Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq153 268 1e-66
seq155 154 2e-32
seq75 109 7e-19
seq15 109 7e-19
>seq153
Length=80566
Score = 268 bits (296), Expect = 1e-66
Identities = 1191/1847 (64%), Gaps = 53/1847 (3%)
Strand=Plus/Plus
Query 110331 TGAACTGAATTGGT-CGG--GCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGA 110387
||||||| || ||| ||| ||| ||| | | ||||| || ||||| |||||||| |
Sbjct 59396 TGAACTGGATCGGTGCGGTGGCT---GCCATGGTGCGGAGGTAATACATGCCGGTCTTCA 59452
Query 110388 GTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCA 110447
| || ||||| | | ||||| | || |||| ||||||||| | ||
Sbjct 59453 GACCCAACTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATCGTTGGGTCCTTCA 59512
Query 110448 TGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATC 110505
|| || |||||| ||| || ||| ||||||||| || || | || ||||| |
Sbjct 59513 TGTGGATGTTCATCGACTGGGA--TTGATCAATGAAGGCACCACGATCAGCAGCCATCTG 59570
Query 110506 AATGA-CATCCTTCATCTTA-ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCT 110563
| || | ||| | | | || ||||| || || || ||| |||||| || ||
Sbjct 59571 GACGATCGTCCGT--TGAGAGATCTCCCAGACCGTCTTGTACAGAGCCTTGATGTCGGCT 59628
Query 110564 GGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCC 110623
||||||| | ||| ||||||||||| || ||| | | ||| | | ||||| |
Sbjct 59629 GGGATATTGGGGATGTTCTGGATGGAGCCACCCTCAGCGATGATGCGGTTTTTCATGTTG 59688
Query 110624 TTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAAC 110683
| ||||||||||| || | | ||| || |||| ||| |||||| | ||
Sbjct 59689 TCAGACCAGAGACCCATGTCCACGAGATCCTTGAGGAGCCAAGGGTTGACGACTTGGAAT 59748
Query 110684 TCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTA 110743
|| || || || | | ||| ||||| | |||||||| || |||||||| ||
Sbjct 59749 TCTCCAGCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGCTCGAAGCATTCGTTG 59808
Query 110744 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 110803
|||| || || |||| ||| |||||||| || |||| | ||| ||| ||
Sbjct 59809 AAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCATGGGAGCCACGAGGAGAGAGTTGCGG 59868
Query 110804 AGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTG--AGCTTGGTTT 110861
| ||| | || | || | | ||| | ||||| || || | || | || |
Sbjct 59869 ACACCGTGCTGCGCAATCTGCTGCTTTAAGCTGTCCCAATCCCAGAGGTCAG-TAGGCGT 59927
Query 110862 CACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTT 110921
|| |||||||||| | || ||| | || | || | || || ||||| | || |
Sbjct 59928 GACAC-CCCACATGTCGTATTGGAGCTCTCCCTTCGATACTGGCGAGCCCTCGTATGTCT 59986
Query 110922 CATAGGAACCTTGGGCTTCAGCCAATTCA-CAGCTCGCCTCCAGGGATGCGTGATACATG 110980
| || | || || | | || | ||| | | | || || | |||||||| |||
Sbjct 59987 CGTAAGGTCCATGCACCTTGGCAAGCTCAACCGAT-GCAGTGAGAGCGGCGTGATAGATG 60045
Query 110981 GTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCAC 111040
|| |||||||| | || | | |||||| || || || || | |||||
Sbjct 60046 GTCTCAAAGATTTGCTTGTTGAGGTACTTGGCCTCGGGCGATTCGAAAGGTAAGCGGAGA 60105
Query 111041 AAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTA 111100
|| || |||| || |||||||||||||||| | | || || | ||||| | ||
Sbjct 60106 GCAAGGAACGCATCAGCAAGACCTTGAACACCCACAGCGATGGGGCGATGTCGGAGGTTG 60165
Query 111101 GACTTTCGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 111159
||||| || ||| ||| || || |||| | || |||| ||| || || ||
Sbjct 60166 CTCTTTCTAGCC-TCTGGAACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTCTT 60224
Query 111160 GGTAACAATCTTTGTG-ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT 111218
| ||| | ||| | | || ||||| || | | || | |||| || | |||||
Sbjct 60225 GACAACGA-CTTGGCACACCTCGTGAAGCTTCTGGAAGTCGTAGGTGCC-GT-TGTTCAT 60281
Query 111219 TG--ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC 111276
|| | |||| ||||||| || ||||| ||||| ||||| |||||| |
Sbjct 60282 GTCAACGAAGGTTGGCAGGGCGAGAGAAGCCAAGTTGCAGACAGCTACCTCATCTGGGGC 60341
Query 111277 TGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 111336
| |||||| | ||||||||| || | |||||| || || || |||| ||||| ||
Sbjct 60342 AGAGTACTCCACAATTTCTGTGCACAGGTTGGAGCTTCGGATTGTTCCCAGGTTCTTCTG 60401
Query 111337 GTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 111396
||| ||||| |||||| |||||||||||||||||| |||| |||| ||||| || ||
Sbjct 60402 GTTGCTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTCCCGGTCTCGGTTTG 60461
Query 111397 TGATTTGAGAATAGCCTTCCA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCC 111454
| | ||| || | | ||| | || | | | || || | || | ||| | ||
Sbjct 60462 GGCCTCGAGGATGGAGTACCAGAGTTTCTGAGCCTTGATAGTCTTGC---GACCCTTACC 60518
Query 111455 TCCGC-CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACC 111513
| | | |||||| || |||||| || || ||||| || || |||| | || ||
Sbjct 60519 TTCTCTCTCGTATTTCTCGTAGAGAGCCTCGAACTCATCCCCGTAAACGTCTGCCAGGCC 60578
Query 111514 TGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGA 111572
|| || || || || || | |||| ||| | || | |||||| ||||||||||
Sbjct 60579 -GGGGCATTCGTTGGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTTCATGA 60637
Query 111573 AAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCT 111631
| || || ||||||||||||| | |||||||| | | || ||| | || || | ||
Sbjct 60638 AGAGATCGGGAATCCACAGGGCGTAGAAGAGATCGCGTGCA-CGAACTTCCTCTTTTCCA 60696
Query 111632 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 111691
||||| ||| | ||||||||||| | || |||||| ||||||||||| || ||||
Sbjct 60697 TGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGCTCGAGGTAGATG 60756
Query 111692 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 111745
|| | | |||| ||||| ||| | |||| || || | || ||| |||
Sbjct 60757 GCAAACGCTCCC---GGACGCTTGTTTCCACCCTGATCGACGTATCTTGCGGTGTTGTTG 60813
Query 111746 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT 111805
|| || || ||||| || | ||| |||| || | |||||||| || || |
Sbjct 60814 AAGACTCGGAGCATGGGCACAATGCCATTGGAGTTTCCATTTGTACCGGCGATGTAGGCC 60873
Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865
| || | | ||||||| | || || || ||||| |||||||||
Sbjct 60874 CCGGTAGCCCGAATTCTGTGGATGTTGAGACCGATGCCTCCAGCATTCTTTGAGATCATT 60933
Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925
||||| | | || || | |||||||||| || ||||||||| || |||| |||
Sbjct 60934 GCACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGG 60993
Query 111926 AAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG 111984
||||| || | || || || ||| ||||| || |||||| || || | ||||||
Sbjct 60994 AAGCATGATGAAAGTTG-GGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCGTG 61052
Query 111985 AATGAACA--TACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 112042
| |||| | | || ||||||| || ||||||||| | | | || || || ||
Sbjct 61053 AGTGAAGAATTTGCT--GGACATCAAGTTGTATGTCTCGATAGCCGCCTCGATATCATCA 61110
Query 112043 CCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCA 112102
||||| || || | ||| || ||||||| ||||| || ||| || | |||||
Sbjct 61111 CCGTGAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTCAGCAACCTTGCCA 61170
Query 112103 TCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
||||| ||| |||| || | ||| ||||| |||| ||||||||
Sbjct 61171 TCGAGGCGTAGAAGGTATGACCGCTCCAGGGTCTTGAATCCAAAGTA 61217
>seq155
Length=79386
Score = 154 bits (170), Expect = 2e-32
Identities = 402/604 (67%), Gaps = 17/604 (3%)
Strand=Plus/Plus
Query 111556 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACC 111614
|||||| ||||||||||| || || ||||||||||||| | || ||||| | | || |
Sbjct 56717 CTCAACACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAAAGATCGCGTGCA-C 56775
Query 111615 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 111674
|| | || || | || ||||| ||| | ||||||||||| | || |||||| ||||
Sbjct 56776 GAACTTCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCC 56835
Query 111675 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACAT 111728
||||||| || || | || | | |||| ||||| ||| | |||| ||||
Sbjct 56836 ATGGCTCGAGGTAAATGGCAAACGCTCCC---GGACGCTTGTTTCCACCCTGATCGACAT 56892
Query 111729 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 111788
| | || ||| ||| || || || ||||| || | ||| |||| || | |||||||
Sbjct 56893 ATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAGTTCCCATTTG 56952
Query 111789 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 111848
| || || | | || | | ||||||| | || || || ||||
Sbjct 56953 TACCGGCGATGTAGGCCCCGGTAGCCCGAATTCTGTGGATGTTGAGACCGATGCCTCCAG 57012
Query 111849 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 111908
| ||||||||| ||||| | | || || | |||||||||| || |||||
Sbjct 57013 CATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCT 57072
Query 111909 CCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAG 111967
|||| || |||| |||||||| || | || || || ||| ||||| || ||||
Sbjct 57073 CCTTCATGTCGATCAGGAAGCATGATGAAAGTTG-GGCCTGTGGGGTACCGGCCGAGAAG 57131
Query 111968 AGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGA 112025
|| || || | ||| ||| |||| || ||| ||||||| || ||| ||||| |
Sbjct 57132 AGAGTGGGAGATGCATGAGTGAA-GTA-TTTGCTGGACATCAAGTTGTACGTCTCGATAG 57189
Query 112026 CAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGG 112085
| | || || || || ||||| || || | ||| || ||||||| ||||| || |||
Sbjct 57190 CCGCCTCGATATCATCACCGTGAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGC 57249
Query 112086 TTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAA 112145
|| | |||||||||| ||| |||| || | ||| ||||| |||| ||||
Sbjct 57250 GCTCAGCAACTTTGCCATCGAGGCGTAGAAGGTATGACCGCTCCAGGGTCTTGAATCCAA 57309
Query 112146 AGTA 112149
||||
Sbjct 57310 AGTA 57313
>seq75
Length=245354
Score = 109 bits (120), Expect = 7e-19
Identities = 161/223 (72%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| || |||||||| || || || | || ||||||||| || ||
Sbjct 39232 GCAAAGTCGGTGTGAAGGCCCTCATCACGCGAGATCAACTCGTTTGAGAAGGTGAGTCCG 39173
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777
||||| ||||| |||||||||||||| |||||| |||| || || || ||| |||||
Sbjct 39172 GGCATCAGACCTCGCTTCTTCAACCAGAAAATAGACGCA-AAGGAACCACTGAAAAAGAT 39114
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAA 122836
||| || || ||||| || | || |||| |||||||| || | ||| | | ||
Sbjct 39113 ACCTTCGACCGCAGCAAATGCCACGAGACGTTGGGCGAAGGTAGAG-TTCTTGTCCTGAA 39055
Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 122879
|||| | | |||||| | |||||||||| ||| || || ||
Sbjct 39054 TCCATCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAGGGAAC 39012
>seq15
Length=607589
Score = 109 bits (120), Expect = 7e-19
Identities = 161/223 (72%), Gaps = 4/223 (2%)
Strand=Plus/Plus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| || |||||||| || || || | || ||||||||| || ||
Sbjct 330986 GCAAAGTCGGTGTGAAGGCCCTCATCACGCGAGATCAACTCGTTTGAGAAGGTGAGTCCG 331045
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777
||||| ||||| |||||||||||||| |||||| |||| || || || ||| |||||
Sbjct 331046 GGCATCAGACCTCGCTTCTTCAACCAGAAAATAGACGCA-AAGGAACCACTGAAAAAGAT 331104
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAA 122836
||| || || ||||| || | || |||| |||||||| || | ||| | | ||
Sbjct 331105 ACCTTCGACCGCAGCAAATGCCACGAGACGTTGGGCGAAGGTAGAG-TTCTTGTCCTGAA 331163
Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 122879
|||| | | |||||| | |||||||||| ||| || || ||
Sbjct 331164 TCCATCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAAC 331206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628024039694400
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