Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq249 149 7e-31 seq50 129 7e-25 >seq249 Length=183263 Score = 149 bits (164), Expect = 7e-31 Identities = 526/814 (65%), Gaps = 27/814 (3%) Strand=Plus/Plus Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 ||||| || || || || || |||| || || || |||||| || | |||||| || Sbjct 118109 GTGTATTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGG 118168 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || ||| |||| |||||||||||||||||| | || | || ||||| || || Sbjct 118169 TTGCTCTTCCTGTTGGCGGCATCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTCTGA 118228 Query 114632 GACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC- 114690 | || ||| || || | ||||| | ||| | || || || || |||| Sbjct 118229 GCCTCGAGGATGGCATACCAGAGCTTTTGGGCACGGACGGTCTCG------CGACCCTTA 118282 Query 114691 ----CTC-CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745 ||| ||| ||||| ||| ||||| | ||||| || || | | || | || Sbjct 118283 TTCTCTCTCTCATACTTCTCGTACAGGGCAACGAACTCGTCGCCGTAGACGTCAGCAAGA 118342 Query 114746 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 ||||| || | ||||| | || | ||| | ||| ||||| ||||||| |||| Sbjct 118343 CCTGGGCACTCGTTGGGGCACATAAGCGTCCACTCGCCATTCTCCTGGACACGCTGCATG 118402 Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865 || || || |||||||| || || |||| | || ||| ||| | || || | || Sbjct 118403 AAAAGATCGGGGATCCACAGGGCATAGAACAAGTCGCGAGCACGAACCTCCTCCTTGCCG 118462 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 || || | ||| || | ||| | | || || |||||||| || || ||||| | Sbjct 118463 TGGTTCTTCCTCAAGTCGAGGAAGCCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATG 118522 Query 114926 GCGATTGACCCCTTACGACGA------CCAGCCTGGTTTACATACCTCGCTGTGGCATTA 114979 |||| | || | | || ||| |||||| || || | || ||| || Sbjct 118523 GCGAACGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTG 118579 Query 114980 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCC-CCGA-ATACGAG 115037 | || |||||||| || |||| ||| | ||| ||||| || || |||| ||| ||| Sbjct 118580 TAGACACGAAGCATAGGGATGAGACCGTTCGATGTTCCATTGGTTCCTCCGATATAGGAG 118639 Query 115038 ACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 115097 | | |||| | | || | | | ||||||||| || || ||| ||||| Sbjct 118640 CC--AGTGGCACGAATGCGGTGCACATTGAGACCAATACCGCCAGCAGTCTTGGAGATCA 118697 Query 115098 GCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAA 115157 ||| || | | | || ||||||| ||||| || ||| |||| | |||| | Sbjct 118698 ACGCACAAGTCTTCAATGTGTCGTAGATACCGTCAATGCTGTCTTCCTTCATGTCGATGA 118757 Query 115158 GGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGT 115217 ||||||| ||||||||||| |||||| || ||||||||||| || || | ||||| Sbjct 118758 GGAAGCAAGATGACATTTGTGGGGATGGTGTGCCCGCGTTGAAGAGCGTCGGCGACGCGT 118817 Query 115218 GGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCC 115276 | |||| ||| ||| ||||| | ||||| ||||| | | | |||||| ||| Sbjct 118818 GTGTGAA-GTACTTTTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCAATGTCCTCC 118876 Query 115277 CCGTGAATACCGATCGAGACCCGCATAAACATGT 115310 ||| ||||| | | ||| ||||| | ||||| Sbjct 118877 ATGTGGATACCAACAGCGACGCGCATGAGCATGT 118910 Score = 132 bits (146), Expect = 6e-26 Identities = 321/483 (66%), Gaps = 10/483 (2%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||||||||| || ||| | | |||||| |||||||| || |||||||| | Sbjct 117162 