Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq7 170 6e-37
seq96 159 1e-33
seq55 159 1e-33
seq12 87.8 5e-12
seq5 87.8 5e-12
>seq7
Length=756160
Score = 170 bits (188), Expect = 6e-37
Identities = 462/704 (66%), Gaps = 11/704 (2%)
Strand=Plus/Plus
Query 349200 CTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTG 349259
|||||||||| ||||| ||||| || || || || || | | | | | |||| ||
Sbjct 509549 CTATAGGAATTGATTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGAGATGACCGCA 509608
Query 349260 TAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCG 349319
| || || ||||| || || || |||||| |||| ||||| || | |||||| || ||||
Sbjct 509609 TTGAGATCATTGCCAACGACCAGGGTAACCGAACCACGCCCTCCTTCGTTGCCTTCACCG 509668
Query 349320 AAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATA 349379
| || |||||| | || || ||| | || || || || | || || || || |
Sbjct 509669 ATACCGAGCGTCTCATCGGAGATGCCGCCAAGAACCAGGTCGCCATGAACCCGGCCAACA 509728
Query 349380 CGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAA 349435
| || || || || |||||||| |||||| | | || | ||| | || ||
Sbjct 509729 CCGTCTTCGACGCCAAGCGACTCATTGGTCGCAAGTTCGCCGACCCTGAGGTC----CAG 509784
Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495
| || | || || || || || | || | | | | |||| || ||| | |
Sbjct 509785 GCCGACATGAAGCACTTCCCCTTCAAGGTCAT--CGACCGT-GGTGGAAAGCCAGTCGTC 509841
Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555
||||| || | || || || | || ||||| ||||| ||||| || || |||||
Sbjct 509842 GAGGTCGAGTTCAAGGGCGAGAAGAAGCAATTCACCCCCGAGGAAATCTCCTCCATGGTC 509901
Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615
|| || || ||| || | || || ||||| | |||| ||| || | | || |||
Sbjct 509902 TTGGTCAAGATGCGTGAGACCGCCGAGGCATACCTTGGTGGAACCGTCAACAACGCCGTT 509961
Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675
| || || || || || || | || |||||||| || || || || || ||
Sbjct 509962 GTCACCGTCCCCGCATACTTCACCGACTCCCAGCGTCAAGCTACCAAGGACGCCGGTCTG 510021
Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735
||||| || | || ||||| |||| || || || ||||| || || || ||||||||
Sbjct 510022 ATTGCCGGTCTCAACGTTCTCCGAATCATCAACGAGCCCACCGCCGCTGCTATTGCATAC 510081
Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795
|| || || || | | || || || |||| || || ||| | ||||||||
Sbjct 510082 GGTCTCGACAAGAAGGTCGAGGGTGAGCGTAACGTTCTCATCTTCGATCTTGGTGGTGGA 510141
Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855
|| || ||||| || || || || |||| ||||| || || ||||| || | ||||||
Sbjct 510142 ACCTTCGATGTCTCCCTCCTGACCATTGAGGAGGGTATCTTCGAAGTCAAGTCTACTGCT 510201
Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899
||||| || || | || || ||||| || || || ||||| ||
Sbjct 510202 GGTGACACCCACTTGGGAGGTGAAGACTTCGACAACCGTCTTGT 510245
Score = 165 bits (182), Expect = 2e-35
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | ||||| | || || ||||| || ||||| || || || ||
Sbjct 415660 CATACCACCACGAAGACGGAGAACTAAGTGCAGGGTAGATTCCTTTTGGATGTTGTAGTC 415601
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| || ||||| ||||| || ||||| || ||||| || || |||||||| ||||| ||
Sbjct 415600 GGACAAGGTTCGACCATCCTCGAGTTGCTTGCCAGCGAAAATGAGACGTTGTTGATCCGG 415541
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| ||||| ||||| ||||| || | ||| || || || |||| ||| || | |||
Sbjct 415540 GGGAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGATTC 415481
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| | ||||| |||||| ||||| || || || || || || |||||
Sbjct 415480 CACTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 415430
Score = 132 bits (146), Expect = 1e-25
Identities = 156/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||| ||||| | | || ||||| || ||||||||||| || || || || |
Sbjct 415152 TTTGCATACCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGT 415093
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| ||||| | || || || || |||||||| || || || ||||| ||||||||||| |
Sbjct 415092 AGTCAGAGAGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGT 415033
