Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq96 165 2e-35 seq7 159 7e-34 seq59 147 5e-30 seq10 147 5e-30 seq102 145 2e-29 seq38 145 2e-29 seq15 122 2e-22 seq75 104 5e-17 >seq96 Length=182788 Score = 165 bits (182), Expect = 2e-35 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | || || || |||||||||||||| | Sbjct 166436 ACCACCACGGAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 166377 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| ||||| || || || ||||||| ||||||||| ||| || Sbjct 166376 CAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGGGG 166317 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||||||||||||| | || || | ||||| ||||| || | |||||| Sbjct 166316 AATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTGTCAGAGGATTCGAC 166257 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| ||||| || || | ||||| || Sbjct 166256 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 166221 Score = 149 bits (164), Expect = 1e-30 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || || || || | || | || ||| ||||||||||||||||| | Sbjct 166664 ACCACCACGAAGACGGAGAACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 166605 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || || |||||||| || || || || ||||| || | ||||||||| || | Sbjct 166604 CAAG-GTTCGACCATCCTCGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGG 166546 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || ||||| ||||| ||||||| ||| ||| | ||||| || ||||| | || | Sbjct 166545 GAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTCCA 166486 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 166485 CTTCCAATGTGATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 166437 Score = 138 bits (152), Expect = 2e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | || || || |||||||||||||| | Sbjct 166152 ACCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 166093 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| ||||| || || || ||||||| |||||| ||||| || Sbjct 166092 GAGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGG 166033 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||||||||| | || || | ||||| ||||| || | ||| || Sbjct 166032 AATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGGATTCAAC 165973 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || |||||||| ||||| || || Sbjct 165972 CTCAAGAGTGATGGTCTTGCCGGT 165949 Score = 138 bits (152), Expect = 2e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 || ||||| || || | |||| || | ||||| || |||||||||||||| || | Sbjct 166891 CCGCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTC 166832 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| |||||||| | || || || ||||||||||| || || ||||| || Sbjct 166831 AAG-GTGCGACCATCCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGG 166773 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| || |||||||| | || || | || || ||||| || | || || Sbjct 166772 GATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAAC 166713 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||| ||||| || ||||||||||| ||||| |||||||| Sbjct 166712 TTCTAATGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665 >seq7 Length=756160 Score = 159 bits (176), Expect = 7e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | || || || |||||||||||||| | Sbjct 415429 ACCACCACGGAGACGGAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 415370 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| ||||| || || || ||||||| ||||||||| ||| || Sbjct 415369 CAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGAGG 415310 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||||||||| | || || | ||||| || || |||| |||||| Sbjct 415309 GATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTATCAGAAGATTCGAC 415250 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| ||||| || || | ||||| || Sbjct 415249 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 415214 Score = 149 bits (164), Expect = 1e-30 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || || || || | || | || ||| ||||||||||||||||| | Sbjct 415657 ACCACCACGAAGACGGAGAACTAAGTGCAGGGTAGATTCCTTTTGGATGTTGTAGTCGGA 415598 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || || |||||||| ||||| || || || || || | ||||||||| || | Sbjct 415597 CAAG-GTTCGACCATCCTCGAGTTGCTTGCCAGCGAAAATGAGACGTTGTTGATCCGGGG 415539 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || ||||| ||||| ||||||| ||| ||| | ||||| || ||||| | ||| | Sbjct 415538 GAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGATTCCA 415479 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | || || ||||| || || | |||||| ||||| || ||||| Sbjct 415478 CTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 415430 Score = 147 bits (162), Expect = 5e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 || ||||| || || | |||| || | ||||| || |||||||||||||| || | Sbjct 415884 CCTCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTC 415825 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| |||||||||||||| || || || |||||||| ||||| ||||| || Sbjct 415824 AAG-GTGCGACCATCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGG 415766 