Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq306 113 3e-20 seq180 102 5e-17 >seq306 Length=92703 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG-----GGGGTAATCTCGT 25956 ||||||||||||| ||| |||||||||||||||||||||||| | | | ||||||| Sbjct 58518 AAGCCCGTTCCCTGGGCCGTGGTTTCGCTAGATAGTAGATAGTGACAGTGATGATCTCGT 58459 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||||| |||||||||||| ||||| Sbjct 58458 TAATCCATTCATGCGCATCACTAATTAGACGACGA 58424 >seq180 Length=147405 Score = 102 bits (112), Expect = 5e-17 Identities = 199/294 (68%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254 ||| | |||||||||||||| ||| |||||| ||||| | || || ||||| ||| Sbjct 104340 GACCCCTTCTACCGCTACAAGATGGAGCGCATACAGTCCAAGATTGAAGGCAAGGGCAAC 104399 Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314 || || || ||||||||||||||| || | || || || | || | |||||| | Sbjct 104400 GGCATCAAGACCGTCATTGTCAACCTGACCAGCGTTGCCAACTCTCTTGCCCGCCCTCCT 104459 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 | || | ||||| || || | ||| |||||||||||||| | | | ||| Sbjct 104460 TCTCACGTCATCAAATACTTTGGTTTCGAGCTTGGCGCTCAGACCAATACCAACCCCAAT 104519 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 | || |||| ||| | || || | || || || |||||| || |||| || || Sbjct 104520 GATGACCGCTGGATCATCAATGGCGCTCACGACGCTAGCAAGCTCCAAGACTACCTCGAT 104579 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAG 6488 ||||| || |||||| || || || | | ||| | ||||| || |||||| Sbjct 104580 GGCTTCATCACCAAGTTCGTTCTCTGCAAGAAGTGCAAGAACCCTGAAACCGAG 104633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945820226878