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| |||||||| || || || || || || || | || ||||| || || | || || |
Sbjct 415032 CGGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGG 414973
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
|||||| ||||| || | ||||| |||||
Sbjct 414972 ATTCAACCTCAAGAGTGATGGTCTTGCCGGT 414942
Score = 131 bits (144), Expect = 5e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||| | || || || ||||| || || || || |
Sbjct 415436 TTTGCATACCACCACGGAGACGGAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGT 415377
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| || ||||| || ||||| ||||| |||||||| ||||
Sbjct 415376 AGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGAT 415317
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
||||||| || || || || || || || || | || ||||| || || | |||||| |
Sbjct 415316 CAGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTATCAGAAG 415257
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727
||| || || || || | ||||| ||||| || || || ||||
Sbjct 415256 ATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAA 415212
>seq96
Length=182788
Score = 159 bits (176), Expect = 1e-33
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | ||||| | || |||||||| || ||||| || || || ||
Sbjct 166667 CATACCACCACGAAGACGGAGAACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTC 166608
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| || ||||| ||||| || || || || |||||||| || |||||||| ||||| ||
Sbjct 166607 GGACAAGGTTCGACCATCCTCGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGG 166548
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| ||||| ||||| ||||| || | ||| || || || |||| ||| || | ||
Sbjct 166547 GGGAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTC 166488
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| | ||| | |||||| ||||| || || || || || || |||||
Sbjct 166487 CACTTCCAATGTGATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 166437
Score = 131 bits (144), Expect = 5e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||| | ||||| || ||||| || || || || |
Sbjct 166443 TTTGCATACCACCACGGAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGT 166384
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| || ||||| || ||||| ||||| |||||||| ||||
Sbjct 166383 AGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGAT 166324
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
|||| ||||| || || || || || || || | || ||||| || || | ||||| |
Sbjct 166323 CAGGGGGAATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTGTCAGAGG 166264
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727
||| || || || || | ||||| ||||| || || || ||||
Sbjct 166263 ATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAA 166219
Score = 129 bits (142), Expect = 2e-24
Identities = 155/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||| ||||| | | || ||||| || ||||||||||| || || || || |
Sbjct 166159 TTTGCATACCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGT 166100
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || || || |||||||| || || || ||||| ||||||||||| |
Sbjct 166099 AGTCGGAGAGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGT 166040
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| || || || || || || || | || ||||| || || | ||||| |
Sbjct 166039 CCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGG 165980
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
|||||| ||||| || | ||||| |||||
Sbjct 165979 ATTCAACCTCAAGAGTGATGGTCTTGCCGGT 165949
Score = 118 bits (130), Expect = 3e-21
Identities = 154/212 (73%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
||| |||| || ||||| ||| ||||| || || ||||| || || || |||||
Sbjct 166875 AGACCAAG-TGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCATCC 166817
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| | || || ||||||||||| | || ||||| || || || || ||||| ||||||
Sbjct 166816 TCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTTATCC 166757
