Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq153 208 1e-48 seq155 147 3e-30 >seq153 Length=80566 Score = 208 bits (230), Expect = 1e-48 Identities = 1107/1744 (63%), Gaps = 43/1744 (2%) Strand=Plus/Plus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 || || || || ||||| || || || ||||||| |||| || ||| |||||||| Sbjct 59425 GTGCGGAGGTAATACATGCCGGTCTTCAGACCCAACTTCCAGCCAGTGAAGTGCATGCTG 59484 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || | ||| | || || || || || ||||||||||| |||||| ||| Sbjct 59485 GTGATCTTGCCCATCGTTGGGTCCTTCATGTGGATGTTCATCGACTGGGATTGATCAATG 59544 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 || || || | |||||| ||||| | | || ||| ||||| || ||||| | || Sbjct 59545 AAGGCACCACGATCAGCAGCCATCTGGACGATCGTCCGTTGAGAGATCTCCCAGACCGTC 59604 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048 ||| | | ||||| || |||| | || | | || || ||||| ||||| || Sbjct 59605 TTGTACAGAGCCTTGATGTCGGCTGGGATATTGGGGATGTTCTGGATGGAGCCACCCTCA 59664 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108 | || || || || || | ||| ||| | | | || | | | | ||| Sbjct 59665 GCGATGATGCGGTTTTTCATGTTGTCAGACCAGAGACCCATGTCCACGAGATCCTTGAGG 59724 Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168 || ||| || || | ||| |||||||||| || || | ||||| |||||| || | Sbjct 59725 AGCCAAGGGTTGACGACTTGGAATTCTCCAGCCAGCACACGACGAGAGTAAATGTTGGAG 59784 Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228 || ||||| || | |||| ||| |||| ||| ||| || ||||||||||| Sbjct 59785 GTGTATGGCTCGAAGCATTCGTTGAAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCATG 59844 Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATG-TGTTCTGATTTTAT-CTTTTAGATATT 77286 || ||||| | | | || | || ||| || || | || | | |||| || | | Sbjct 59845 GGAGCCACGAGGAGAGAGTTGCGGACACCGTGCTGCGCA-ATCTGCTGCTTTAAGCTGTC 59903 Query 77287 TCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTT-- 77344 ||||||||| || || | ||| ||| |||| | |||||||| || ||| || Sbjct 59904 -CCAATCCCAGAGGTCAGTAGGCGTGACACCCCACATGTCGTATTGGAGCTCTCCCTTCG 59962 Query 77345 --ACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAA 77402 ||| || || || | ||||| || |||||||| | | || || ||| | Sbjct 59963 ATACTGGC----GAGCCCTCGTATGTCTCGTAAGGTCCATGCACCTTGGCAAGCTCA--A 60016 Query 77403 CTCGCTTCC---AATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTG 77458 | || | | | || ||| ||| || || || || || | ||| ||||| | |||| Sbjct 60017 C-CGATGCAGTGAGAGCGGCGTGATAGATGGTCTCAAAGATTTGCTTGTTGAGGTACTTG 60075 Query 77459 TGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAAC 77518 || || || || || | | | | || || ||||| || | || ||||| Sbjct 60076 -GCCTCGGGCGATTCGAAAGGTAAGCGGAGAGCAAGGAACGCATCAGCAAGACCTTGAAC 60134 Query 77519 TCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATA 77578 || | | | || || | ||||| ||| || |||| ||||||| ||| || || Sbjct 60135 ACCCACAGCGATGGGGCGATGTCGGAGGTTGCTCTTTCTAGCCTCTGGAACAGGGTAGTA 60194 Query 77579 ATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTT 77638 ||| || || || || || || || || | ||||| |||| ||| || | || || Sbjct 60195 ATTGATATCGATGATCTTGTTCAGGTTCTTGACAACGACTTGGCACACCTCGTGAAGCTT 60254 Query 77639 AAGAAAATCAAATCTTCCATCTATAACA--AAC--ATGTT--CAAAGCTATAGATGCTAG 77692 | || || | | || | | | ||| | ||| || || | ||| || | Sbjct 60255 CTGGAAGTCGTAGGTGCCGTTGTTCATGTCAACGAAGGTTGGCAGGGCGAGAGAAGCCAA 60314 Query 77693 ATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACT 77752 || || || |||||||||| | | | || | | || || || || || || Sbjct 60315 GTTGCAGACAGCTACCTCATCTGGGGCAGAGTACTCCACAATTTCTGTGCACAGGTTGGA 60374 Query 77753 ACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAG 77812 | | ||| || ||||| || | |||||||||||| ||||| | ||||| || || Sbjct 60375 GCTTCGGATTGTTCCCAGGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAGAG 60434 Query 77813 AATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AG 77871 || || || ||||||| || | || | |||| || || | ||||| | ||| || Sbjct 60435 CATGAAGGGGTTCCCGGTCTCGGTTTGGGCCTCGAGGATGGAGTACCAGA-GTTTCTGAG 60493 Query 77872 CTTTTATCATAGATTTGTATCGC---CTCTCTCTTTCATATT--GAGTATATAGCCGTTC 77926 | | | |||| ||| | | | ||||| || |||| ||| | |||| || Sbjct 60494 CCT---TGATAGTCTTGCGACCCTTACCTTCTCTCTCGTATTTCTCGTAGAGAGCC--TC 60548 Query 77927 AAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCA 77986 || ||||| || |||| || ||| || |||||||| || |||||||||| | ||| Sbjct 60549 GAACTCATCCCCGTAAACGTCTGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCA 60608 Query 77987 GTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAG 78046 ||| || | | || ||| || ||||| |||||||| || ||||| || || || || Sbjct 60609 GTCTCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAG 60668 Query 78047 ATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAAT 78106 ||| || | | | ||| || ||||| |||||| || || || ||||| | | Sbjct 60669 ATCGCGTGCACGAACTTCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGAC 60728 Query 78107 ATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTG 78166 ||| | ||||||||| || || || || || | |||| || || || || || ||||| Sbjct 60729 ATCCGCATGCCATGGCTCGAGGTAGATGGCAAACGCTCCCGGACGCTTGTTTCCACCCTG 60788 Query 78167 ATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGT 78226 ||| | ||||| |||||||| || | |||| | ||| || | ||| || || || | Sbjct 60789 ATCGACGTATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAGTT 60848 Query 78227 TCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTAT 78286 ||||||||| || | || || || | || ||||| | ||| | || || Sbjct 60849 TCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCCGAATTCTGTGGATGTTGAGACCGAT 60908 Query 78287 TCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTAT 78346 ||||| || |||| || || | || || || | || ||||||||||| || || Sbjct 60909 GCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTCAAT 60968 Query 78347 ACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGC 78406 |||||| ||| |||||| | || || || || | ||| || || || || Sbjct 60969 ACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGGGTACCGGC 61028 Query 78407 ATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTC 78466 || | || |||||||| || || || |||| || | | |||||||| || Sbjct 61029 CGAGAAGAGAGTGGGAGATGCGTGAGTGAAGAATTTGCTGGACATCAAGTTGTATGTCTC 61088 Query 78467 AATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCT 78525 ||||| | || || || || | |||||||| || || || ||||| | ||| || | Sbjct 61089 GATAGCCGCCTCGATATCATCACCG-TGAATTCCAACTGCCACTCGCATGATCATGTGTT 61147 Query 78526 GAGG 78529 |||| Sbjct 61148 GAGG 61151 >seq155 Length=79386 Score = 147 bits (162), Expect = 3e-30 Identities = 373/565 (66%), Gaps = 2/565 (0%) Strand=Plus/Plus Query 77966 ATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGG 78025 ||| |||||||||| | |||||| || | | || ||| || ||||| |||||||| || Sbjct 56684 ATTGGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGG 56743 Query 78026 TATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTT 78085 ||||| || || || ||||| || | | | ||| || ||||| |||||| Sbjct 56744 AATCCACAGGGCGTAGAAAAGATCGCGTGCACGAACTTCCTCTTTTCCATGGTTCTTTCG 56803 Query 78086 AAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCC 78145 || || || ||||| | | ||| | ||||||||| || || || || || | |||| Sbjct 56804 GAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGCTCGAGGTAAATGGCAAACGCTCC 56863 Query 78146 AGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACAT 78205 || || || || || |||||||| | |||||| |||||||| || | |||| | ||| Sbjct 56864 CGGACGCTTGTTTCCACCCTGATCGACATATCTTGCGGTGTTGTTGAAGACTCGGAGCAT 56923 Query 78206 TGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT 78265 || | ||| || || || | |||||||| || | || || || | || ||||| Sbjct 56924 GGGCACAATGCCATTGGAGTTCCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCCGAAT 56983 Query 78266 ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAA 78325 | ||| | || || ||||| || |||| || || | || || || | Sbjct 56984 TCTGTGGATGTTGAGACCGATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAG 57043 Query 78326 TGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACAT 78385 || ||||||||||| || |||||||| ||| |||||| | || || || || | Sbjct 57044 CGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAG 57103 Query 78386 TTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTC 78445 ||| || || || || || | || ||||||||||| || || |||| Sbjct 57104 TTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCATGAGTGAAGTATTTGCT 57163 Query 78446 AGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCG 78504 || | | ||||| || || ||||| | || || || || | |||||||| || | Sbjct 57164 GGACATCAAGTTGTACGTCTCGATAGCCGCCTCGATATCATCACCG-TGAATTCCAACTG 57222 Query 78505 CTACACGCATCAACATATGCTGAGG 78529 | || ||||| | ||| || ||||| Sbjct 57223 CCACTCGCATGATCATGTGTTGAGG 57247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694659995072960