Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq75 89.7 2e-12 seq15 89.7 2e-12 >seq75 Length=245354 Score = 89.7 bits (98), Expect = 2e-12 Identities = 123/171 (72%), Gaps = 1/171 (1%) Strand=Plus/Plus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||||| | | || || || || ||||||| ||||||||| | || || || || ||| Sbjct 39074 CTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTT 39133 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | || || || ||||||||||| ||||| || || |||| ||| || ||||| |||| Sbjct 39134 T-GCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACG 39192 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 | ||||| || || ||||| | || |||||| || || ||||||| Sbjct 39193 AGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCT 39243 >seq15 Length=607589 Score = 89.7 bits (98), Expect = 2e-12 Identities = 123/171 (72%), Gaps = 1/171 (1%) Strand=Plus/Minus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||||| | | || || || || ||||||| ||||||||| | || || || || ||| Sbjct 331144 CTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTT 331085 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | || || || ||||||||||| ||||| || || |||| ||| || ||||| |||| Sbjct 331084 T-GCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACG 331026 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 | ||||| || || ||||| | || |||||| || || ||||||| Sbjct 331025 AGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCT 330975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588315364537230