Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq102 161 2e-34 seq38 161 2e-34 seq96 109 1e-18 seq7 109 1e-18 seq59 98.7 2e-15 seq10 98.7 2e-15 >seq102 Length=175646 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || |||||||| ||||| || |||||||||||||||| | || | Sbjct 56146 GAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCG 56205 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || ||||||||||| || | |||||||| | | ||| ||||| Sbjct 56206 ACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTC 56265 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||||| | || | | |||| ||| ||| || ||||| || Sbjct 56266 CTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGT 56325 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||||||||| ||||| ||||||| |||||| Sbjct 56326 GATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 56364 >seq38 Length=423541 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || |||||||| ||||| || |||||||||||||||| | || | Sbjct 319958 GAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCG 320017 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || ||||||||||| || | |||||||| | | ||| ||||| Sbjct 320018 ACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTC 320077 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||||| | || | | |||| ||| ||| || ||||| || Sbjct 320078 CTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGT 320137 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||||||||| ||||| ||||||| |||||| Sbjct 320138 GATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 320176 >seq96 Length=182788 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || |||||||| || |||||||||||||| |||| || |||| ||||| || || Sbjct 166639 TGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGCTGC 166580 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || || || | || || |||| | || |||||||| |||||||| ||| Sbjct 166579 TTGCCAGCAAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTTT 166520 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 |||||| | || | | || || ||| ||||| | || || || ||||| ||| Sbjct 166519 GATTTGACGTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCTTGCCGGTG 166460 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 |||||||| ||||||| ||||| Sbjct 166459 AGAGTCTTGACGAAGATTTGCAT 166437 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || ||||||||||| || ||||||||||| |||| | ||| | || || Sbjct 166137 GAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTC 166078 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || |||||||| || | |||||||||| | || || ||||| || Sbjct 166077 CTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGGAATGCCCTCCTTGTC 166018 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || |||||| | || | | |||| || || || |||||||| || || Sbjct 166017 TTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGGATTCAACCTCAAGAGTGATGGT 165958 Query 152072 TTTGCCCGTGA 152082 ||||| |||| Sbjct 165957 CTTGCCGGTGA 165947 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| ||| |||||||||||||||||| || || | ||||| || | Sbjct 166871 CAAG-TGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCATCCTCCA 166813 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | | ||||||||||| | ||| |||||||| || || | Sbjct 166812 ACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGA 166753 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | ||||||| ||| ||||| | || || || || | Sbjct 166752 TCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTGTCTTTC 166693 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| ||||||| |||||| Sbjct 166692 CAGTCAAAGTCTTGACGAAGATCTGCAT 166665 >seq7 Length=756160 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || || ||||| || |||||||||||||| |||| || |||| ||||| || || Sbjct 415632 TGCAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGTTGC 415573 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || ||||| || || | || || |||| | || |||||||| |||||||| ||| Sbjct 415572 TTGCCAGCGAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTTT 415513 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 |||||| | || | | || || || ||||| | ||||| || ||||| ||| Sbjct 415512 GATTTGACGTTGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCCGGTG 415453 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 |||||||| ||||||| ||||| Sbjct 415452 AGAGTCTTGACGAAGATTTGCAT 415430 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || ||||||||||| || ||||||||||| || | | ||| | || || Sbjct 415130 GAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCGTC 415071 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || |||||||| || | |||||||| | | || || ||||| || Sbjct 415070 CTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGGAATGCCCTCCTTGTC 415011 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || |||||| | || | | |||| || || || |||||||| || || Sbjct 415010 TTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCAACCTCAAGAGTGATGGT 414951 Query 152072 TTTGCCCGTGA 152082 ||||| |||| Sbjct 414950 CTTGCCGGTGA 414940 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| ||| |||||||||||||||||| || || | ||||| |||| Sbjct 415864 CAAG-TGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCATCCTCTA 415806 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| | | |||||||||| | ||| |||||||| || || | Sbjct 415805 GTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGA 415746 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | ||||||| ||| ||||| | || || || || | Sbjct 415745 TCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTGTCTTTC 415686 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| ||||||| |||||| Sbjct 415685 CAGTCAAGGTCTTGACGAAGATCTGCAT 415658 >seq59 Length=321881 Score = 98.7 bits (108), Expect = 2e-15 Identities = 132/182 (73%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974 || ||||||||||| || | | ||| | || || || || ||||| |||||||||| Sbjct 265770 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTT--CCGGCGAAGA 265827 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | || | ||||||||||| | ||||| ||||| || || || || ||||||| | | Sbjct 265828 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 265887 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | |||| || ||| || ||||| || || || |||||||| || ||||| |||| Sbjct 265888 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 265947 Query 152095 AG 152096 || Sbjct 265948 AG 265949 >seq10 Length=717553 Score = 98.7 bits (108), Expect = 2e-15 Identities = 132/182 (73%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974 || ||||||||||| || | | ||| | || || || || ||||| |||||||||| Sbjct 20114 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTT--CCGGCGAAGA 20057 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | || | ||||||||||| | ||||| ||||| || || || || ||||||| | | Sbjct 20056 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 19997 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | |||| || ||| || ||||| || || || |||||||| || ||||| |||| Sbjct 19996 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 19937 Query 152095 AG 152096 || Sbjct 19936 AG 19935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153805809704394