Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq53 114 1e-20 >seq53 Length=112647 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| |||| || |||||| || |||||||| || | || || || | Sbjct 69680 ACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAGTCCGAGAGTGTGCGACC 69739 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||||||||| || ||||| ||||||||||| | ||| | || |||||| Sbjct 69740 ATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTT 69799 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| | || | |||| | | | || || ||| || || || | || | Sbjct 69800 GTCC-TGAATCTTGGACTTGACATTGTCAATGGTATCCGACGACTCAACCTCAAGGGTAA 69858 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| ||||| || || ||||| || ||||||||||| Sbjct 69859 TGGTCTTGCCTGTCAGGGTCTTGACGAAGATTTGCAT 69895 Score = 109 bits (120), Expect = 6e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || | || || || |||| || ||||||||||||||||| Sbjct 69933 TCCTTCTGGATGTTGTAGTCTGATAGCGTACGGCCGTCTTCCAGCTGCTTACCAGCGAAG 69992 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 ||||| ||||||||||| | ||| | || |||||||||| ||| | || | |||| | Sbjct 69993 ATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCC-TGAATCTTGGACTTGACATT 70051 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | || || ||| || || || | || ||||| ||||| || || ||||| || Sbjct 70052 GTCAATGGTATCCGACGACTCAACCTCAAGGGTAATGGTCTTGCCTGTCAGGGTCTTGAC 70111 Query 42197 AAAGATTTGCAT 42208 ||||||||||| Sbjct 70112 GAAGATTTGCAT 70123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543210504925920