Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq53 91.5 1e-13 >seq53 Length=112647 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| ||||| ||| |||||||| || |||||||| |||| | ||| | ||||| Sbjct 69686 CACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAGTCCGAGAGTGTGCGACCATCCTC 69745 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 |||||| ||||| ||| | || || | |||||| || || | |||||| ||||| Sbjct 69746 CAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTG 69805 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 ||| || || || | | | | ||||| | ||| || | ||||||||| || Sbjct 69806 AATCTTGGACTTGACATTGTCAATGGTATCCGACGACTCAACCTCAAGGGTAATGGTCTT 69865 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||||| | || ||||| || |||||||| Sbjct 69866 GCCTGTCAGGGTCTTGACGAAGATTTGCAT 69895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414571092219172