Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq50 82.4 8e-11 >seq50 Length=575836 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526 |||| || ||| ||||| || |||| || || || | | || | ||||||||| Sbjct 303461 AACAACAGACAAGCAAAGTCTGTGTGCATGCCCTCGTCACGAGAAATGAGCTCATTAGAA 303520 Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCT 21586 || || | ||||||||| | || | ||| || | ||| || || ||||| || | ||| Sbjct 303521 AAGGTAAGACCGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGACGCGAACGATCCA 303580 Query 21587 GAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCT 21646 ||||| |||||||| ||||| ||||| ||||| | || | || | ||||| | Sbjct 303581 CTGAAGAAGATGCCCTCGACGGCGGCAAAGGCAACGAGACGGTTGGCGAAGGTAGAGTTC 303640 Query 21647 TTATCCAATATCCAT 21661 || ||| | |||||| Sbjct 303641 TTGTCCGAGATCCAT 303655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531898552719120