Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq96 109 4e-19
seq7 100 2e-16
>seq96
Length=182788
Score = 109 bits (120), Expect = 4e-19
Identities = 93/115 (81%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 27903 GGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGA 27962
||| ||||| || || || ||||| || || || ||||| || | |||| |||| |||
Sbjct 166778 GGACCAGCAGCGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGCACCTTGAGCGA 166837
Query 27963 TTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017
||||||||||||||| ||||||||| |||| ||||| |||||| | |||||||||
Sbjct 166838 TTACAACATCCAAAAGGAGAGCACTCTGCACTTGGTCTTGCGTCTTCGTGGCGGC 166892
>seq7
Length=756160
Score = 100 bits (110), Expect = 2e-16
Identities = 91/115 (79%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 27903 GGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGA 27962
||| |||||||| || || || || || || ||| | || || | |||| |||| |||
Sbjct 415771 GGACCAGCAACGATTGATCTTCGCTGGTAAGCAACTAGAGGATGGTCGCACCTTGAGCGA 415830
Query 27963 TTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017
||||||||||||||| ||||||||| |||| ||||| |||||| | ||||| |||
Sbjct 415831 TTACAACATCCAAAAGGAGAGCACTCTGCACTTGGTCTTGCGTCTTCGTGGAGGC 415885
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| || || || ||||| || || || |||||| | || || ||| | |
Sbjct 415430 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACAATTACATTGGAAGTGGAATCCTCG 415489
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| |||| |||| |||||| ||| || || || ||||| |||| ||| |
Sbjct 415490 GATACGATCGACAAC--GTCAAATCAAAGATTCAAGATAAGGAAGGCATTCCCCCGGATC 415547
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||||| | ||||| || || || ||| | || || | || | ||||||||| ||||
Sbjct 415548 AACAACGTCTCATTTTCGCTGGCAAGCAACTCGAGGATGGTCGAACCTTGTCCGACTACA 415607
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| || || |||| || ||| | ||| | ||||| ||
Sbjct 415608 ACATCCAAAAGGAATCTACCCTGCACTTAGTTCTCCGTCTTCGTGGTGG 415656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355858002207978
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |