Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq219 104 2e-17 >seq219 Length=188997 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170 ||||| ||||| || | ||||||||||| ||||||||| | | ||||| ||| Sbjct 115587 ACGTAGAACTGTGCAAACATATGACAAGGAGGAAGAGCCATCTTCCTCAAATCCGCCGGG 115646 Query 21171 TTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCACG 21230 ||||| |||| || || ||| | ||||||| || || | || | ||| | || Sbjct 115647 TTCCATGCGCTCAGAATGATTCTTCGATCGTACGGTCGATTCTTCAACTTATCGATAACC 115706 Query 21231 TAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCC 21290 | || ||||||||| || || || ||||| || ||| |||| |||| || || Sbjct 115707 TCTGCCAACTGGTCCACGCCTTGCCCTGTGTAGTCTGCATCGTGCCCCTTGTATTCTGCA 115766 Query 21291 CCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTC 21337 || ||||| | ||| ||||| |||||||| ||||| || || ||||| Sbjct 115767 CCGAAATGCCGCCATTGGAAGCCGTACACAGGCCCAAGGTCTCCCTC 115813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774237830240