Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq7 158 3e-33 seq96 154 4e-32 seq102 143 6e-29 seq38 143 6e-29 seq222 125 2e-23 seq153 114 3e-20 seq59 98.7 2e-15 seq10 98.7 2e-15 >seq7 Length=756160 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||| | ||| |||||| || ||||||| ||||||||| ||| || Sbjct 415879 ACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGT 415820 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| ||||| ||||| ||||||||||| | |||||| ||||| || || || || Sbjct 415819 GCGACCATCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCC 415760 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || |||||||| ||||||| || || |||||||| | || || ||||| Sbjct 415759 TTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAA 415700 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || ||||| || || | ||| | ||||| Sbjct 415699 TGTGATTGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658 Score = 154 bits (170), Expect = 4e-32 Identities = 153/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||||||||||||||| || || || |||| ||||| || | | ||| Sbjct 415139 ACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGAGT 415080 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || || ||||| || |||||||| || ||||| |||||||| ||||| || Sbjct 415079 GCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGGAATGCC 415020 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||| ||| ||||||||||| |||| ||| || || | Sbjct 415019 CTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCAACCTCAAG 414960 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 414959 AGTGATGGTCTTGCCGGT 414942 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || || |||| ||||| |||| || || | ||||| Sbjct 415413 AGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCC 415354 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||||||||| || |||||||| || || || ||||| ||||||||| Sbjct 415353 TCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCT 415294 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||||| || || | ||| || || | ||||| ||| Sbjct 415293 TGGATCTTCGACTTGACATTGTCGATGGTATCAGAAGATTCGACCTCGAGGGTGATGGTC 415234 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 415233 TTGCCGGT 415226 >seq96 Length=182788 Score = 154 bits (170), Expect = 4e-32 Identities = 153/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||||||||||||||| || || || |||| ||||| |||| | ||| Sbjct 166146 ACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGT 166087 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || || ||||| || |||||||| || ||||| ||||| || ||||| || Sbjct 166086 GCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGGAATGCC 166027 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||| ||| ||||||||||| |||| ||| || || | Sbjct 166026 CTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGGATTCAACCTCAAG 165967 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 165966 AGTGATGGTCTTGCCGGT 165949 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || || |||| ||||| |||| || || | ||||| Sbjct 166420 AGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCC 166361 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||||||||| || |||||||| || || |||||||| ||||||||| Sbjct 166360 TCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGGGGAATACCCTCCTTGTCT 166301 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| |||| ||| || || | ||||| ||| Sbjct 166300 TGGATCTTCGACTTGACATTGTCGATGGTGTCAGAGGATTCGACCTCGAGGGTGATGGTC 166241 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 166240 TTGCCGGT 166233 >seq102 Length=175646 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| ||||| || || || |||| |||||||||| | || | || ||| Sbjct 56153 AGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCT 56212 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || |||||||| || ||||| |||||||| || || |||||||||||| Sbjct 56213 TCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCT 56272 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || ||| || |||||||| || | ||||| || | ||||| ||| Sbjct 56273 TGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 56332 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || || | ||| | ||||| Sbjct 56333 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 56364 >seq38 Length=423541 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| ||||| || || || |||| |||||||||| | || | || ||| Sbjct 319965 AGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCT 320024 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || |||||||| || ||||| |||||||| || || |||||||||||| Sbjct 320025 TCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCT 320084 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || ||| || |||||||| || | ||||| || | ||||| ||| Sbjct 320085 TGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 320144 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || || | ||| | ||||| Sbjct 320145 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 320176 >seq222 Length=25968 Score = 125 bits (138), Expect = 2e-23 Identities = 185/256 (72%), Gaps = 7/256 (3%) Strand=Plus/Minus Query 7467 TTCT-GGTATTAT-AGGTACTATATTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCG 7524 |||| || ||||| ||||||| |||||| | | ||||| |||||||| || || Sbjct 23775 TTCTCGGGATTATTAGGTACTGCTTTTTCTGTTTTAATAAGAATAGAATTAAGTGGACCT 23716 Query 7525 GGTTCTCAA-ATATTGAGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGC 7583 ||| |||| |||||| | | |||| ||| | || || ||| ||||| || || || Sbjct 23715 GGTGTTCAATATATTGCG-GATAAT---CAAGTATATAATAGTATCATTACTGCTCACGC 23660 Query 7584 CTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATT 7643 | | ||||| ||||| || |||||||| | ||||||||| || || || |||| || Sbjct 23659 TATATTAATGATATTCTTCTTGGTTATGCCTGCTATGATAGGAGGATTTGGGAATTTCTT 23600 Query 7644 CGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTT 7703 | |||||| | | || | |||||||||||| || || || | || ||||||||||| Sbjct 23599 ATTACCTTTATTAGTAGGGGGTCCTGATATGGCATTCCCTAGATTGAATAATATAAGTTT 23540 Query 7704 TTGATTACTACCGCCT 7719 |||||| |||| ||| Sbjct 23539 CTGATTATTACCACCT 23524 >seq153 Length=80566 Score = 114 bits (126), Expect = 3e-20 Identities = 195/283 (69%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 193489 TTCCCGTGTGTTTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCA 193548 ||||| || ||||||||| ||||||| | || || ||||||| |||||||| Sbjct 60386 TTCCCAGGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGT 60445 Query 193549 TGCCCACCTCCGCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCG 193608 | || ||| | ||| || |||| ||| | ||| |||| ||||| || | ||| Sbjct 60446 TCCCGGTCTCGGTTTGGGCCTCGAGGATGGAGTACCAGAGTTTCTGAGCCTTGATAGTCT 60505 Query 193609 TTCTGGCCTTTCCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGA 193668 | | |||| ||||| |||||||| || ||||| || |||| || || | ||||| | Sbjct 60506 TGCGACCCTTACCTTCTCTCTCGTATTTCTCGTAGAGAGCCTCGAACTCATCCCCGTAAA 60565 Query 193669 TTTCGTCGAGACCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCA 193728 || | || ||||| ||| || ||||| | ||| |||| ||||| | | || | Sbjct 60566 CGTCTGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAA 60625 Query 193729 CCCTCTTCATGAAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771 | | |||||||||||| || | |||| | ||||||||| || Sbjct 60626 CACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAG 60668 >seq59 Length=321881 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| || | | ||| | || || || || ||||| || |||||||| Sbjct 265770 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 265829 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || |||||||| |||||||| || ||| ||| Sbjct 265830 AGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCG 265889 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||||| |||| || || || | ||||| ||||||||||| Sbjct 265890 ATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 265933 >seq10 Length=717553 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| || | | ||| | || || || || ||||| || |||||||| Sbjct 20114 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 20055 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || |||||||| |||||||| || ||| ||| Sbjct 20054 AGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCG 19995 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||||| |||| || || || | ||||| ||||||||||| Sbjct 19994 ATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 19951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192515706783716