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| || |||||||| | || || | || || ||||| || | || || Sbjct 415765 GATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAAC 415706 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 415705 TTCTAATGTGATTGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | || || || |||||||||||||||| Sbjct 415145 ACCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 415086 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| ||||| || || || ||||||| |||||| ||||| || Sbjct 415085 GAGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGG 415026 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||||||||| | || || | ||||| ||||| || | ||| || Sbjct 415025 AATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCAAC 414966 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || |||||||| ||||| || || Sbjct 414965 CTCAAGAGTGATGGTCTTGCCGGT 414942 >seq59 Length=321881 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||| ||||| || ||||| ||||| || ||||| |||||| Sbjct 265770 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 265829 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || ||||| ||||| ||||||||||| |||||||| | ||| || | ||| Sbjct 265830 AGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCG 265889 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| || | ||||| || || ||||| ||||| ||||| | ||||| ||||| Sbjct 265890 ATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 265948 >seq10 Length=717553 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||| ||||| || ||||| ||||| || ||||| |||||| Sbjct 20114 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 20055 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || ||||| ||||| ||||||||||| |||||||| | ||| || | ||| Sbjct 20054 AGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCG 19995 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| || | ||||| || || ||||| ||||| ||||| | ||||| ||||| Sbjct 19994 ATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 19936 >seq102 Length=175646 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | || || || ||||||||||| || | Sbjct 56137 ACCTCCACGGAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGA 56196 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| || || || ||||| || ||||| ||||||| ||||| ||||| || Sbjct 56197 AAGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGG 56256 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||||||||| | ||| || | || || ||||| |||| || || Sbjct 56257 GATCCCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCAC 56316 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 56317 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 56364 >seq38 Length=423541 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | || || || ||||||||||| || | Sbjct 319949 ACCTCCACGGAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGA 320008 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| || || || ||||| || ||||| ||||||| ||||| ||||| || Sbjct 320009 AAGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGG 320068 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||||||||| | ||| || | || || ||||| |||| || || Sbjct 320069 GATCCCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCAC 320128 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 320129 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 320176 >seq15 Length=607589 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 230204 CGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGA 230263 ||| || ||||||| |||| |||| ||||| || ||||||| |||||| ||||| Sbjct 330889 CGAGGCCCTTCCTTGTGCTCTTCTCGGTATGAACGCAACTCTCATGAAGCAATACATCGA 330830 Query 230264 ATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAA 230323 ||| || || |||||| | || | || || || ||||||| || || || || | || Sbjct 330829 ATTTGTTGCCGATCGTCTGCTCCTTGCCCTCGGAAACGAGAAGGTCTACAAGTCTACCAA 330770 Query 230324 CCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCG 230383 ||| |||| || |||||| ||| || || || || || ||||||||||| ||||| Sbjct 330769 CCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCG 330710 Query 230384 TGTCAGCGATTATCAAAGGCCCGGTGT 230410 |||| | || || |||| | ||||||| Sbjct 330709 TGTCGGTGACTACCAAAAGGCCGGTGT 330683 >seq75 Length=245354 Score = 104 bits (114), Expect = 5e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 230204 CGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGA 230263 ||| || ||||||| |||| |||| ||||| || ||| ||| |||||| ||||| Sbjct 39329 CGAGGCCCTTCCTTGTGCTCTTCTCGGTATGAACGCAACTCTAATGAAGCAATACATCGA 39388 Query 230264 ATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAA 230323 || || || |||||| | | | || || || | ||||| || || || || | || Sbjct 39389 GTTTGTTGCCGATCGTCTGCTTCTCGCCCTCGGAAATGAGAAGGTCTACAAGTCTACCAA 39448 Query 230324 CCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCG 230383 ||| |||| || |||||| ||| || || || || || ||||||||||| ||||| Sbjct 39449 CCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCG 39508 Query 230384 TGTCAGCGATTATCAAAGGCCCGGTGT 230410 |||| | || || |||| | ||||||| Sbjct 39509 TGTCGGTGACTACCAAAAGGCCGGTGT 39535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046725600895156