Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq50 96.9 2e-15 >seq50 Length=575836 Score = 96.9 bits (106), Expect = 2e-15 Identities = 298/452 (66%), Gaps = 13/452 (3%) Strand=Plus/Minus Query 22736 CAACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGG 22795 |||| |||||| | |||||||| || || || ||| || | || ||| || || ||| Sbjct 303625 CAAC-CGTCTCGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGTGGATCGTTCGCGT 303567 Query 22796 CCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGA 22855 |||| |||||||||||||| ||| || ||||| || | | ||||| || ||| | | Sbjct 303566 CCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTTTCTAATGAGCTCA 303507 Query 22856 TTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAA 22915 || |||||||| || | ||| |||||||||||| || |||| | || | Sbjct 303506 TTTCTCGTGACGAGGGCATGCACACAGACTTTGCTTGTCTGTTGTTCTCTC---TGCTCA 303450 Query 22916 ACAAACCGT----GTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAG 22971 || |||||| | | || | || || ||||| | || ||||| || |||||| Sbjct 303449 AC-AACCGTCCAAGCAAAGATGCTGTGCAGGCCATCATCACCGAGGCCGTCGAGATTGAG 303391 Query 22972 ACGGCTTTCTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGT-AT 23030 || ||| | || || || | ||||| |||||||| | || | || Sbjct 303390 CAGGAGTTCCTGTCCGATGCTCTCCCCTGCGCACTACTCGGTATGAA-CGCTACTCTCAT 303332 Query 23031 GAGACTGTACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGAT 23090 | | | |||||| |||| || || || || |||||| || || || | | ||| Sbjct 303331 GTGCCAGTACATCGAGTTCGTCGCCGACCGTCTGCTCCTGGCTCTTGGCAACCCCAAGTA 303272 Query 23091 GTATAACGTTGCCAATCCATTTGATTTCATGGATAACAT-TAGCATTGAAGGTAAAACAA 23149 || |||| |||| || || || |||||||| ||||| | || ||| || || || | Sbjct 303271 CTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGC-TTGCCGGCAAGACCA 303213 Query 23150 ACTTCTTTGAACGCCGTGTGAGTGAATATCAG 23181 ||||||| || ||||| |||| || ||| Sbjct 303212 ACTTCTTCGAGAAGCGTGTTGGTGATTACCAG 303181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232132540214