Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq75 89.7 2e-12
seq15 89.7 2e-12
>seq75
Length=245354
Score = 89.7 bits (98), Expect = 2e-12
Identities = 123/171 (72%), Gaps = 1/171 (1%)
Strand=Plus/Plus
Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
||||| | | || || || || ||||||| ||||||||| | || || || || |||
Sbjct 39074 CTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTT 39133
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
| || || || ||||||||||| ||||| || || |||| ||| || ||||| ||||
Sbjct 39134 T-GCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACG 39192
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
| ||||| || || ||||| | || |||||| || || |||||||
Sbjct 39193 AGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCT 39243
>seq15
Length=607589
Score = 89.7 bits (98), Expect = 2e-12
Identities = 123/171 (72%), Gaps = 1/171 (1%)
Strand=Plus/Minus
Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
||||| | | || || || || ||||||| ||||||||| | || || || || |||
Sbjct 331144 CTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTT 331085
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
| || || || ||||||||||| ||||| || || |||| ||| || ||||| ||||
Sbjct 331084 T-GCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACG 331026
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
| ||||| || || ||||| | || |||||| || || |||||||
Sbjct 331025 AGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCT 330975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588315364537230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |