Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq50 86.0 6e-12 >seq50 Length=575836 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || ||||| || || || || || |||||||| |||| || ||||| | Sbjct 303181 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATGTTCTC 303240 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | | |||| || ||| | | | | ||| Sbjct 303241 CATGAAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTGGGGTTGCCAAGAGCCAGGAGCAG 303300 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GA-TTGCGAATTCATGCCCAACATA 119819 || || || || ||||||||||| | ||||||| || | ||| ||||| || | | Sbjct 303301 ACGGTCGGCGACGAACTCGATGTACTGGCACATGAGAGTAGCG--TTCATACCGAGTAGT 303358 Query 119820 GCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 ||| || | ||||| || | ||| |||| ||||| ||||| || || Sbjct 303359 GCGCAGGGGAGAGCATCGGACAGGAACTCCTGCTCAATCTCGACGGCCTC 303408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660377651360