Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq96 165 2e-35
seq7 159 7e-34
seq59 147 5e-30
seq10 147 5e-30
seq102 145 2e-29
seq38 145 2e-29
seq15 122 2e-22
seq75 104 5e-17
>seq96
Length=182788
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || | || || || |||||||||||||| |
Sbjct 166436 ACCACCACGGAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 166377
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| ||||| || || || ||||||| ||||||||| ||| ||
Sbjct 166376 CAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGGGG 166317
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||||||||||||| | || || | ||||| ||||| || | ||||||
Sbjct 166316 AATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTGTCAGAGGATTCGAC 166257
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| ||||| ||||| || || | ||||| ||
Sbjct 166256 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 166221
Score = 149 bits (164), Expect = 1e-30
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
||||||||| || || || || | || | || ||| ||||||||||||||||| |
Sbjct 166664 ACCACCACGAAGACGGAGAACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 166605
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| || || |||||||| || || || || ||||| || | ||||||||| || |
Sbjct 166604 CAAG-GTTCGACCATCCTCGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGG 166546
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||| || ||||| ||||| ||||||| ||| ||| | ||||| || ||||| | || |
Sbjct 166545 GAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTCCA 166486
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| | ||||| ||||| || || | |||||| ||||| || |||||
Sbjct 166485 CTTCCAATGTGATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 166437
Score = 138 bits (152), Expect = 2e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || || || || | || || || |||||||||||||| |
Sbjct 166152 ACCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 166093
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| ||||| || || || ||||||| |||||| ||||| ||
Sbjct 166092 GAGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGG 166033
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||||||||||||||| | || || | ||||| ||||| || | ||| ||
Sbjct 166032 AATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGGATTCAAC 165973
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| |||||||| ||||| || ||
Sbjct 165972 CTCAAGAGTGATGGTCTTGCCGGT 165949
Score = 138 bits (152), Expect = 2e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931
|| ||||| || || | |||| || | ||||| || |||||||||||||| || |
Sbjct 166891 CCGCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTC 166832
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| |||||||| | || || || ||||||||||| || || ||||| ||
Sbjct 166831 AAG-GTGCGACCATCCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGG 166773
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||| || |||||||| | || || | || || ||||| || | || ||
Sbjct 166772 GATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAAC 166713
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | ||||| ||||| || ||||||||||| ||||| ||||||||
Sbjct 166712 TTCTAATGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665
>seq7
Length=756160
Score = 159 bits (176), Expect = 7e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || | || || || |||||||||||||| |
Sbjct 415429 ACCACCACGGAGACGGAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 415370
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| ||||| || || || ||||||| ||||||||| ||| ||
Sbjct 415369 CAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGAGG 415310
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||||||||||| | || || | ||||| || || |||| ||||||
Sbjct 415309 GATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTATCAGAAGATTCGAC 415250
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| ||||| ||||| || || | ||||| ||
Sbjct 415249 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 415214
Score = 149 bits (164), Expect = 1e-30
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
||||||||| || || || || | || | || ||| ||||||||||||||||| |
Sbjct 415657 ACCACCACGAAGACGGAGAACTAAGTGCAGGGTAGATTCCTTTTGGATGTTGTAGTCGGA 415598
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| || || |||||||| ||||| || || || || || | ||||||||| || |
Sbjct 415597 CAAG-GTTCGACCATCCTCGAGTTGCTTGCCAGCGAAAATGAGACGTTGTTGATCCGGGG 415539
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||| || ||||| ||||| ||||||| ||| ||| | ||||| || ||||| | ||| |
Sbjct 415538 GAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGATTCCA 415479
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| | || || ||||| || || | |||||| ||||| || |||||
Sbjct 415478 CTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 415430
Score = 147 bits (162), Expect = 5e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931
|| ||||| || || | |||| || | ||||| || |||||||||||||| || |
Sbjct 415884 CCTCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTC 415825
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| |||||||||||||| || || || |||||||| ||||| ||||| ||
Sbjct 415824 AAG-GTGCGACCATCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGG 415766
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||| || |||||||| | || || | || || ||||| || | || ||
