Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq5 468 2e-127 >seq5 Length=465174 Score = 468 bits (518), Expect = 2e-127 Identities = 503/663 (76%), Gaps = 2/663 (0%) Strand=Plus/Minus Query 42536 GAGGCGAGGATCGACGCGCCGCCGATCCCGTCACCCCCCGTGCGCGCCGCGAAGAGGACG 42595 || ||||||| ||| |||||||||| ||||| || ||||| || |||| |||| | Sbjct 152075 GACGCGAGGACCGAGACGCCGCCGATTCCGTCGAGACCGGTGCGTGCGCCGAACAGGATG 152016 Query 42596 ACCTTGTTGCCTAGGCCCGTCGCGTTGGCGAGCTTGAGGTCCTCGTGCCGGAGCACGCCC 42655 | ||||||||| ||||| ||| ||| || | || |||||| || | ||||| Sbjct 152015 ATCTTGTTGCCCGCGCCCGAAGCGAAGGCCAGATGCAGATCCTCGACGCGCATGACGCCG 151956 Query 42656 ACCGCCAGGGCGTTGACCAGCGGATTGGCCTG-ATAGACGGCATCGAACACGGTCTCGCC 42714 | || ||||||||||||||||| || |||| |||| | ||||| || |||||||| Sbjct 151955 GCAGCGAGGGCGTTGACCAGCGGGTTA-CCTGCATAGGACTCGTCGAAGACCGTCTCGCC 151897 Query 42715 GCCGATGTTCGGCAGACCGAGGCAGTTGCCGTAGAAGCTGATGCCGCTGGTGACGCCGTG 42774 ||||||||||||||| |||||| |||| ||||| | || |||| ||| |||| Sbjct 151896 GCCGATGTTCGGCAGGCCGAGGGAGTTTCCGTATCCACCGACACCGCGCACGACACCGTC 151837 Query 42775 CACGACCCGCGCCGTGTCGGGGTCGTCGGCCGCGCCGAAGCGCAGGGCGTCCATGACCGC 42834 ||||| || || |||||| |||| || || ||||| || || |||||||| || Sbjct 151836 GACGACGCGACGGGTATCGGGGGCGTCAGCAGCACCGAACCGAAGCTGATCCATGACGGC 151777 Query 42835 GACCGGGCGAGCGCCCATGGAGATGATGTCGCGGACGATGCCGCCCACACCCGTCGCCGC 42894 || ||| ||||| ||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct 151776 GATCGGACGAGCACCCATGGCCATGATGTCGCGGACGATGCCGCCGACACCGGTCGCCGC 151717 Query 42895 GCCCTGGAAGGGCTCGATGAACGAGGGGTGGTTGTGACTCTCCGCCTTGAACGTGACCGC 42954 |||||| | ||||||| | |||| ||||||||||| ||||| ||||||||||||| || Sbjct 151716 ACCCTGGTAAGGCTCGACGTACGACGGGTGGTTGTGGCTCTCGACCTTGAACGTGACTGC 151657 Query 42955 CCATCCCTCGCCGACGTCGATGACGCCCGCGTTCTGCCCCATCCCGACCATGAGGCGCTC 43014 ||| || || |||| ||||| |||||| ||||||| || || ||| ||| | | | Sbjct 151656 CCAGCCGTCACCGATGTCGACGACGCCGGCGTTCTCACCGATACCGGCCAGCATGTTGGC 151597 Query 43015 GCGCATCTCGTCCGAGACCTTCTGCCCGAACCTCTTGAGGTAGAGCTTGCTCGACTTGTA 43074 |||||||||||| | | ||| ||||| ||||| || |||| |||||||| Sbjct 151596 GCGCATCTCGTCGGTGGTGGTCTTGCCGAAGTATCCGAGGTGGACCTTGGAGGACTTGTA 151537 Query 43075 GGAGCAGTGCTCCGACCACATCACCGAGTACATCGCCAGCTCGCCCGAGGTGGGGCGGCG 43134 ||||||||||| |||||||||||||||||||||||| ||| | ||||| ||||| Sbjct 151536 CGAGCAGTGCTCGCTCCACATCACCGAGTACATCGCCAGTTCGGCGTCCGTGGGACGGCG 151477 Query 43135 GCCGAGGATCTCCTTGATCCTCGCGTACTCGTCGTCCTTGAGGCCCAGCGCCGCGTAGGG 43194 ||| |||||||||||||| | ||||| |||||||||||||| || ||| || | | || Sbjct 151476 GCCCAGGATCTCCTTGATGCGTGCGTATTCGTCGTCCTTGAGACCGAGCTCCTTGAACGG 151417 Query 43195 CTG 43197 ||| Sbjct 151416 CTG 151414 Score = 360 bits (398), Expect = 6e-95 Identities = 693/1006 (69%), Gaps = 36/1006 (4%) Strand=Plus/Minus Query 41495 CCCGAGGGTATGCGGCGCGAGACGTCGTCGATGAGGCCGAGCACGCCCACGAGAGGAGTG 41554 |||| || |||||||| ||||||||||| | ||||| ||| | || | || || Sbjct 153131 CCCGTCGGGATGCGGCGGTGAACGTCGTCGATCACACCGAGGACGGCAACCACCGGCGTC 153072 Query 41555 GGGTGGATCGGCACGTCGCCGGTCTGGTTGTAGAACGAGACGTTCCCGCCCGTGACCGGG 41614 || |||| | | | ||||||||||||||||| |||||| ||||| ||||| ||| Sbjct 153071 GGCAGGATTGCCGTGGATCCGGTCTGGTTGTAGAAGCTGACGTTGCCGCCGGTGACGGGG 153012 Query 41615 GTGCCCAGGGCGTAGCAGCCGTCGGCGAGCCCGTCCACCGTCTGACCGAACTGCCACATG 41674 |||| |||| | |||||||||||| || ||| || | ||| ||||||||||||| Sbjct 153011 ATGCCGAGGGTGGCGCAGCCGTCGGCAAGGCCGCGAACGGCCTGCTGGAACTGCCACATG 152952 Query 41675 ACCTCGGGATTCTCCGGGGAGCCGAAGTTCAGGCAGTCGGTGACCGCAGTGGGCACGGCG 41734 || | || | ||| || || |||||||||||||||| || ||| || ||||| ||| Sbjct 152951 ACACCCGGGTCCTCGGGAGAACCGAAGTTCAGGCAGTTGGAGACGGCCTTGGGCGTTGCG 152892 Query 41735 CCGGTGACCGCGACGTTGCGGTAGGCCTCGGCGAGGGCGAGCTGTGCGCCCGCGTACGGG 41794 || ||||| || ||||||||| | |||||||| | |||||||| || || | ||||||| Sbjct 152891 CCCGTGACTGCCACGTTGCGGAAAGCCTCGGCCAACGCGAGCTGCGCACCGGTGTACGGG 152832 Query 41795 TCGAGCTGGCAGTAGCGGCCGTTCGCGTCGGTCGCGATCGCGAACCCGAGGCCCGACTCC 41854 |||||| | ||||||||| |||||||| | | |||| ||| | || | || | Sbjct 152831 TCGAGCGCGGTGTAGCGGCCCGAAGCGTCGGTGGACAGTGCGATTCCGCGTCCGGTCTTC 152772 Query 41855 TCATCGACGCGGATCATGCCGGCGTCGTCGGGGAAGCTGAGGGCCGTGTTGCCGAGCACG 41914 || |||| |||||| | ||| ||||| || | ||| | ||||| ||| | ||| Sbjct 152771 TCGTCGATGCGGATGACACCGCCGTCGGCGTTCTCGGCCAGGACGGTGTTTCCGCGGACG 152712 Query 41915 