Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq153 315 8e-81 seq155 167 3e-36 seq75 120 4e-22 seq15 120 4e-22 >seq153 Length=80566 Score = 315 bits (348), Expect = 8e-81 Identities = 1182/1815 (65%), Gaps = 53/1815 (3%) Strand=Plus/Minus Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTC-TTGAT 104214 || ||||| |||| ||||| ||| | || |||| ||| |||||||| ||| | Sbjct 61217 TACTTTGGATTCAAGACCCTGGAGCGGTCATACCTTCTACGCCTCGATGGCAAGGTTGCT 61158 Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274 | | ||| || ||||| ||||||| ||||| | || ||||| || || || || || Sbjct 61157 G-AGCGCCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGATGATATCGA 61099 Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCA 104332 | | | ||||||||| || ||||||| || | | |||| ||||||| | || Sbjct 61098 GGCGGCTATCGAGACATACAACTTGATGTCC--AGCAAATTCTTCACTCACGCATCTCCC 61041 Query 104333 ACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC 104392 || |||||| || ||||| ||| ||||| | || |||||||| |||| || Sbjct 61040 ACTCTCTTCTCGGCCGGTACCCCACAGGCCCAACTTTCATCATGCTTCCTGATCGACATG 60981 Query 104393 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 104452 ||||||||| || |||||||||| | || || | | ||||| ||||||||| Sbjct 60980 AAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGACCTGTGCAATGATCTCAAAG 60921 Query 104453 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 104512 ||||| || || || | ||||||| | | || | | || Sbjct 60920 AATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGGCTACCGGGGCCTACATCGCC 60861 Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || |||||||| | || |||| ||| | || ||||| || || || ||| ||| || Sbjct 60860 GGTACAAATGGAAACTCCAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCA 60801 Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626 | || || |||| | ||| ||||| |||| | | || |||| || ||| Sbjct 60800 AGATACGTCGATCAGGGTGGAAACAAGCGTCC---GGGAGCGTTTGCCATCTACCTCGAG 60744 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686 |||||||| |||||| || | ||||||||||| | || ||||| || | ||||| Sbjct 60743 CCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAA 60684 Query 104687 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745 | || ||| ||||||||||||| ||| || |||||||| ||||||||||||||| | || Sbjct 60683 GTTCG-TGCACGCGATCTCTTCTACGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGT 60625 Query 104746 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATG 104804 |||| ||| || | ||| |||| | || || || || || || || || | || | Sbjct 60624 TGAGAAGAACGGAGACTGGACTCTGATGTGCCCCAACGAATGC-CCCGGCCTGGCAGACG 60566 Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTG 104864 || || ||||| || || || ||| || |||||| ||||||| || | | | Sbjct 60565 TTTACGGGGATGAGTTCGAGGCTCTCTACGAGAAATACGAGAGAGAAGGTAAGG-GTC-G 60508 Query 104865 C--GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 104922 | ||| | ||| | | ||| | | || ||| || | ||||||||||| || Sbjct 60507 CAAGACTATCAAGGCTCAGAAACTCTGGTACTCCATCCTCGAGGCCCAAACCGAGACCGG 60448 Query 104923 TACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 104982 | || | |||||| ||||| || || || |||| |||||| || || ||||| |||| Sbjct 60447 GAACCCCTTCATGCTCTACAAGGATGCTTGCAACCGAAAGAGCAACCAGAAGAACCTGGG 60388 Query 104983 TGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 105042 ||| || ||||| || || |||||||| |||| | | | | ||||||| Sbjct 60387 AACAATCCGAAGCTCCAACCTGTGCACAGAAATTGTGGAGTACTCTGCCCCAGATGAGGT 60328 Query 105043 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-- 105100 ||||| || ||| | || || |||| || || | | || || || |||| | Sbjct 60327 AGCTGTCTGCAACTTGGCTTCTCTCGCCCTGCCAACCTTCGTTGA--CATGAACAACGGC 60270 Query 105101 ACATTTGATTATGAAAAACTCCACGAAGT-TACGAAAACTGTCACCAAAAACCTAAACAG 105159 || | || | | || || ||||| || | | || | || ||| ||||| |||| Sbjct 60269 ACCTACGACTTCCAGAAGCTTCACGAGGTGTGCCAAGTC-GTTGTCAAGAACCTGAACAA 60211 Query 105160 AGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACC 105218 | || |||| |||| ||||| ||| ||| ||| | || || | |||| | Sbjct 60210 GATCATCGATATCAATTACTACCCTGTTCCAGA-GGCTAGAAAGAGCAACCTCCGACATC 60152 Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCAT 105278 | || || | | | |||||||| ||||| || |||| ||| || | ||| | | Sbjct 60151 GCCCCATCGCTGTGGGTGTTCAAGGTCTTGCTGATGCGTTCCTTGCTCTCCGCTTACCTT 60092 Query 105279 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCG 105338 | || || ||| || ||| | |||| || || ||||||||||| |||||||||| Sbjct 60091 TCGAATCGCCCGAGGCCAAGTACCTCAACAAGCAAATCTTTGAGACCATCTATCACGCCG 60032 Query 105339 CTCT---TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395 |||| || || ||| ||| | || |||| |||| || || || || | |||| Sbjct 60031 CTCTCACTGCATCG-GTT--GAGCTTGCCAAGGTGCATGGACCTTACGAGACATACGAGG 59975 Query 105396 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT-- 105453 | || |||| || | || | ||| |||| || ||||||| || | || | || Sbjct 59974 GCTCGCCAGTATCGAAGGGAGAGCTCCAATACGACATGTGGG-GTGTCACGCCTA-CTGA 59917 Query 105454 TCACTACGACTGGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 105512 | || || ||||| |||| | ||| | | || | || | ||| | || ||| || Sbjct 59916 CCTCTGGGATTGGGACAGCT-TAAAGCAGCAGATTGCGCAGCACGGTGTCCGCAACTCTC 59858 Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572 ||||| ||||||| |||||||| ||| |||| || || |||| || ||||||| Sbjct 59857 TCCTCGTGGCTCCCATGCCAACTGCCAGCACCAGTCAGATTCTGGGCTTCAACGAATGCT 59798 Query 105573 TTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATT 105631 | || || ||||| | ||||| || ||| | | || || ||||| || | Sbjct 59797 TCGAGCCATACACCTCCAACATTTACTCT-CGTCGTGTGCTGGCTGGAGAATTCCAAGTC 59739 Query 105632 GTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 105691 |||||| ||| | | || ||| || || ||||||||||| | | ||||| Sbjct 59738 GTCAACCCTTGGCTCCTCAAGGATCTCGTGGACATGGGTCTCTGGTCTGACAACATGAAA 59679 Query 105692 GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATT 105751 | | ||| | | |||||| ||||| || || || |||| ||| || || Sbjct 59678 AACCGCATCATCGCTGAGGGTGGCTCCATCCAGAACATCCCCAATATCCCAGCCGACATC 59619 Query 105752 AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAA-GGATG-TCATTGACATGGCCG 105809 ||| ||||| || || ||||| ||| | || ||| | || | | ||||| | Sbjct 59618 AAGGCTCTGTACAAGACGGTCTGGGAGATC--TCTCAACGGACGATCGTCCAGATGGCTG 59561 Query 105810 CAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCC 105867 | ||||||||| ||||||||||||| || ||| ||||| || |||| | || Sbjct 59560 CTGATCGTGGTGCCTTCATTGATCAA--TCCCAGTCGATGAACATCCACATGAAGGACCC 59503 Query 105868 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 105927 ||||||| |||| || | |||||| | | |||||| |||||| || || || Sbjct 59502 AACGATGGGCAAGATCACCAGCATGCACTTCACTGGCTGGAAGTTGGGTCTGAAGACCGG 59443 Query 105928 GATGTATTACCTCCG 105942 |||||||||||||| Sbjct 59442 CATGTATTACCTCCG 59428 >seq155 Length=79386 Score = 167 bits (184), Expect = 3e-36 Identities = 417/624 (67%), Gaps = 17/624 (3%) Strand=Plus/Minus Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTC-TTGAT 104214 || ||||| |||| ||||| ||| | || |||| ||| |||||||| ||| | Sbjct 57313 TACTTTGGATTCAAGACCCTGGAGCGGTCATACCTTCTACGCCTCGATGGCAAAGTTGCT 57254 Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274 | | ||| || ||||| ||||||| ||||| | || ||||| || || || || || Sbjct 57253 G-AGCGCCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGATGATATCGA 57195 Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 104332 | | | ||||| ||| || ||||||| ||| || |||| ||| ||| | || Sbjct 57194 GGCGGCTATCGAGACGTACAACTTGATGTCCAGCAAA-TAC-TTCACTCATGCATCTCCC 57137 Query 104333 ACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC 104392 || |||||| || ||||| ||| ||||| | || |||||||| |||| || Sbjct 57136 ACTCTCTTCTCGGCCGGTACCCCACAGGCCCAACTTTCATCATGCTTCCTGATCGACATG 57077 Query 104393 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 104452 ||||||||| || |||||||||| | || || | | ||||| ||||||||| Sbjct 57076 AAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGACCTGTGCAATGATCTCAAAG 57017 Query 104453 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 104512 ||||| || || || | ||||||| | | || | | || Sbjct 57016 AATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGGCTACCGGGGCCTACATCGCC 56957 Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || |||||||| | || |||| ||| | || ||||| || || || ||| ||| || Sbjct 56956 GGTACAAATGGGAACTCCAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCA 56897 Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626 | ||||| |||| | ||| ||||| |||| | | || | || || ||| Sbjct 56896 AGATATGTCGATCAGGGTGGAAACAAGCGTCC---GGGAGCGTTTGCCATTTACCTCGAG 56840 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686 |||||||| |||||| || | ||||||||||| | || ||||| || | ||||| Sbjct 56839 CCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAA 56780 Query 104687 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745 | || ||| |||||||| |||| ||| || |||||||| ||||||||||||||| | || Sbjct 56779 GTTCG-TGCACGCGATCTTTTCTACGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGT 56721 Query 104746 TGAGGAGAGTGGCAATTGGTCTCT 104769 |||| ||| || | ||| |||| Sbjct 56720 TGAGAAGAACGGAGACTGGACTCT 56697 >seq75 Length=245354 Score = 120 bits (132), Expect = 4e-22 Identities = 164/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792 |||||| || ||| | ||||| || || ||||| | | ||| || | |||| | | Sbjct 39011 AGTTCCCTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTC 39070 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 | |||| || | || ||| | |||||||| || || |||||||| ||| ||||| Sbjct 39071 -TACCTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTT 39129 Query 94853 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 |||| |||| |||||| ||| | |||||||||||||| ||||| || ||| |||||| Sbjct 39130 CCTT-TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCA 39188 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||| | ||||| ||||| ||||| || ||| || ||||| Sbjct 39189 AACGAGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGC 39232 >seq15 Length=607589 Score = 120 bits (132), Expect = 4e-22 Identities = 164/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792 |||||| || ||| | ||||| || || ||||| | | ||| || | |||| | | Sbjct 331207 AGTTCCTTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTC 331148 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 | |||| || | || ||| | |||||||| || || |||||||| ||| ||||| Sbjct 331147 -TACCTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTT 331089 Query 94853 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 |||| |||| |||||| ||| | |||||||||||||| ||||| || ||| |||||| Sbjct 331088 CCTT-TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCA 331030 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||| | ||||| ||||| ||||| || ||| || ||||| Sbjct 331029 AACGAGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGC 330986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253407169360