Sbjct 415765 GATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAAC 415706
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | ||||| ||||| || ||||| ||||| ||||| ||||||||
Sbjct 415705 TTCTAATGTGATTGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || || || || | || || || ||||||||||||||||
Sbjct 415145 ACCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 415086
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| ||||| || || || ||||||| |||||| ||||| ||
Sbjct 415085 GAGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGG 415026
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||||||||||||||| | || || | ||||| ||||| || | ||| ||
Sbjct 415025 AATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCAAC 414966
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| |||||||| ||||| || ||
Sbjct 414965 CTCAAGAGTGATGGTCTTGCCGGT 414942
>seq59
Length=321881
Score = 147 bits (162), Expect = 5e-30
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | ||| ||||| || ||||| ||||| || ||||| ||||||
Sbjct 265770 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 265829
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| || ||||| ||||| ||||||||||| |||||||| | ||| || | |||
Sbjct 265830 AGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCG 265889
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || | ||||| || || ||||| ||||| ||||| | ||||| |||||
Sbjct 265890 ATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 265948
>seq10
Length=717553
Score = 147 bits (162), Expect = 5e-30
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | ||| ||||| || ||||| ||||| || ||||| ||||||
Sbjct 20114 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 20055
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| || ||||| ||||| ||||||||||| |||||||| | ||| || | |||
Sbjct 20054 AGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCG 19995
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || | ||||| || || ||||| ||||| ||||| | ||||| |||||
Sbjct 19994 ATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 19936
>seq102
Length=175646
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || || || || | || || || ||||||||||| || |
Sbjct 56137 ACCTCCACGGAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGA 56196
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| || || || ||||| || ||||| ||||||| ||||| ||||| ||
Sbjct 56197 AAGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGG 56256
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||||||||||||||| | ||| || | || || ||||| |||| || ||
Sbjct 56257 GATCCCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCAC 56316
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 56317 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 56364
>seq38
Length=423541
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || || || || | || || || ||||||||||| || |
Sbjct 319949 ACCTCCACGGAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGA 320008
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| || || || ||||| || ||||| ||||||| ||||| ||||| ||
Sbjct 320009 AAGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGG 320068
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||||||||||||||| | ||| || | || || ||||| |||| || ||
Sbjct 320069 GATCCCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCAC 320128
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 320129 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 320176
>seq15
Length=607589
Score = 122 bits (134), Expect = 2e-22
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 230204 CGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGA 230263
||| || ||||||| |||| |||| ||||| || ||||||| |||||| |||||
Sbjct 330889 CGAGGCCCTTCCTTGTGCTCTTCTCGGTATGAACGCAACTCTCATGAAGCAATACATCGA 330830
Query 230264 ATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAA 230323
||| || || |||||| | || | || || || ||||||| || || || || | ||
Sbjct 330829 ATTTGTTGCCGATCGTCTGCTCCTTGCCCTCGGAAACGAGAAGGTCTACAAGTCTACCAA 330770
Query 230324 CCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCG 230383
||| |||| || |||||| ||| || || || || || ||||||||||| |||||
Sbjct 330769 CCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCG 330710
Query 230384 TGTCAGCGATTATCAAAGGCCCGGTGT 230410
|||| | || || |||| | |||||||
Sbjct 330709 TGTCGGTGACTACCAAAAGGCCGGTGT 330683
>seq75
Length=245354
Score = 104 bits (114), Expect = 5e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 230204 CGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGA 230263
||| || ||||||| |||| |||| ||||| || ||| ||| |||||| |||||
Sbjct 39329 CGAGGCCCTTCCTTGTGCTCTTCTCGGTATGAACGCAACTCTAATGAAGCAATACATCGA 39388
Query 230264 ATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAA 230323
|| || || |||||| | | | || || || | ||||| || || || || | ||
Sbjct 39389 GTTTGTTGCCGATCGTCTGCTTCTCGCCCTCGGAAATGAGAAGGTCTACAAGTCTACCAA 39448
Query 230324 CCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCG 230383
||| |||| || |||||| ||| || || || || || ||||||||||| |||||
Sbjct 39449 CCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCG 39508
Query 230384 TGTCAGCGATTATCAAAGGCCCGGTGT 230410
|||| | || || |||| | |||||||
Sbjct 39509 TGTCGGTGACTACCAAAAGGCCGGTGT 39535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046725600895156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |