Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq153 315 8e-81
seq155 167 3e-36
seq75 120 4e-22
seq15 120 4e-22
>seq153
Length=80566
Score = 315 bits (348), Expect = 8e-81
Identities = 1182/1815 (65%), Gaps = 53/1815 (3%)
Strand=Plus/Minus
Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTC-TTGAT 104214
|| ||||| |||| ||||| ||| | || |||| ||| |||||||| ||| |
Sbjct 61217 TACTTTGGATTCAAGACCCTGGAGCGGTCATACCTTCTACGCCTCGATGGCAAGGTTGCT 61158
Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274
| | ||| || ||||| ||||||| ||||| | || ||||| || || || || ||
Sbjct 61157 G-AGCGCCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGATGATATCGA 61099
Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCA 104332
| | | ||||||||| || ||||||| || | | |||| ||||||| | ||
Sbjct 61098 GGCGGCTATCGAGACATACAACTTGATGTCC--AGCAAATTCTTCACTCACGCATCTCCC 61041
Query 104333 ACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC 104392
|| |||||| || ||||| ||| ||||| | || |||||||| |||| ||
Sbjct 61040 ACTCTCTTCTCGGCCGGTACCCCACAGGCCCAACTTTCATCATGCTTCCTGATCGACATG 60981
Query 104393 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 104452
||||||||| || |||||||||| | || || | | ||||| |||||||||
Sbjct 60980 AAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGACCTGTGCAATGATCTCAAAG 60921
Query 104453 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 104512
||||| || || || | ||||||| | | || | | ||
Sbjct 60920 AATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGGCTACCGGGGCCTACATCGCC 60861
Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572
|| |||||||| | || |||| ||| | || ||||| || || || ||| ||| ||
Sbjct 60860 GGTACAAATGGAAACTCCAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCA 60801
Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626
| || || |||| | ||| ||||| |||| | | || |||| || |||
Sbjct 60800 AGATACGTCGATCAGGGTGGAAACAAGCGTCC---GGGAGCGTTTGCCATCTACCTCGAG 60744
Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686
|||||||| |||||| || | ||||||||||| | || ||||| || | |||||
Sbjct 60743 CCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAA 60684
Query 104687 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745
| || ||| ||||||||||||| ||| || |||||||| ||||||||||||||| | ||
Sbjct 60683 GTTCG-TGCACGCGATCTCTTCTACGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGT 60625
Query 104746 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATG 104804
|||| ||| || | ||| |||| | || || || || || || || || | || |
Sbjct 60624 TGAGAAGAACGGAGACTGGACTCTGATGTGCCCCAACGAATGC-CCCGGCCTGGCAGACG 60566
Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTG 104864
|| || ||||| || || || ||| || |||||| ||||||| || | | |
Sbjct 60565 TTTACGGGGATGAGTTCGAGGCTCTCTACGAGAAATACGAGAGAGAAGGTAAGG-GTC-G 60508
Query 104865 C--GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 104922
| ||| | ||| | | ||| | | || ||| || | ||||||||||| ||
Sbjct 60507 CAAGACTATCAAGGCTCAGAAACTCTGGTACTCCATCCTCGAGGCCCAAACCGAGACCGG 60448
Query 104923 TACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 104982
| || | |||||| ||||| || || || |||| |||||| || || ||||| ||||
Sbjct 60447 GAACCCCTTCATGCTCTACAAGGATGCTTGCAACCGAAAGAGCAACCAGAAGAACCTGGG 60388
Query 104983 TGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 105042
||| || ||||| || || |||||||| |||| | | | | |||||||
Sbjct 60387 AACAATCCGAAGCTCCAACCTGTGCACAGAAATTGTGGAGTACTCTGCCCCAGATGAGGT 60328
Query 105043 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-- 105100
||||| || ||| | || || |||| || || | | || || || |||| |
Sbjct 60327 AGCTGTCTGCAACTTGGCTTCTCTCGCCCTGCCAACCTTCGTTGA--CATGAACAACGGC 60270