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || | || ||||| ||||| | || |||| |||||||| | ||| | ||||
Sbjct 166756 TGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTGTC 166697
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | || || || || ||||||||
Sbjct 166696 TTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665
>seq55
Length=331452
Score = 159 bits (176), Expect = 1e-33
Identities = 483/745 (65%), Gaps = 17/745 (2%)
Strand=Plus/Minus
Query 349200 CTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTG 349259
|||||||||| ||||| ||||| || || || || || | | | | | |||| ||
Sbjct 246043 CTATAGGAATTGATTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGAGATGACCGCA 245984
Query 349260 TAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCG 349319
| || || ||||| || || || |||||| |||| || || || | |||||| || ||||
Sbjct 245983 TTGAGATCATTGCCAACGACCAGGGTAACCGAACCACACCCTCCTTCGTTGCCTTCACCG 245924
Query 349320 AAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATA 349379
| || |||||| | || || ||| | || || || || | || || || || |
Sbjct 245923 ATACCGAGCGTCTCATCGGAGATGCCGCCAAGAACCAGGTCGCCATGAACCCGGCCAACA 245864
Query 349380 CGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAA 349435
| || || || || |||||||| || ||| | | || | ||| | || ||
Sbjct 245863 CTGTCTTCGACGCCAAGCGACTCATCGGTCGCAAGTTCGCCGACCCTGAGGTC----CAG 245808
Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGAT---AAACCAATT 349492
| || | || || || || || | || || ||| ||| | || ||| |
Sbjct 245807 GCCGACATGAAGCACTTCCCCTTCAAGGTCGTC------GACCGTGCTGGCAAGCCAGTC 245754
Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552
| ||||| || | || || || | || ||||| ||||| ||||| || || |||
Sbjct 245753 GTCGAGGTCGAGTTCAAGGGCGAGAAGAAGCAATTCACCCCCGAGGAAATCTCCTCCATG 245694
Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612
|| || || || ||| || | || || |||| | |||| ||| || | | ||
Sbjct 245693 GTCTTGGTCAAGATGCGTGAGACCGCCGAGTCATACCTTGGTGGAACTGTCAACAACGCC 245634
Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672
||| | ||||| || || || || | || |||||||| || || || || || ||
Sbjct 245633 GTTGTCACTGTCCCCGCATACTTCACCGACTCCCAGCGTCAAGCTACCAAGGACGCCGGT 245574
Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732
||||| || | || || || |||| || || || ||||| || || || ||||||
Sbjct 245573 CTGATTGCCGGTCTCAACGTCCTCCGAATCATCAACGAGCCCACCGCCGCTGCTATTGCA 245514
Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792
|| || || || || | | || || || |||| || || ||| | ||||||
Sbjct 245513 TACGGTCTCGACAAGAAGGTCGAGGGTGAGCGTAACGTTCTCATCTTCGATCTTGGTGGT 245454
Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852
|| || || ||||| || || | || |||| ||||| || || ||||| || | |||
Sbjct 245453 GGAACCTTCGATGTCTCCCTCTTGACCATTGAGGAGGGTATCTTCGAAGTCAAGTCTACT 245394
Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912
|||||||| || || | || || || || || || || |||||||| || || ||
Sbjct 245393 GCTGGTGACACTCACTTGGGAGGTGAGGACTTCGACAACCGTCTCGTCAACCACTTCGTA 245334
Query 349913 AAAGAATTTAAGCGTCAAGCTAAAA 349937
|| ||||| || || || |||||
Sbjct 245333 AACGAATTCAAACGCAAATTTAAAA 245309
>seq12
Length=680961
Score = 87.8 bits (96), Expect = 5e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553
||||||||||| ||||| |||||||| || | ||| || | ||| || ||||| ||||||
Sbjct 166818 ACACCAGCAAAATGGAAGGTATTAAGTGTCATTTGCGTGGCGGGTTCTCCAATAGACTGC 166759
Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGC 377594
|| || | || || ||||| |||||||| ||||| | |||
Sbjct 166758 GCAGCGAGGACTCCGACCATCTCTCCAGGGTTGACGAGAGC 166718
>seq5
Length=878710
Score = 87.8 bits (96), Expect = 5e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553
||||||||||| ||||| |||||||| || | ||| || | ||| || ||||| ||||||
Sbjct 157954 ACACCAGCAAAATGGAAGGTATTAAGTGTCATTTGCGTGGCGGGTTCTCCAATAGACTGC 157895
Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGC 377594
|| || | || || ||||| |||||||| ||||| | |||
Sbjct 157894 GCAGCGAGGACTCCGACCATCTCTCCAGGGTTGACGAGAGC 157854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515234714004242
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