Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq102 131 1e-25 seq96 131 1e-25 seq38 131 1e-25 seq7 122 6e-23 seq59 102 6e-17 seq10 102 6e-17 >seq102 Length=175646 Score = 131 bits (144), Expect = 1e-25 Identities = 158/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| |||||||||||||||| || ||| |||| || Sbjct 56156 ACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCG 56215 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||||| || ||||| || | || | |||||||| || Sbjct 56216 AGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGG 56275 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| || || ||| | |||||||| | || |||||||| | || || |||| Sbjct 56276 ATCTTGGATTTGACATTGT--CAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCT 56333 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 | |||||||||||||| |||||||| ||||||| Sbjct 56334 TGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 56366 >seq96 Length=182788 Score = 131 bits (144), Expect = 1e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGT 44183 ||| |||| ||| || ||||||||||||||||||||||||||| | || || || | | Sbjct 166877 CAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTG-CGACCAT 166819 Query 44184 CGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTT 44243 | |||| |||||| || ||||||||||| |||||||| || | || | |||||||| | Sbjct 166818 CCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTTAT 166759 Query 44244 CCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 || ||||| ||||| | | || ||||| | || || || || | || || | Sbjct 166758 CCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTG 166699 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || | ||||| |||||||| ||||| Sbjct 166698 TCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665 Score = 105 bits (116), Expect = 5e-18 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| ||||||||||| |||| || || | || || Sbjct 166417 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCG 166358 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || ||||||| ||| || ||||| | || | ||| ||||| || Sbjct 166357 AGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGGGGAATACCCTCCTTGTCTTGG 166298 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | |||||||| | |||||| ||||| | || || |||| Sbjct 166297 ATCTTCGACTTGACATTGT--CGATGGTGTCAGAGGATTCGACCTCGAGGGTGATGGTCT 166240 Query 44307 TTCCCGTGAGGGTCTTCAC 44325 | || ||||||||||| || Sbjct 166239 TGCCGGTGAGGGTCTTGAC 166221 Score = 104 bits (114), Expect = 2e-17 Identities = 142/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||||||||||||| |||| | || | || | || || |||||||| || ||||| Sbjct 166627 TCCTTTTGGATGTTGTAGTCGGACAAGGTT-CGACCATCCTCGAGCTGCTTGCCAGCAAA 166569 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 || | ||| || ||||| | || | |||||||| || ||||| || || | || Sbjct 166568 AATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTT-TGATTTGACGT 166510 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | || || || | ||| ||||| |||| || || ||||| || ||||| ||||| | Sbjct 166509 TGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCTTGCCGGTGAGAGTCTTGA 166450 Query 44325 CGAAGATTTGCAT 44337 ||||||||||||| Sbjct 166449 CGAAGATTTGCAT 166437 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| ||||||||||| |||| ||| ||| |||| || Sbjct 166133 ACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 166074 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || ||||||| ||| ||||| || | || | || ||||| || Sbjct 166073 AGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 166014 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||| | |||||| ||||| | || || |||| Sbjct 166013 ATCTTGGACTTGACATTGT--CGATGGTGTCAGAGGATTCAACCTCAAGAGTGATGGTCT 165956 Query 44307 TTCCCGTGA 44315 | || |||| Sbjct 165955 TGCCGGTGA 165947 >seq38 Length=423541 Score = 131 bits (144), Expect = 1e-25 Identities = 158/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| |||||||||||||||| || ||| |||| || Sbjct 319968 ACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCG 320027 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||||| || ||||| || | || | |||||||| || Sbjct 320028 AGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGG 320087 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| || || ||| | |||||||| | || |||||||| | || || |||| Sbjct 320088 ATCTTGGATTTGACATTGT--CAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCT 320145 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 | |||||||||||||| |||||||| ||||||| Sbjct 320146 TGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 320178 >seq7 Length=756160 Score = 122 bits (134), Expect = 6e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG-GCGAGTTGGCGCTCGT 44183 ||| |||| ||| || ||||||||||||||||||||||||||| | || | ||| | | Sbjct 415870 CAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGT-GCGACCAT 415812 Query 44184 CGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTT 44243 | || || ||||| || || |||||||| || ||||| || | || | |||||||| | Sbjct 415811 CCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCTTCCTTAT 415752 Query 44244 CCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 || ||||| ||||| | | || ||||| | || || || || | || || | Sbjct 415751 CCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTG 415692 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || | |||||| |||||||| ||||| Sbjct 415691 TCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658 Score = 104 bits (114), Expect = 2e-17 Identities = 142/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||||||||||||| |||| | || | || | || || || ||||| || || || Sbjct 415620 TCCTTTTGGATGTTGTAGTCGGACAAGGTT-CGACCATCCTCGAGTTGCTTGCCAGCGAA 415562 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 || | ||| || ||||| | || | |||||||| || ||||| || || | || Sbjct 415561 AATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTT-TGATTTGACGT 415503 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | || || || | ||||||||| |||| ||||| ||||| || ||||| ||||| | Sbjct 415502 TGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTTGA 415443 Query 44325 CGAAGATTTGCAT 44337 ||||||||||||| Sbjct 415442 CGAAGATTTGCAT 415430 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| ||||||||||| || | ||| ||| |||| || Sbjct 415126 ACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCGTCCTCA 415067 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || ||||||| ||| ||||| || | ||| | || ||||| || Sbjct 415066 AGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGG 415007 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||||| |||||| ||||| | || || |||| Sbjct 415006 ATCTTGGACTTGACATTGT--CGATGGTGTCGGAGGATTCAACCTCAAGAGTGATGGTCT 414949 Query 44307 TTCCCGTGA 44315 | || |||| Sbjct 414948 TGCCGGTGA 414940 Score = 96.9 bits (106), Expect = 2e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||| ||||||||||| |||| || || | || || Sbjct 415410 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCG 415351 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || ||||||| ||| || ||||| | ||| | ||| ||||| || Sbjct 415350 AGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCTTGG 415291 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| || | ||||| ||||| | || || |||| Sbjct 415290 ATCTTCGACTTGACATTGT--CGATGGTATCAGAAGATTCGACCTCGAGGGTGATGGTCT 415233 Query 44307 TTCCCGTGAGGGTCTTCAC 44325 | || ||||||||||| || Sbjct 415232 TGCCGGTGAGGGTCTTGAC 415214 >seq59 Length=321881 Score = 102 bits (112), Expect = 6e-17 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| || | || ||| |||| || || ||||| ||||| |||| Sbjct 265768 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 265827 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| ||||||||| || | || | || ||||| ||| ||||| || || ||| Sbjct 265828 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 265887 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||||| ||| || ||||| | || || ||||| ||||| |||||||| || Sbjct 265888 --CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGAC 265945 Query 44326 GAAG 44329 |||| Sbjct 265946 GAAG 265949 >seq10 Length=717553 Score = 102 bits (112), Expect = 6e-17 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| || | || ||| |||| || || ||||| ||||| |||| Sbjct 20116 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 20057 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| ||||||||| || | || | || ||||| ||| ||||| || || ||| Sbjct 20056 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 19997 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||||| ||| || ||||| | || || ||||| ||||| |||||||| || Sbjct 19996 --CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGAC 19939 Query 44326 GAAG 44329 |||| Sbjct 19938 GAAG 19935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359985951193638