TAGTAGTCGTACTGGTTCGTGATCCACGACGTGTCGGCGAGGTTGGGGGAGCTCACGAGC 41974 ||| ||||||||| | ||||||||| | |||| | ||| || |||| Sbjct 152711 TAGCGGTCGTACTGCTCGGTGATCCAC----TTGCGGC-TGCACAGGGCAG---GCGAG- 152661 Query 41975 GCGAGGAACTGCTCACGCAGGACCG---CGGGGTCG--TTCG--AGCGGGA--GAGGAGC 42025 |||| | || ||| ||||| || || | ||| ||| ||||| || Sbjct 152660 GCGATCATCT--TCA-GCAGGGTCGCTTCGAGCTCGGCGTCGGTTTCGGGACGCTTCAGT 152604 Query 42026 TCGGCACTGTCG-----GCCTGCAGGGCGTCGAGCCAGGTCGGGTAG-GCGACGGGGCGC 42079 ||||| |||| || || ||| || || | |||| | |||||||||| Sbjct 152603 CCGGCA--GTCGTATTCGCGATCAAGGCATCCTGCGTTG-CGGGACGCTCGACGGGGCGG 152547 Query 42080 TCGTAGACCGGGCCGTCGACGGCGACCGTGGACGGGTCCACGTCGACGATCCGCTCTCCC 42139 | ||| |||||||| ||| ||||| ||| |||| |||||||||| ||| || Sbjct 152546 TGGTAAACCGGGCCCTCGTGCGCGACGGTGCGCGGGGGAACGTCGACGACGGTCTCGCCG 152487 Query 42140 TGCCAGTCGATGACGAGACGGCCGTCGCCGGTGACCTCGCCGAGCACGGAGGTCTCCACC 42199 |||||| |||| ||| | | || ||||||||||||||| ||| || | || Sbjct 152486 TGCCAGGAGATGGTGAGGTGCTCACCGTCGGTGACCTCGCCGATGTCGGTGGCCAGGACG 152427 Query 42200 TCCCACTTGCCGGTGACGGCGAGGAACGCGTCGAGCTTCGCAGGCGAGACGATGGCCATC 42259 |||||||| | ||| | | |||||| |||| ||| | |||| ||| | ||| | Sbjct 152426 TCCCACTTCTTGCAGACCTCCATGAACGCATCGACGTTCTCGGGCGTGACCACGGCGCAC 152367 Query 42260 ATCCGCTCCTGCGACTCCGACATGAGGATCTCCTCGGCC---GTGAGCGAGGGGTCGCGG 42316 || ||||||||||| || | || || | |||||||| || | || | |||| Sbjct 152366 ATGCGCTCCTGCGATTC--GCTCGA-GAGCACCTCGGCCGGGGTCATGCCGGTGGCGCGC 152310 Query 42317 AGGAGCACGTTGTCGAGCGAGACGTGCATTCCGCTGTTGCCGTTGGCGGCGAGCTCGCTC 42376 | | || || ||||| || |||||| |||| || |||| ||||| |||||| Sbjct 152309 ATCGGAACCTTCTCGAGGTTGATGTGCATGCCGCCGTCGCCGGCCGCGGCCAGCTCGGAG 152250 Query 42377 GTGGCGCAGGAGATGCCTGCAGCCCCGAGGTCCTGGATCGCCTCGACCAGCTCGTCGCGG 42436 ||||||||||| | || || | |||||||||||||| | |||| || || | | Sbjct 152249 GTGGCGCAGGACAGCCCGGCGCCGCCGAGGTCCTGGATGCCGACGACGAGGCCGGCCTTG 152190 Query 42437 TACAGCTCCAGGCAGCACTCGATGAGCACCTTCTCGGCGAAGGGGT 42482 || || || || ||||||||||||||||||||||||| ||| |||| Sbjct 152189 TAAAGGTCGAGACAGCACTCGATGAGCACCTTCTCGGTGAACGGGT 152144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148245804976012