Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq96 109 4e-19 seq7 100 2e-16 >seq96 Length=182788 Score = 109 bits (120), Expect = 4e-19 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 27903 GGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGA 27962 ||| ||||| || || || ||||| || || || ||||| || | |||| |||| ||| Sbjct 166778 GGACCAGCAGCGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGCACCTTGAGCGA 166837 Query 27963 TTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||||||||||||||| ||||||||| |||| ||||| |||||| | ||||||||| Sbjct 166838 TTACAACATCCAAAAGGAGAGCACTCTGCACTTGGTCTTGCGTCTTCGTGGCGGC 166892 >seq7 Length=756160 Score = 100 bits (110), Expect = 2e-16 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 27903 GGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGA 27962 ||| |||||||| || || || || || || ||| | || || | |||| |||| ||| Sbjct 415771 GGACCAGCAACGATTGATCTTCGCTGGTAAGCAACTAGAGGATGGTCGCACCTTGAGCGA 415830 Query 27963 TTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||||||||||||||| ||||||||| |||| ||||| |||||| | ||||| ||| Sbjct 415831 TTACAACATCCAAAAGGAGAGCACTCTGCACTTGGTCTTGCGTCTTCGTGGAGGC 415885 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || || || ||||| || || || |||||| | || || ||| | | Sbjct 415430 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACAATTACATTGGAAGTGGAATCCTCG 415489 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| |||| |||||| ||| || || || ||||| |||| ||| | Sbjct 415490 GATACGATCGACAAC--GTCAAATCAAAGATTCAAGATAAGGAAGGCATTCCCCCGGATC 415547 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | ||||| || || || ||| | || || | || | ||||||||| |||| Sbjct 415548 AACAACGTCTCATTTTCGCTGGCAAGCAACTCGAGGATGGTCGAACCTTGTCCGACTACA 415607 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| || || |||| || ||| | ||| | ||||| || Sbjct 415608 ACATCCAAAAGGAATCTACCCTGCACTTAGTTCTCCGTCTTCGTGGTGG 415656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355858002207978