Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq153 201 1e-46
seq155 161 1e-34
seq10 120 3e-22
seq75 89.7 6e-13
seq15 89.7 6e-13
>seq153
Length=80566
Score = 201 bits (222), Expect = 1e-46
Identities = 509/760 (67%), Gaps = 28/760 (4%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTAC-ACGCG--TGTCCGTGAGACGT 53249
||||||| || || | || || |||||||| || | | ||| | || ||||| |
Sbjct 61138 TCATGCGAGTGGCAGTTGGAATTCACGGTGATGATATCGAGGCGGCTATC---GAGACAT 61082
Query 53250 ACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309
|| |||| ||| | || | ||| || ||||| | || || || ||| || ||||
Sbjct 61081 ACAACTTGATGTCCAGCAAATTCTTCACTCACGCATCTCCCACTCTCTTCTCGGCCGGTA 61022
Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369
| || | || | || ||||||||| | | |||||||| ||| || ||||
Sbjct 61021 CCCCACAGGCCCAACTTTCATCATGCTTCCTGATCGACATGAAGGAGGACAGTATTGACG 60962
Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429
| |||||||| ||||| ||| ||||| ||||| ||| | || || ||||||
Sbjct 60961 GTATCTACGACACGCTAAAGACCTGTGCAATGATCTCAAAGAATGCTGGAGGCATCGGTC 60902
Query 53430 TCCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487
|| || | | | ||| | || || | ||| | ||| || || || || | |
Sbjct 60901 TCAACATCCACAGAA--TTCGGGCTACCGGGGCCTACATCGCCGGTACAAATGGAAACTC 60844
Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547
| |||| || ||||| |||||||| |||||||||||||| || | |||||| | |||||
Sbjct 60843 CAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCAAGATACGTCGATCAGGG 60784
Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607
||| ||||| ||| |||| ||||||||||||||||| ||||| || || | |
Sbjct 60783 TGGAAACAAGCGTCCGGGAGCGTTTGCCATCTACCTCGAGCCATGGCATGCGGATGTCTT 60724
Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGT 53666
||||| || || || || ||| || || | || || | || ||| || || || |
Sbjct 60723 TGAGTTCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAAGTTCG-TGCACGCGATCTCT 60665
Query 53667 T-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGG 53725
| ||| || ||||||||||| || ||||||||| | || |||||| ||| || |||
Sbjct 60664 TCTAC-GCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGTTGAGAAGAACGGAGACTGG 60606
Query 53726 TACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAAC 53785
||||||||||| ||||| ||||||||||| | || ||||| || ||||| |
Sbjct 60605 ACTCTGATGTGCCCCAACGAATGCCCCGGCCTGGCAGACGTTTACGGGGATGAGTTCGAG 60546
Query 53786 GAGATGTATCGGACGTAC------GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839
| | || || ||| | || | |||| ||| |||| |||||||
Sbjct 60545 GCTCTCTACGAGAAATACGAGAGAGAAGGTAAGGGTCGC------AAGACTATCAAGGCT 60492
Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGA-CGGGAACGCCGTACATGTG 53898
| | | ||| | | |||||| || ||| |||| ||||||| || | ||||
Sbjct 60491 CAGAAACTCTGGTACTCCATCCTCGAGGCCCAAACCGAGACCGGGAAC-CCCTTCATGCT 60433
Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
|||||||||| | |||| ||||||||||||||||||
Sbjct 60432 CTACAAGGATGCTTGCAACCGAAAGAGCAACCAGAAGAAC 60393
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/200 (70%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGAT---TCCACAGAAGAGTCTGATTGACATGA 55784
|||||| | ||| |||||| |||||||| || || || || | | | |||
Sbjct 59620 TCAAGGCTCTGTACAAGACGGTCTGGGAGATCTCTCAACGGACGA---TCGTCCAGATGG 59564
Query 55785 GTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATC 55844
||||||||||||||| | ||| || || |||||||| |||||||| |||| || | |
Sbjct 59563 CTGCTGATCGTGGTGCCTTCATTGATCAATCCCAGTCGATGAACATCCACATGAAGGACC 59504
Query 55845 CTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGG 55904
| | ||| |||| | | | |||||||| || |||||| ||| || ||||| |
Sbjct 59503 CAACGATGGGCAAGATCACCAGCATGCACTTCACTGGCTGGAAGTTGGGTCTGAAGACCG 59444
Query 55905 GTATGTACTATCTGCGGACC 55924
| ||||| || || || |||
Sbjct 59443 GCATGTATTACCTCCGCACC 59424
>seq155
Length=79386
Score = 161 bits (178), Expect = 1e-34
Identities = 377/557 (68%), Gaps = 14/557 (3%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTAC-ACGCG--TGTCCGTGAGACGT 53249
||||||| || || | || || |||||||| || | | ||| | || |||||||
Sbjct 57234 TCATGCGAGTGGCAGTTGGAATTCACGGTGATGATATCGAGGCGGCTATC---GAGACGT 57178
Query 53250 ACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309
|| |||| ||| | || ||||| || || || | || || || ||| || ||||
Sbjct 57177 ACAACTTGATGTCCAGCAAATACTTCACTCATGCATCTCCCACTCTCTTCTCGGCCGGTA 57118
Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369
| || | || | || ||||||||| | | |||||||| ||| || ||||
Sbjct 57117 CCCCACAGGCCCAACTTTCATCATGCTTCCTGATCGACATGAAGGAGGACAGTATTGACG 57058
Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429
| |||||||| ||||| ||| ||||| ||||| ||| | || || ||||||
Sbjct 57057 GTATCTACGACACGCTAAAGACCTGTGCAATGATCTCAAAGAATGCTGGAGGCATCGGTC 56998
Query 53430 TCCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487
|| || | | | ||| | || || | ||| | ||| || || || || | |
Sbjct 56997 TCAACATCCACAGAA--TTCGGGCTACCGGGGCCTACATCGCCGGTACAAATGGGAACTC 56940
Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547
| |||| || ||||| |||||||| |||||||||||||| || | || ||| | |||||
Sbjct 56939 CAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCAAGATATGTCGATCAGGG 56880
Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607
||| ||||| ||| |||| ||||| ||||||||||| ||||| || || | |
Sbjct 56879 TGGAAACAAGCGTCCGGGAGCGTTTGCCATTTACCTCGAGCCATGGCATGCGGATGTCTT 56820
Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGT 53666
||||| || || || || ||| || || | || || | || ||| || || || |
Sbjct 56819 TGAGTTCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAAGTTCG-TGCACGCGATCTTT 56761
Query 53667 T-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGG 53725
| ||| || ||||||||||| || ||||||||| | || |||||| ||| || |||
Sbjct 56760 TCTAC-GCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGTTGAGAAGAACGGAGACTGG 56702
Query 53726 TACCTGATGTGCCCGAA 53742
||||||||||| ||
Sbjct 56701 ACTCTGATGTGCCCCAA 56685
>seq10
Length=717553
Score = 120 bits (132), Expect = 3e-22
Identities = 213/305 (70%), Gaps = 12/305 (4%)
Strand=Plus/Plus
Query 117293 GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGC 117352
|||| ||||| ||||| |||||||||| ||| |||||||| |||| ||||| || |
Sbjct 521919 GGTGACAGGCGGGTGAAGATGTAACGAGGGCTAGCAGCATCGCTGCCTCCAGCTAGTCTA 521978
Query 117353 GTACCGAATTGTCCACTCGGCTCCAAGAG-GTTCAGGTTGTTGGCGCCCACAAAGTTTTG 117411
||||||| ||||||||| || |||| ||| | |||||||| ||||| || || ||
Sbjct 521979 CTACCGAAGCTTCCACTCGGTTC-AAGACAGTTTACGTTGTTGGAACCCACGAAATTCTG 522037
Query 117412 AGCCAAGT----TGACAATCGTAC-CTTGGAGGCTCGCCTCACCATGGTGATACGCCGTC 117466
|| ||| ||| | || | | ||||||| |||||||||||||| || ||
Sbjct 522038 GGC-AAGACCAATGATAGTCTGATTCATGGAGGCA----TCACCATGGTGATAAGCTGTG 522092
Query 117467 TGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTG 117526
| || | | ||| || |||| | | | || || ||||| | || ||| ||||
Sbjct 522093 TTTTCGGAGATGTAACCGGCCAATTCAACAACTTTGGTGTCTCTGATGAGATTCCGCTTG 522152
Query 117527 AGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATC 117586
| ||||| || || || || ||||||| ||||| |||||||| || ||||||
Sbjct 522153 AAACAGGCGTATATAACTTTACGCTGACCAGGCTTGAGACCATCGATGACTGAAGGGATA 522212
Query 117587 GAACG 117591
|||||
Sbjct 522213 GAACG 522217
>seq75
Length=245354
Score = 89.7 bits (98), Expect = 6e-13
Identities = 97/126 (77%), Gaps = 2/126 (2%)
Strand=Plus/Minus
Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843
||||| || || || || | || || ||||| || || |||||||||||||| || ||
Sbjct 39199 ATCAACTCGTTTGAGAAGGTGAGTCCGGGCATCAGACCTCGCTTCTTCAACCAGAAAATA 39140
Query 74844 G-CACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTG 74902
| | || |||||||||||||| ||||| |||||||| ||||| || || || |||||
Sbjct 39139 GACGCA-AAGGAACCACTGAAAAAGATACCTTCGACCGCAGCAAATGCCACGAGACGTTG 39081
Query 74903 CGCGAA 74908
|||||
Sbjct 39080 GGCGAA 39075
>seq15
Length=607589
Score = 89.7 bits (98), Expect = 6e-13
Identities = 97/126 (77%), Gaps = 2/126 (2%)
Strand=Plus/Plus
Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGAT- 74842
||||| || || || || | || || ||||| || || |||||||||||||| || ||
Sbjct 331019 ATCAACTCGTTTGAGAAGGTGAGTCCGGGCATCAGACCTCGCTTCTTCAACCAGAAAATA 331078
Query 74843 GGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTG 74902
| | || |||||||||||||| ||||| |||||||| ||||| || || || |||||
Sbjct 331079 GACGCA-AAGGAACCACTGAAAAAGATACCTTCGACCGCAGCAAATGCCACGAGACGTTG 331137
Query 74903 CGCGAA 74908
|||||
Sbjct 331138 GGCGAA 331143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547209064037200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |