Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq153 268 1e-66 seq155 154 2e-32 seq75 109 7e-19 seq15 109 7e-19 >seq153 Length=80566 Score = 268 bits (296), Expect = 1e-66 Identities = 1191/1847 (64%), Gaps = 53/1847 (3%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGT-CGG--GCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGA 110387 ||||||| || ||| ||| ||| ||| | | ||||| || ||||| |||||||| | Sbjct 59396 TGAACTGGATCGGTGCGGTGGCT---GCCATGGTGCGGAGGTAATACATGCCGGTCTTCA 59452 Query 110388 GTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCA 110447 | || ||||| | | ||||| | || |||| ||||||||| | || Sbjct 59453 GACCCAACTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATCGTTGGGTCCTTCA 59512 Query 110448 TGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATC 110505 || || |||||| ||| || ||| ||||||||| || || | || ||||| | Sbjct 59513 TGTGGATGTTCATCGACTGGGA--TTGATCAATGAAGGCACCACGATCAGCAGCCATCTG 59570 Query 110506 AATGA-CATCCTTCATCTTA-ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCT 110563 | || | ||| | | | || ||||| || || || ||| |||||| || || Sbjct 59571 GACGATCGTCCGT--TGAGAGATCTCCCAGACCGTCTTGTACAGAGCCTTGATGTCGGCT 59628 Query 110564 GGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCC 110623 ||||||| | ||| ||||||||||| || ||| | | ||| | | ||||| | Sbjct 59629 GGGATATTGGGGATGTTCTGGATGGAGCCACCCTCAGCGATGATGCGGTTTTTCATGTTG 59688 Query 110624 TTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAAC 110683 | ||||||||||| || | | ||| || |||| ||| |||||| | || Sbjct 59689 TCAGACCAGAGACCCATGTCCACGAGATCCTTGAGGAGCCAAGGGTTGACGACTTGGAAT 59748 Query 110684 TCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTA 110743 || || || || | | ||| ||||| | |||||||| || |||||||| || Sbjct 59749 TCTCCAGCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGCTCGAAGCATTCGTTG 59808 Query 110744 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 110803 |||| || || |||| ||| |||||||| || |||| | ||| ||| || Sbjct 59809 AAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCATGGGAGCCACGAGGAGAGAGTTGCGG 59868 Query 110804 AGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTG--AGCTTGGTTT 110861 | ||| | || | || | | ||| | ||||| || || | || | || | Sbjct 59869 ACACCGTGCTGCGCAATCTGCTGCTTTAAGCTGTCCCAATCCCAGAGGTCAG-TAGGCGT 59927 Query 110862 CACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTT 110921 || |||||||||| | || ||| | || | || | || || ||||| | || | Sbjct 59928 GACAC-CCCACATGTCGTATTGGAGCTCTCCCTTCGATACTGGCGAGCCCTCGTATGTCT 59986 Query 110922 CATAGGAACCTTGGGCTTCAGCCAATTCA-CAGCTCGCCTCCAGGGATGCGTGATACATG 110980 | || | || || | | || | ||| | | | || || | |||||||| ||| Sbjct 59987 CGTAAGGTCCATGCACCTTGGCAAGCTCAACCGAT-GCAGTGAGAGCGGCGTGATAGATG 60045 Query 110981 GTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCAC 111040 || |||||||| | || | | |||||| || || || || | ||||| Sbjct 60046 GTCTCAAAGATTTGCTTGTTGAGGTACTTGGCCTCGGGCGATTCGAAAGGTAAGCGGAGA 60105 Query 111041 AAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTA 111100 || || |||| || |||||||||||||||| | | || || | ||||| | || Sbjct 60106 GCAAGGAACGCATCAGCAAGACCTTGAACACCCACAGCGATGGGGCGATGTCGGAGGTTG 60165 Query 111101 GACTTTCGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 111159 ||||| || ||| ||| || || |||| | || |||| ||| || || || Sbjct 60166 CTCTTTCTAGCC-TCTGGAACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTCTT 60224 Query 111160 GGTAACAATCTTTGTG-ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT 111218 | ||| | ||| | | || ||||| || | | || | |||| || | ||||| Sbjct 60225 GACAACGA-CTTGGCACACCTCGTGAAGCTTCTGGAAGTCGTAGGTGCC-GT-TGTTCAT 60281 Query 111219 TG--ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC 111276 || | |||| ||||||| || ||||| ||||| ||||| |||||| | Sbjct 