Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq53 111 1e-19 seq136 87.8 2e-12 >seq53 Length=112647 Score = 111 bits (122), Expect = 1e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || ||||||| ||||| || | |||||||| | ||| | |||| Sbjct 70327 ACCGGCAAGACCATCACTCTCGAAGTCGAGTCATCCGATACCATCGACAACGTCAAGAGC 70268 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||||||||| || || ||||| || || | || || || ||||| Sbjct 70267 AAGATCCAAGACAAGGAGGGTATCCCTCCTGATCAGCAGCGCTTGATCTTCGCTGGCAAG 70208 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACA 22421 ||| | || ||| ||||||| | ||||| |||||||| || || || ||||| |||| Sbjct 70207 CAGCTCGAAGATGGCCGCACCTTGTCCGACTACAACATCCAGAAGGAGTCCACACTACA 70149 Score = 102 bits (112), Expect = 7e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || ||| |||| || || ||||| | |||| ||| | ||| | |||| Sbjct 70611 ACCGGCAAGACGATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAACGTCAAGAGC 70552 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| |||||||| || ||||| ||||| || || || || || ||||||||||| Sbjct 70551 AAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTTGCCGGCAAG 70492 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | |||||| || ||| | || || ||||| || || || || |||||| Sbjct 70491 CAGCTTGAGGATGGTCGTACCCTTTCGGACTACAATATCCAGAAGGAGTCCACC 70438 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || | || ||||| || || | | Sbjct 69895 ATGCAAATCTTCGTCAAGACCCTGACAGGCAAGACCATTACCCTTGAGGTTGAGTCGTCG 69836 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || |||| || ||||| ||||||||||| || ||||| || || Sbjct 69835 GATACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCACCTGACCAG 69776 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || ||| | |||||| ||||| |||| || ||||| Sbjct 69775 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACACTCTCGGACTACAAT 69716 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 69715 ATCCAGAAGGAGTCGAC 69699 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || | || ||||| || || | | Sbjct 70123 ATGCAAATCTTCGTCAAGACCCTGACAGGCAAGACCATTACCCTTGAGGTTGAGTCGTCG 70064 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || |||| || ||||| ||||||||||| || ||||| || || Sbjct 70063 GATACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCACCTGACCAG 70004 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | || || ||| || | || || |||||| Sbjct 70003 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGACGGCCGTACGCTATCAGACTACAAC 69944 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 69943 ATCCAGAAGGAATCTAC 69927 >seq136 Length=202766 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||| ||||| || || || || ||||| || || |||||||| ||| | || Sbjct 66898 AGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGA 66957 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 |||| |||||| | ||||| |||||||| || || || || || | || | || | Sbjct 66958 GGATGGCCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGACGCTCCACCTGGTGCT 67017 Query 22431 GCGATTGCGCGGAGGT 22446 ||| |||| || ||| Sbjct 67018 GCGCCTGCGTGGTGGT 67033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726270982970