TGAACTGAATGGGGGCCGAAGCAGCCATGGTTCGGAGATAGTACATGCCGGTCTTGAGAC 117221 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 | ||||||| | | ||||| |||| | |||| | || || | |||| Sbjct 117222 CAAGCTTCCATCCGGCGAAGTGCATGGAGGTGATCTTGCCCATGGTAGGCTCCTTCATGT 117281 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || ||||| || || || || |||||| ||||| || || ||||| | ||| | Sbjct 117282 GGATGTTCAGTGACTGAGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAATGA 117341 Query 113745 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 113804 | | ||||||||| ||||| |||| | | |||| || ||||| ||||| | Sbjct 117342 TGGTACGCTGCGAGATTTCCCAGACAGTCTTGTATAAGGTCTTGATCTCATCAGGGATGT 117401 Query 113805 CCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACC 113864 ||| ||||| || ||||| | || ||| | | |||||| | || | || Sbjct 117402 TGGGGATGCGCTGGATAGAACCACCGTCGGCGATGATGCGGTTCTTCATGTTCTCGGTCC 117461 Query 113865 AGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAACTCA 113920 | ||||| || | ||||||| | || || | |||||||| |||||| Sbjct 117462 AAAGACCCATGTCGACAAGATCCTTGAGCAACCAGGGG----TTGACAACCTGGAACTCA 117517 Query 113921 CCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979 || ||||| || | ||| ||||| || | ||||||||||| |||||||| ||||| Sbjct 117518 CCAGCGAGCACACGACG-AGAGTAGATGTTTGATGTGTATGGCTCGAAGCACTCGTTGTT 117576 Query 113980 ACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 114039 || | ||| |||| |||||||| |||||||| ||||| | ||| || ||| |||| Sbjct 117577 GCCGAGGATCTGGGAAGTGGAGGCAGTGGGCATAGGTGCAACGAGCAGAGAGTTGCGGAC 117636 Query 114040 ACC 114042 ||| Sbjct 117637 ACC 117639 >seq50 Length=575836 Score = 129 bits (142), Expect = 7e-25 Identities = 306/455 (67%), Gaps = 12/455 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816 ||| || ||||| ||||||||||||||||| ||||| ||| | |||| ||| ||||||| Sbjct 303184 GTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGC-AAGCGAGATGTTCTCCA 303242 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAG 125874 | || || || ||||| | | ||| | | ||| || |||| ||| || Sbjct 303243 TGAAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTG--GGGTTGCCAAGAGCCAGGAGCAG 303300 Query 125875 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 125934 ||| || | |||| |||| ||||||| |||| || ||||||||||| || Sbjct 303301 ACGGTCGGCGACGAACTCGATGTACTGGCACATGAGAGTAGCGTTCATACCGAGTAGTGC 303360 Query 125935 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGC 125994 || ||||| || || | | |||| ||| |||||| || ||||| || | |||||| Sbjct 303361 GCAGGGGAGAGCATCGGACAGGAACTCCTGCTCAATCTCGACGGCCTCGGTGATGATGGC 303420 Query 125995 GTGAATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 126051 || | | || | || | | ||| ||| || || || || | |||| Sbjct 303421 CTGCACAGCATCTTTGCTTGGACGGTTGTTGAGCAGAGAGAACAACAGA--CAAG-CAAA 303477 Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 ||| ||| | ||||||||||| || ||||| ||||| || ||| || || ||||| Sbjct 303478 GTCTGTGTGCATGCCCTCGTCACGAGAAATGAGCTCATTAGAAAAGGTAAGACCGGGCAT 303537 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 ||||| |||||||||| |||||| || | || || || ||||||||| ||||| Sbjct 303538 CAGACCACGCTTCTTCAGCCAGAAGATGGACGCGAACGATCCACTGAAGAAGATGCCCTC 303597 Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 || || || |||| |||||| | || |||| Sbjct 303598 GACGGCGGCAAAGGCAACGAGACGGTTGGCGAAGG 303632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351076181040