Query 105101 ACATTTGATTATGAAAAACTCCACGAAGT-TACGAAAACTGTCACCAAAAACCTAAACAG 105159
|| | || | | || || ||||| || | | || | || ||| ||||| ||||
Sbjct 60269 ACCTACGACTTCCAGAAGCTTCACGAGGTGTGCCAAGTC-GTTGTCAAGAACCTGAACAA 60211
Query 105160 AGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACC 105218
| || |||| |||| ||||| ||| ||| ||| | || || | |||| |
Sbjct 60210 GATCATCGATATCAATTACTACCCTGTTCCAGA-GGCTAGAAAGAGCAACCTCCGACATC 60152
Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCAT 105278
| || || | | | |||||||| ||||| || |||| ||| || | ||| | |
Sbjct 60151 GCCCCATCGCTGTGGGTGTTCAAGGTCTTGCTGATGCGTTCCTTGCTCTCCGCTTACCTT 60092
Query 105279 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCG 105338
| || || ||| || ||| | |||| || || ||||||||||| ||||||||||
Sbjct 60091 TCGAATCGCCCGAGGCCAAGTACCTCAACAAGCAAATCTTTGAGACCATCTATCACGCCG 60032
Query 105339 CTCT---TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395
|||| || || ||| ||| | || |||| |||| || || || || | ||||
Sbjct 60031 CTCTCACTGCATCG-GTT--GAGCTTGCCAAGGTGCATGGACCTTACGAGACATACGAGG 59975
Query 105396 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT-- 105453
| || |||| || | || | ||| |||| || ||||||| || | || | ||
Sbjct 59974 GCTCGCCAGTATCGAAGGGAGAGCTCCAATACGACATGTGGG-GTGTCACGCCTA-CTGA 59917
Query 105454 TCACTACGACTGGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 105512
| || || ||||| |||| | ||| | | || | || | ||| | || ||| ||
Sbjct 59916 CCTCTGGGATTGGGACAGCT-TAAAGCAGCAGATTGCGCAGCACGGTGTCCGCAACTCTC 59858
Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572
||||| ||||||| |||||||| ||| |||| || || |||| || |||||||
Sbjct 59857 TCCTCGTGGCTCCCATGCCAACTGCCAGCACCAGTCAGATTCTGGGCTTCAACGAATGCT 59798
Query 105573 TTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATT 105631
| || || ||||| | ||||| || ||| | | || || ||||| || |
Sbjct 59797 TCGAGCCATACACCTCCAACATTTACTCT-CGTCGTGTGCTGGCTGGAGAATTCCAAGTC 59739
Query 105632 GTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 105691
|||||| ||| | | || ||| || || ||||||||||| | | |||||
Sbjct 59738 GTCAACCCTTGGCTCCTCAAGGATCTCGTGGACATGGGTCTCTGGTCTGACAACATGAAA 59679
Query 105692 GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATT 105751
| | ||| | | |||||| ||||| || || || |||| ||| || ||
Sbjct 59678 AACCGCATCATCGCTGAGGGTGGCTCCATCCAGAACATCCCCAATATCCCAGCCGACATC 59619
Query 105752 AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAA-GGATG-TCATTGACATGGCCG 105809
||| ||||| || || ||||| ||| | || ||| | || | | ||||| |
Sbjct 59618 AAGGCTCTGTACAAGACGGTCTGGGAGATC--TCTCAACGGACGATCGTCCAGATGGCTG 59561
Query 105810 CAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCC 105867
| ||||||||| ||||||||||||| || ||| ||||| || |||| | ||
Sbjct 59560 CTGATCGTGGTGCCTTCATTGATCAA--TCCCAGTCGATGAACATCCACATGAAGGACCC 59503
Query 105868 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 105927
||||||| |||| || | |||||| | | |||||| |||||| || || ||
Sbjct 59502 AACGATGGGCAAGATCACCAGCATGCACTTCACTGGCTGGAAGTTGGGTCTGAAGACCGG 59443
Query 105928 GATGTATTACCTCCG 105942
||||||||||||||
Sbjct 59442 CATGTATTACCTCCG 59428
>seq155
Length=79386
Score = 167 bits (184), Expect = 3e-36
Identities = 417/624 (67%), Gaps = 17/624 (3%)
Strand=Plus/Minus
Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTC-TTGAT 104214
|| ||||| |||| ||||| ||| | || |||| ||| |||||||| ||| |
Sbjct 57313 TACTTTGGATTCAAGACCCTGGAGCGGTCATACCTTCTACGCCTCGATGGCAAAGTTGCT 57254
Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274
| | ||| || ||||| ||||||| ||||| | || ||||| || || || || ||
Sbjct 57253 G-AGCGCCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGATGATATCGA 57195
Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 104332
| | | ||||| ||| || ||||||| ||| || |||| ||| ||| | ||
Sbjct 57194 GGCGGCTATCGAGACGTACAACTTGATGTCCAGCAAA-TAC-TTCACTCATGCATCTCCC 57137
Query 104333 ACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC 104392
|| |||||| || ||||| ||| ||||| | || |||||||| |||| ||
Sbjct 57136 ACTCTCTTCTCGGCCGGTACCCCACAGGCCCAACTTTCATCATGCTTCCTGATCGACATG 57077
Query 104393 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 104452
||||||||| || |||||||||| | || || | | ||||| |||||||||
Sbjct 57076 AAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGACCTGTGCAATGATCTCAAAG 57017
Query 104453 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 104512
||||| || || || | ||||||| | | || | | ||
Sbjct 57016 AATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGGCTACCGGGGCCTACATCGCC 56957
Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572
|| |||||||| | || |||| ||| | || ||||| || || || ||| ||| ||
Sbjct 56956 GGTACAAATGGGAACTCCAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCA 56897
Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626
| ||||| |||| | ||| ||||| |||| | | || | || || |||
Sbjct 56896 AGATATGTCGATCAGGGTGGAAACAAGCGTCC---GGGAGCGTTTGCCATTTACCTCGAG 56840
Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686
|||||||| |||||| || | ||||||||||| | || ||||| || | |||||
Sbjct 56839 CCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAA 56780
Query 104687 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745
| || ||| |||||||| |||| ||| || |||||||| ||||||||||||||| | ||
Sbjct 56779 GTTCG-TGCACGCGATCTTTTCTACGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGT 56721
Query 104746 TGAGGAGAGTGGCAATTGGTCTCT 104769
|||| ||| || | ||| ||||
Sbjct 56720 TGAGAAGAACGGAGACTGGACTCT 56697
>seq75
Length=245354
Score = 120 bits (132), Expect = 4e-22
Identities = 164/224 (73%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792
|||||| || ||| | ||||| || || ||||| | | ||| || | |||| | |
Sbjct 39011 AGTTCCCTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTC 39070
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
| |||| || | || ||| | |||||||| || || |||||||| ||| |||||
Sbjct 39071 -TACCTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTT 39129
Query 94853 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911
|||| |||| |||||| ||| | |||||||||||||| ||||| || ||| ||||||
Sbjct 39130 CCTT-TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCA 39188
Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||| | ||||| ||||| ||||| || ||| || |||||
Sbjct 39189 AACGAGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGC 39232
>seq15
Length=607589
Score = 120 bits (132), Expect = 4e-22
Identities = 164/224 (73%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792
|||||| || ||| | ||||| || || ||||| | | ||| || | |||| | |
Sbjct 331207 AGTTCCTTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTC 331148
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
| |||| || | || ||| | |||||||| || || |||||||| ||| |||||
Sbjct 331147 -TACCTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTT 331089
Query 94853 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911
|||| |||| |||||| ||| | |||||||||||||| ||||| || ||| ||||||
Sbjct 331088 CCTT-TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCA 331030
Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||| | ||||| ||||| ||||| || ||| || |||||
Sbjct 331029 AACGAGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGC 330986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583253407169360
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