Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq7 158 3e-33
seq96 154 4e-32
seq102 143 6e-29
seq38 143 6e-29
seq222 125 2e-23
seq153 114 3e-20
seq59 98.7 2e-15
seq10 98.7 2e-15
>seq7
Length=756160
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || ||| | ||| |||||| || ||||||| ||||||||| ||| ||
Sbjct 415879 ACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGT 415820
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| ||||| ||||| ||||||||||| | |||||| ||||| || || || ||
Sbjct 415819 GCGACCATCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCC 415760
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||||||| || || |||||||| | || || |||||
Sbjct 415759 TTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAA 415700
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| || ||||| || || | ||| | |||||
Sbjct 415699 TGTGATTGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658
Score = 154 bits (170), Expect = 4e-32
Identities = 153/198 (77%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||||||||||||||| || || || |||| ||||| || | | |||
Sbjct 415139 ACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGAGT 415080
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || || ||||| || |||||||| || ||||| |||||||| ||||| ||
Sbjct 415079 GCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGGAATGCC 415020
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||||||||| ||| ||| ||||||||||| |||| ||| || || |
Sbjct 415019 CTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCAACCTCAAG 414960
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| |||||||| ||
Sbjct 414959 AGTGATGGTCTTGCCGGT 414942
Score = 127 bits (140), Expect = 5e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || || || || || |||| ||||| |||| || || | |||||
Sbjct 415413 AGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCC 415354
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| ||||||||||| || |||||||| || || || ||||| |||||||||
Sbjct 415353 TCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCT 415294
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| |||||||| || || | ||| || || | ||||| |||
Sbjct 415293 TGGATCTTCGACTTGACATTGTCGATGGTATCAGAAGATTCGACCTCGAGGGTGATGGTC 415234
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 415233 TTGCCGGT 415226
>seq96
Length=182788
Score = 154 bits (170), Expect = 4e-32
Identities = 153/198 (77%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||||||||||||||| || || || |||| ||||| |||| | |||
Sbjct 166146 ACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGT 166087
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || || ||||| || |||||||| || ||||| ||||| || ||||| ||
Sbjct 166086 GCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGGAATGCC 166027
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||||||||| ||| ||| ||||||||||| |||| ||| || || |
Sbjct 166026 CTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGGATTCAACCTCAAG 165967
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| |||||||| ||
Sbjct 165966 AGTGATGGTCTTGCCGGT 165949
Score = 141 bits (156), Expect = 2e-28
Identities = 144/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || || || || || |||| ||||| |||| || || | |||||
Sbjct 166420 AGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCC 166361
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| ||||||||||| || |||||||| || || |||||||| |||||||||
Sbjct 166360 TCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGGGGAATACCCTCCTTGTCT 166301
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| |||| ||| || || | ||||| |||
Sbjct 166300 TGGATCTTCGACTTGACATTGTCGATGGTGTCAGAGGATTCGACCTCGAGGGTGATGGTC 166241
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 166240 TTGCCGGT 166233
>seq102
Length=175646
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| ||||| || || || |||| |||||||||| | || | || |||
Sbjct 56153 AGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCT 56212
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| || ||||| |||||||| || || ||||||||||||
Sbjct 56213 TCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCT 56272
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| || ||| || |||||||| || | ||||| || | ||||| |||
Sbjct 56273 TGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 56332
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||| | || || | ||| | |||||
Sbjct 56333 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 56364
>seq38
Length=423541
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| ||||| || || || |||| |||||||||| | || | || |||
Sbjct 319965 AGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCT 320024
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| || ||||| |||||||| || || ||||||||||||
Sbjct 320025 TCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCT 320084
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| || ||| || |||||||| || | ||||| || | ||||| |||
Sbjct 320085 TGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 320144
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||| | || || | ||| | |||||
Sbjct 320145 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 320176
>seq222
Length=25968
Score = 125 bits (138), Expect = 2e-23
Identities = 185/256 (72%), Gaps = 7/256 (3%)
Strand=Plus/Minus
Query 7467 TTCT-GGTATTAT-AGGTACTATATTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCG 7524
|||| || ||||| ||||||| |||||| | | ||||| |||||||| || ||
Sbjct 23775 TTCTCGGGATTATTAGGTACTGCTTTTTCTGTTTTAATAAGAATAGAATTAAGTGGACCT 23716
Query 7525 GGTTCTCAA-ATATTGAGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGC 7583
||| |||| |||||| | | |||| ||| | || || ||| ||||| || || ||
Sbjct 23715 GGTGTTCAATATATTGCG-GATAAT---CAAGTATATAATAGTATCATTACTGCTCACGC 23660
Query 7584 CTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATT 7643
| | ||||| ||||| || |||||||| | ||||||||| || || || |||| ||
Sbjct 23659 TATATTAATGATATTCTTCTTGGTTATGCCTGCTATGATAGGAGGATTTGGGAATTTCTT 23600
Query 7644 CGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTT 7703
| |||||| | | || | |||||||||||| || || || | || |||||||||||
Sbjct 23599 ATTACCTTTATTAGTAGGGGGTCCTGATATGGCATTCCCTAGATTGAATAATATAAGTTT 23540
Query 7704 TTGATTACTACCGCCT 7719
|||||| |||| |||
Sbjct 23539 CTGATTATTACCACCT 23524
>seq153
Length=80566
Score = 114 bits (126), Expect = 3e-20
Identities = 195/283 (69%), Gaps = 0/283 (0%)
Strand=Plus/Plus
Query 193489 TTCCCGTGTGTTTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCA 193548
||||| || ||||||||| ||||||| | || || ||||||| ||||||||
Sbjct 60386 TTCCCAGGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGT 60445
Query 193549 TGCCCACCTCCGCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCG 193608
| || ||| | ||| || |||| ||| | ||| |||| ||||| || | |||
Sbjct 60446 TCCCGGTCTCGGTTTGGGCCTCGAGGATGGAGTACCAGAGTTTCTGAGCCTTGATAGTCT 60505
Query 193609 TTCTGGCCTTTCCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGA 193668
| | |||| ||||| |||||||| || ||||| || |||| || || | ||||| |
Sbjct 60506 TGCGACCCTTACCTTCTCTCTCGTATTTCTCGTAGAGAGCCTCGAACTCATCCCCGTAAA 60565
Query 193669 TTTCGTCGAGACCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCA 193728
|| | || ||||| ||| || ||||| | ||| |||| ||||| | | || |
Sbjct 60566 CGTCTGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAA 60625
Query 193729 CCCTCTTCATGAAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771
| | |||||||||||| || | |||| | ||||||||| ||
Sbjct 60626 CACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAG 60668
>seq59
Length=321881
Score = 98.7 bits (108), Expect = 2e-15
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| || | | ||| | || || || || ||||| || ||||||||
Sbjct 265770 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 265829
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || ||||| || |||||||| |||||||| || ||| |||
Sbjct 265830 AGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCG 265889
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| ||||| |||| || || || | ||||| |||||||||||
Sbjct 265890 ATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 265933
>seq10
Length=717553
Score = 98.7 bits (108), Expect = 2e-15
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| || | | ||| | || || || || ||||| || ||||||||
Sbjct 20114 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 20055
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || ||||| || |||||||| |||||||| || ||| |||
Sbjct 20054 AGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCG 19995
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| ||||| |||| || || || | ||||| |||||||||||
Sbjct 19994 ATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 19951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192515706783716
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