Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq288 113 7e-21 seq61 104 4e-18 >seq288 Length=48662 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct 13832 GCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 13774 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| || ||||||||||| ||||||||| |||||| Sbjct 13773 CCGTCGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 13733 >seq61 Length=217166 Score = 104 bits (114), Expect = 4e-18 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct 127748 GCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 127806 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| || ||||||||||| ||||||||| |||| Sbjct 127807 CCGCCGTCTTGCGCGTCGTGGTGGTGTCAAGCGTATCTC 127845 Score = 87.8 bits (96), Expect = 3e-13 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 16539 TCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTT 16598 |||| || |||| |||| ||| |||||| |||||| || || |||| ||| || Sbjct 127905 TCTACGAGGAGACCCGTGGTGTGCTGAAGACCTTCCTGGAGGGTGTCATCCGTGACGCCG 127964 Query 16599 TCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCAT 16658 || || || |||||||| || || |||||||||||||| | ||| | ||||| || Sbjct 127965 TCACATACACTGAGCACGCCAAGCGCAAGACTGTCACCTCGCTCGATGTTGTCTACGCCC 128024 Query 16659 TGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | || ||||||||||| | | || ||||| || ||||| Sbjct 128025 TCAAGCGTCAAGGCCGCACCCTGTACGGTTTCGGTGGTTAA 128065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074890964234