||||| | | | | ||| || ||||| || |||
Sbjct 56744 AATCCACAGGGCGTAGAAA-AGATCGCGTGCACGAACTTCCTCTTTTCCATGGTTCTTTC 56802
Query 69677 tAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTC 69736
|| || || ||||| | | ||| | ||||||||| || || || || || | |||
Sbjct 56803 GGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGCTCGAGGTAAATGGCAAACGCTC 56862
Query 69737 CCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCA 69796
|||| || || ||||| |||||||| | ||||| || ||||| || |||||| ||||
Sbjct 56863 CCGGACGCTTGTTTCCACCCTGATCGACATATCTTGCGGTGTTGTTGAAGACTCGGAGCA 56922
Query 69797 TCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAA 69856
| || | ||| ||||| || || |||||||| || | || || || | || ||||
Sbjct 56923 TGGGCACAATGCCATTGGAGTTCCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCCGAA 56982
Query 69857 TATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCA 69916
| | || ||||| || ||||| || | || ||||| | ||||| || |
Sbjct 56983 TTCTGTGGATGTTGAGACCGATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTA 57042
Query 69917 ATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACA 69976
||||| || ||||| || || || || || |||||| | || || || || |
Sbjct 57043 GCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAA 57102
Query 69977 TTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTT 70036
||| ||| || || || || | || |||||||| |||||||| ||||
Sbjct 57103 GTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCATGAGTGAAGTATTTGC 57162
Query 70037 CAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATC 70095
|| | || ||||| || || ||||| | || ||||| ||| | |||||||| |
Sbjct 57163 TGGACATCAAGTTGTACGTCTCGATAGCCGCCTCGATATCATCACCG-TGAATTCCAACT 57221
Query 70096 GCGACACGCATCAACATATGCTGAGGTCGTTC 70127
|| || ||||| | ||| || ||||| || ||
Sbjct 57222 GCCACTCGCATGATCATGTGTTGAGGGCGCTC 57253
>seq15
Length=607589
Score = 111 bits (122), Expect = 2e-19
Identities = 291/443 (66%), Gaps = 6/443 (1%)
Strand=Plus/Plus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|||||||| ||||| || || |||||||| || || || ||||| | | || || ||
Sbjct 330692 TTTTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATGTTC 330751
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
|||||||| || || || || || | || || || | ||| | | | |
Sbjct 330752 TCCATGAAGTCGAATGGGTTGGTAGACTTGTAGACCTTCTCGTTTCCGAGGGCAAGGAGC 330811
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCA---TTTCACAATTCATTCCTATG 39502
| | ||| ||||||||||| |||||| ||||| | || | ||||| || |
Sbjct 330812 AGACGATCGGCAACAAATTCGATGTATTGCTTCATGAGAGTTGCG---TTCATACCGAGA 330868
Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562
|| | || || ||||| |||| || |||| ||||| || |||||||| || ||
Sbjct 330869 AGAGCACAAGGAAGGGCCTCGGTTAAGAATTCTTGCTCGATTTCGACGGCCTCGGTGATA 330928
Query 39563 ATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCG 39622
| | | || ||| | || || | ||| || || || | | ||| ||
Sbjct 330929 ACAGCTTGGACGGCCTGCTTGCTTGGGCGGTGCTTCAAGTGCGAGAAGAGAAGGCAAGCA 330988
Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682
||||| || ||||||||||| | || || ||||| || || |||||||| |||
Sbjct 330989 AAGTCGGTGTGAAGGCCCTCATCACGCGAGATCAACTCGTTTGAGAAGGTGAGTCCGGGC 331048
Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742
|| ||||| ||||| || | ||| || || | ||||| || ||| || ||||| |||
Sbjct 331049 ATCAGACCTCGCTTCTTCAACCAGAAAATAGACGCAAAGGAACCACTGAAAAAGATACCT 331108
Query 39743 TCTACTGCTGCAAATGCAACAAG 39765
|| || || |||||||| || ||
Sbjct 331109 TCGACCGCAGCAAATGCCACGAG 331131
>seq75
Length=245354
Score = 109 bits (120), Expect = 8e-19
Identities = 293/445 (66%), Gaps = 10/445 (2%)
Strand=Plus/Minus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|||||||| ||||| || || |||||||| || || || ||||| | | || || ||
Sbjct 39526 TTTTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATGTTC 39467
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
|||||||| || || || || || | || || || | | ||| | | || |
Sbjct 39466 TCCATGAAGTCGAATGGGTTGGTAGACTTGTAGACCTTCTCATTTCCGAGGGCGAGAAGC 39407
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCA---TTTCACAATTCATTCCTATG 39502
| | ||| |||||||| || |||||| ||||| | || | ||||| || |
Sbjct 39406 AGACGATCGGCAACAAACTCGATGTATTGCTTCATTAGAGTTGCG---TTCATACCGAGA 39350
Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562
|| | || || ||||| |||| || |||| ||||| | |||||||| || ||
Sbjct 39349 AGAGCACAAGGAAGGGCCTCGGTTAAGAATTCTTGCTCGATTTGGACGGCCTCGGTGATA 39290
Query 39563 ATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGG 39620
| || || || ||| | || || | ||| || || || | | ||| |
Sbjct 39289 AC--ATCTTGGACGGCCTGCTTGCTTGGACGGTGCTTCAAGTGCGAGAAGAGAAGGCAAG 39232
Query 39621 CGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAG 39680
| ||||| || ||||||||||| | || || ||||| || || |||||||| |
Sbjct 39231 CAAAGTCGGTGTGAAGGCCCTCATCACGCGAGATCAACTCGTTTGAGAAGGTGAGTCCGG 39172
Query 39681 GCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGC 39740
|||| ||||| ||||| || | ||| || || | ||||| || ||| || ||||| |
Sbjct 39171 GCATCAGACCTCGCTTCTTCAACCAGAAAATAGACGCAAAGGAACCACTGAAAAAGATAC 39112
Query 39741 CTTCTACTGCTGCAAATGCAACAAG 39765
|||| || || |||||||| || ||
Sbjct 39111 CTTCGACCGCAGCAAATGCCACGAG 39087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686900093430960
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