60282 GTCAACGAAGGTTGGCAGGGCGAGAGAAGCCAAGTTGCAGACAGCTACCTCATCTGGGGC 60341 Query 111277 TGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 111336 | |||||| | ||||||||| || | |||||| || || || |||| ||||| || Sbjct 60342 AGAGTACTCCACAATTTCTGTGCACAGGTTGGAGCTTCGGATTGTTCCCAGGTTCTTCTG 60401 Query 111337 GTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 111396 ||| ||||| |||||| |||||||||||||||||| |||| |||| ||||| || || Sbjct 60402 GTTGCTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTCCCGGTCTCGGTTTG 60461 Query 111397 TGATTTGAGAATAGCCTTCCA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCC 111454 | | ||| || | | ||| | || | | | || || | || | ||| | || Sbjct 60462 GGCCTCGAGGATGGAGTACCAGAGTTTCTGAGCCTTGATAGTCTTGC---GACCCTTACC 60518 Query 111455 TCCGC-CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACC 111513 | | | |||||| || |||||| || || ||||| || || |||| | || || Sbjct 60519 TTCTCTCTCGTATTTCTCGTAGAGAGCCTCGAACTCATCCCCGTAAACGTCTGCCAGGCC 60578 Query 111514 TGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGA 111572 || || || || || || | |||| ||| | || | |||||| |||||||||| Sbjct 60579 -GGGGCATTCGTTGGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTTCATGA 60637 Query 111573 AAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCT 111631 | || || ||||||||||||| | |||||||| | | || ||| | || || | || Sbjct 60638 AGAGATCGGGAATCCACAGGGCGTAGAAGAGATCGCGTGCA-CGAACTTCCTCTTTTCCA 60696 Query 111632 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 111691 ||||| ||| | ||||||||||| | || |||||| ||||||||||| || |||| Sbjct 60697 TGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGCTCGAGGTAGATG 60756 Query 111692 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 111745 || | | |||| ||||| ||| | |||| || || | || ||| ||| Sbjct 60757 GCAAACGCTCCC---GGACGCTTGTTTCCACCCTGATCGACGTATCTTGCGGTGTTGTTG 60813 Query 111746 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT 111805 || || || ||||| || | ||| |||| || | |||||||| || || | Sbjct 60814 AAGACTCGGAGCATGGGCACAATGCCATTGGAGTTTCCATTTGTACCGGCGATGTAGGCC 60873 Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865 | || | | ||||||| | || || || ||||| ||||||||| Sbjct 60874 CCGGTAGCCCGAATTCTGTGGATGTTGAGACCGATGCCTCCAGCATTCTTTGAGATCATT 60933 Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925 ||||| | | || || | |||||||||| || ||||||||| || |||| ||| Sbjct 60934 GCACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGG 60993 Query 111926 AAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG 111984 ||||| || | || || || ||| ||||| || |||||| || || | |||||| Sbjct 60994 AAGCATGATGAAAGTTG-GGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCGTG 61052 Query 111985 AATGAACA--TACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 112042 | |||| | | || ||||||| || ||||||||| | | | || || || || Sbjct 61053 AGTGAAGAATTTGCT--GGACATCAAGTTGTATGTCTCGATAGCCGCCTCGATATCATCA 61110 Query 112043 CCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCA 112102 ||||| || || | ||| || ||||||| ||||| || ||| || | ||||| Sbjct 61111 CCGTGAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTCAGCAACCTTGCCA 61170 Query 112103 TCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 ||||| ||| |||| || | ||| ||||| |||| |||||||| Sbjct 61171 TCGAGGCGTAGAAGGTATGACCGCTCCAGGGTCTTGAATCCAAAGTA 61217 >seq155 Length=79386 Score = 154 bits (170), Expect = 2e-32 Identities = 402/604 (67%), Gaps = 17/604 (3%) Strand=Plus/Plus Query 111556 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACC 111614 |||||| ||||||||||| || || ||||||||||||| | || ||||| | | || | Sbjct 56717 CTCAACACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAAAGATCGCGTGCA-C 56775 Query 111615 