Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq102 131 1e-25
seq96 131 1e-25
seq38 131 1e-25
seq7 122 6e-23
seq59 102 6e-17
seq10 102 6e-17
>seq102
Length=175646
Score = 131 bits (144), Expect = 1e-25
Identities = 158/213 (74%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || |||||| |||||||||||||||| || ||| |||| ||
Sbjct 56156 ACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCG 56215
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| ||||||| || ||||| || | || | |||||||| ||
Sbjct 56216 AGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGG 56275
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| || || ||| | |||||||| | || |||||||| | || || ||||
Sbjct 56276 ATCTTGGATTTGACATTGT--CAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCT 56333
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339
| |||||||||||||| |||||||| |||||||
Sbjct 56334 TGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 56366
>seq96
Length=182788
Score = 131 bits (144), Expect = 1e-25
Identities = 159/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGT 44183
||| |||| ||| || ||||||||||||||||||||||||||| | || || || | |
Sbjct 166877 CAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTG-CGACCAT 166819
Query 44184 CGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTT 44243
| |||| |||||| || ||||||||||| |||||||| || | || | |||||||| |
Sbjct 166818 CCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTTAT 166759
Query 44244 CCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303
|| ||||| ||||| | | || ||||| | || || || || | || || |
Sbjct 166758 CCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTG 166699
Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || | ||||| |||||||| |||||
Sbjct 166698 TCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665
Score = 105 bits (116), Expect = 5e-18
Identities = 144/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || |||||| ||||||||||| |||| || || | || ||
Sbjct 166417 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCG 166358
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || ||||||| ||| || ||||| | || | ||| ||||| ||
Sbjct 166357 AGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGGGGAATACCCTCCTTGTCTTGG 166298
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | |||||||| | |||||| ||||| | || || ||||
Sbjct 166297 ATCTTCGACTTGACATTGT--CGATGGTGTCAGAGGATTCGACCTCGAGGGTGATGGTCT 166240
Query 44307 TTCCCGTGAGGGTCTTCAC 44325
| || ||||||||||| ||
Sbjct 166239 TGCCGGTGAGGGTCTTGAC 166221
Score = 104 bits (114), Expect = 2e-17
Identities = 142/193 (74%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
||||||||||||||||| |||| | || | || | || || |||||||| || |||||
Sbjct 166627 TCCTTTTGGATGTTGTAGTCGGACAAGGTT-CGACCATCCTCGAGCTGCTTGCCAGCAAA 166569
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|| | ||| || ||||| | || | |||||||| || ||||| || || | ||
Sbjct 166568 AATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTT-TGATTTGACGT 166510
Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
| | || || || | ||| ||||| |||| || || ||||| || ||||| ||||| |
Sbjct 166509 TGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCTTGCCGGTGAGAGTCTTGA 166450
Query 44325 CGAAGATTTGCAT 44337
|||||||||||||
Sbjct 166449 CGAAGATTTGCAT 166437
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/189 (71%), Gaps = 4/189 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| ||||||||||| |||| ||| ||| |||| ||
Sbjct 166133 ACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 166074
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || ||||||| ||| ||||| || | || | || ||||| ||
Sbjct 166073 AGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 166014
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||| | |||||| ||||| | || || ||||
Sbjct 166013 ATCTTGGACTTGACATTGT--CGATGGTGTCAGAGGATTCAACCTCAAGAGTGATGGTCT 165956
Query 44307 TTCCCGTGA 44315
| || ||||
Sbjct 165955 TGCCGGTGA 165947
>seq38
Length=423541
Score = 131 bits (144), Expect = 1e-25
Identities = 158/213 (74%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || |||||| |||||||||||||||| || ||| |||| ||
Sbjct 319968 ACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCG 320027
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| ||||||| || ||||| || | || | |||||||| ||
Sbjct 320028 AGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGG 320087
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| || || ||| | |||||||| | || |||||||| | || || ||||
Sbjct 320088 ATCTTGGATTTGACATTGT--CAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCT 320145
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339
| |||||||||||||| |||||||| |||||||
Sbjct 320146 TGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 320178
>seq7
Length=756160
Score = 122 bits (134), Expect = 6e-23
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG-GCGAGTTGGCGCTCGT 44183
||| |||| ||| || ||||||||||||||||||||||||||| | || | ||| | |
Sbjct 415870 CAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGT-GCGACCAT 415812
Query 44184 CGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTT 44243
| || || ||||| || || |||||||| || ||||| || | || | |||||||| |
Sbjct 415811 CCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCTTCCTTAT 415752
Query 44244 CCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303
|| ||||| ||||| | | || ||||| | || || || || | || || |
Sbjct 415751 CCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTG 415692
Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || | |||||| |||||||| |||||
Sbjct 415691 TCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658
Score = 104 bits (114), Expect = 2e-17
Identities = 142/193 (74%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
||||||||||||||||| |||| | || | || | || || || ||||| || || ||
Sbjct 415620 TCCTTTTGGATGTTGTAGTCGGACAAGGTT-CGACCATCCTCGAGTTGCTTGCCAGCGAA 415562
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|| | ||| || ||||| | || | |||||||| || ||||| || || | ||
Sbjct 415561 AATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTT-TGATTTGACGT 415503
Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
| | || || || | ||||||||| |||| ||||| ||||| || ||||| ||||| |
Sbjct 415502 TGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTTGA 415443
Query 44325 CGAAGATTTGCAT 44337
|||||||||||||
Sbjct 415442 CGAAGATTTGCAT 415430
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/189 (72%), Gaps = 4/189 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| ||||||||||| || | ||| ||| |||| ||
Sbjct 415126 ACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCGTCCTCA 415067
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || ||||||| ||| ||||| || | ||| | || ||||| ||
Sbjct 415066 AGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGG 415007
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||||| |||||| ||||| | || || ||||
Sbjct 415006 ATCTTGGACTTGACATTGT--CGATGGTGTCGGAGGATTCAACCTCAAGAGTGATGGTCT 414949
Query 44307 TTCCCGTGA 44315
| || ||||
Sbjct 414948 TGCCGGTGA 414940
Score = 96.9 bits (106), Expect = 2e-15
Identities = 142/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || || |||||| ||||||||||| |||| || || | || ||
Sbjct 415410 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCG 415351
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || ||||||| ||| || ||||| | ||| | ||| ||||| ||
Sbjct 415350 AGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCTTGG 415291
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | ||||| || | ||||| ||||| | || || ||||
Sbjct 415290 ATCTTCGACTTGACATTGT--CGATGGTATCAGAAGATTCGACCTCGAGGGTGATGGTCT 415233
Query 44307 TTCCCGTGAGGGTCTTCAC 44325
| || ||||||||||| ||
Sbjct 415232 TGCCGGTGAGGGTCTTGAC 415214
>seq59
Length=321881
Score = 102 bits (112), Expect = 6e-17
Identities = 134/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| || | || ||| |||| || || ||||| ||||| ||||
Sbjct 265768 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 265827
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| ||||||||| || | || | || ||||| ||| ||||| || || |||
Sbjct 265828 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 265887
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||||| ||| || ||||| | || || ||||| ||||| |||||||| ||
Sbjct 265888 --CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGAC 265945
Query 44326 GAAG 44329
||||
Sbjct 265946 GAAG 265949
>seq10
Length=717553
Score = 102 bits (112), Expect = 6e-17
Identities = 134/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| || | || ||| |||| || || ||||| ||||| ||||
Sbjct 20116 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 20057
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| ||||||||| || | || | || ||||| ||| ||||| || || |||
Sbjct 20056 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 19997
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||||| ||| || ||||| | || || ||||| ||||| |||||||| ||
Sbjct 19996 --CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGAC 19939
Query 44326 GAAG 44329
||||
Sbjct 19938 GAAG 19935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359985951193638
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