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 111674 || | || || | || ||||| ||| | ||||||||||| | || |||||| |||| Sbjct 56776 GAACTTCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCC 56835 Query 111675 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACAT 111728 ||||||| || || | || | | |||| ||||| ||| | |||| |||| Sbjct 56836 ATGGCTCGAGGTAAATGGCAAACGCTCCC---GGACGCTTGTTTCCACCCTGATCGACAT 56892 Query 111729 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 111788 | | || ||| ||| || || || ||||| || | ||| |||| || | ||||||| Sbjct 56893 ATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAGTTCCCATTTG 56952 Query 111789 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 111848 | || || | | || | | ||||||| | || || || |||| Sbjct 56953 TACCGGCGATGTAGGCCCCGGTAGCCCGAATTCTGTGGATGTTGAGACCGATGCCTCCAG 57012 Query 111849 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 111908 | ||||||||| ||||| | | || || | |||||||||| || ||||| Sbjct 57013 CATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCT 57072 Query 111909 CCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAG 111967 |||| || |||| |||||||| || | || || || ||| ||||| || |||| Sbjct 57073 CCTTCATGTCGATCAGGAAGCATGATGAAAGTTG-GGCCTGTGGGGTACCGGCCGAGAAG 57131 Query 111968 AGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGA 112025 || || || | ||| ||| |||| || ||| ||||||| || ||| ||||| | Sbjct 57132 AGAGTGGGAGATGCATGAGTGAA-GTA-TTTGCTGGACATCAAGTTGTACGTCTCGATAG 57189 Query 112026 CAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGG 112085 | | || || || || ||||| || || | ||| || ||||||| ||||| || ||| Sbjct 57190 CCGCCTCGATATCATCACCGTGAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGC 57249 Query 112086 TTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAA 112145 || | |||||||||| ||| |||| || | ||| ||||| |||| |||| Sbjct 57250 GCTCAGCAACTTTGCCATCGAGGCGTAGAAGGTATGACCGCTCCAGGGTCTTGAATCCAA 57309 Query 112146 AGTA 112149 |||| Sbjct 57310 AGTA 57313 >seq75 Length=245354 Score = 109 bits (120), Expect = 7e-19 Identities = 161/223 (72%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| || |||||||| || || || | || ||||||||| || || Sbjct 39232 GCAAAGTCGGTGTGAAGGCCCTCATCACGCGAGATCAACTCGTTTGAGAAGGTGAGTCCG 39173 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| ||||| |||||||||||||| |||||| |||| || || || ||| ||||| Sbjct 39172 GGCATCAGACCTCGCTTCTTCAACCAGAAAATAGACGCA-AAGGAACCACTGAAAAAGAT 39114 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAA 122836 ||| || || ||||| || | || |||| |||||||| || | ||| | | || Sbjct 39113 ACCTTCGACCGCAGCAAATGCCACGAGACGTTGGGCGAAGGTAGAG-TTCTTGTCCTGAA 39055 Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 122879 |||| | | |||||| | |||||||||| ||| || || || Sbjct 39054 TCCATCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAGGGAAC 39012 >seq15 Length=607589 Score = 109 bits (120), Expect = 7e-19 Identities = 161/223 (72%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| || |||||||| || || || | || ||||||||| || || Sbjct 330986 GCAAAGTCGGTGTGAAGGCCCTCATCACGCGAGATCAACTCGTTTGAGAAGGTGAGTCCG 331045 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| ||||| |||||||||||||| |||||| |||| || || || ||| ||||| Sbjct 331046 GGCATCAGACCTCGCTTCTTCAACCAGAAAATAGACGCA-AAGGAACCACTGAAAAAGAT 331104 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAA 122836 ||| || || ||||| || | || |||| |||||||| || | ||| | | || Sbjct 331105 ACCTTCGACCGCAGCAAATGCCACGAGACGTTGGGCGAAGGTAGAG-TTCTTGTCCTGAA 331163 Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 122879 |||| | | |||||| | |||||||||| ||| || || || Sbjct 331164 TCCATCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAAC 331206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024039694400