Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq249 145 9e-30 seq50 129 7e-25 >seq249 Length=183263 Score = 145 bits (160), Expect = 9e-30 Identities = 324/483 (67%), Gaps = 10/483 (2%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||||||||| || ||| | | |||||| |||||||| || |||||||| | Sbjct 117162 TGAACTGAATGGGGGCCGAAGCAGCCATGGTTCGGAGATAGTACATGCCGGTCTTGAGAC 117221 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645 | ||||||| | | ||||| |||| | |||| | || || | |||| Sbjct 117222 CAAGCTTCCATCCGGCGAAGTGCATGGAGGTGATCTTGCCCATGGTAGGCTCCTTCATGT 117281 Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705 || ||||| || || || || |||||| || || || || ||||| | ||| | Sbjct 117282 GGATGTTCAGTGACTGAGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAATGA 117341 Query 115706 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 115765 | | ||||||||| ||||| |||| | | |||| || ||||| ||||| | Sbjct 117342 TGGTACGCTGCGAGATTTCCCAGACAGTCTTGTATAAGGTCTTGATCTCATCAGGGATGT 117401 Query 115766 CCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACC 115825 ||| |||||||| ||||| | || ||| | | |||||| | || | || Sbjct 117402 TGGGGATGCGCTGGATAGAACCACCGTCGGCGATGATGCGGTTCTTCATGTTCTCGGTCC 117461 Query 115826 AGAGACCAATCTTCTTGAGATCCT----CCACGAGGTGCTTATTGACAACAACAAACTCA 115881 | ||||| || | ||||||| | || ||| | |||||||| |||||| Sbjct 117462 AAAGACCCATGTCGACAAGATCCTTGAGCAACCAGGGG----TTGACAACCTGGAACTCA 117517 Query 115882 CCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTT 115940 || ||||| || | ||| |||||||| | ||||||||||| |||||||| ||||| Sbjct 117518 CCAGCGAGCACACGACG-AGAGTAGATGTTTGATGTGTATGGCTCGAAGCACTCGTTGTT 117576 Query 115941 ACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAG 116000 || | ||| |||| |||||||| |||||||| ||||| | ||| || |||||||| Sbjct 117577 GCCGAGGATCTGGGAAGTGGAGGCAGTGGGCATAGGTGCAACGAGCAGAGAGTTGCGGAC 117636 Query 116001 ACC 116003 ||| Sbjct 117637 ACC 117639 Score = 120 bits (132), Expect = 4e-22 Identities = 518/811 (64%), Gaps = 21/811 (3%) Strand=Plus/Plus Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532 ||||| || || || || || |||| || || || |||||| || | |||||| || Sbjct 118109 GTGTATTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGG 118168 Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592 || ||| |||| ||||||||||| ||||| | || | || ||||| || || Sbjct 118169 TTGCTCTTCCTGTTGGCGGCATCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTCTGA 118228 Query 116593 GACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC- 116651 | || ||| || || | ||| | | ||| | || || || || |||| Sbjct 118229 GCCTCGAGGATGGCATACCAGAGCTTTTGGGCACGGACGGTCTCG------CGACCCTTA 118282 Query 116652 ----CTC-CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGC 116706 ||| ||| ||||| ||| ||||| | ||||| || || | || | || Sbjct 118283 TTCTCTCTCTCATACTTCTCGTACAGGGCAACGAACTCGTCGCCGTAGACGTCAGCAAGA 118342 Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 ||||| || | || || | || | ||| | ||| ||||| || |||| |||| Sbjct 118343 CCTGGGCACTCGTTGGGGCACATAAGCGTCCACTCGCCATTCTCCTGGACACGCTGCATG 118402 Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826 || || || |||||||| || || |||| | || ||| ||| | || || | || Sbjct 118403 AAAAGATCGGGGATCCACAGGGCATAGAACAAGTCGCGAGCACGAACCTCCTCCTTGCCG 118462 Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 116886 || || | ||| || | ||| | | || || |||||||| || || ||||| | Sbjct 118463 TGGTTCTTCCTCAAGTCGAGGAAGCCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATG 118522 Query 116887 GCGATTGACCCCTTGCGACGA---CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 |||| | || ||| ||| |||||| || || | || || ||| | Sbjct 118523 GCGAACGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGTAG 118582 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCC-CCGA-ATACGAGACT 117001 || |||||||| || |||| ||| | ||| ||||| || || |||| ||| ||| | Sbjct 118583 ACACGAAGCATAGGGATGAGACCGTTCGATGTTCCATTGGTTCCTCCGATATAGGAGCCA 118642 Query 117002 TGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTG 117061 |||| | | ||| | | | ||||||||| || || ||| ||||| | Sbjct 118643 G--TGGCACGAATGCGGTGCACATTGAGACCAATACCGCCAGCAGTCTTGGAGATCAACG 118700 Query 117062 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 117121 | || | | | || ||||||| || || || ||| |||| | ||||||||| Sbjct 118701 CACAAGTCTTCAATGTGTCGTAGATACCGTCAATGCTGTCTTCCTTCATGTCGATGAGGA 118760 Query 117122 AGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGA 117181 |||| ||||||||||| |||||| || ||||||||||| || || | |||||| Sbjct 118761 AGCAAGATGACATTTGTGGGGATGGTGTGCCCGCGTTGAAGAGCGTCGGCGACGCGTGTG 118820 Query 117182 TGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCG 117240 |||| ||| ||| ||||| | ||||| ||||| | | | |||||| ||| | Sbjct 118821 TGAA-GTACTTTTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCAATGTCCTCCATG 118879 Query 117241 TGAATACCGATTGAGACCCGCATAAACATGT 117271 || ||||| | | ||| ||||| | ||||| Sbjct 118880 TGGATACCAACAGCGACGCGCATGAGCATGT 118910 >seq50 Length=575836 Score = 129 bits (142), Expect = 7e-25 Identities = 304/454 (67%), Gaps = 10/454 (2%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || || ||||||||||||||||| ||||| || | || ||| |||||||| Sbjct 303184 GTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATGTTCTCCAT 303243 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || ||||| | | ||| | | ||| || |||| ||| ||| Sbjct 303244 GAAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTG--GGGTTGCCAAGAGCCAGGAGCAGA 303301 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || || | |||| |||| ||||||| |||| || ||||||||||| || Sbjct 303302 CGGTCGGCGACGAACTCGATGTACTGGCACATGAGAGTAGCGTTCATACCGAGTAGTGCG 303361 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || ||||| || || | | |||| ||| |||||| || || || || | |||||| Sbjct 303362 CAGGGGAGAGCATCGGACAGGAACTCCTGCTCAATCTCGACGGCCTCGGTGATGATGGCC 303421 Query 127469 TGAATAGTGTCCACCCCAGGTC---TATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAAC 127525 || | || || | || | | ||| | | || || || || |||||| Sbjct 303422 TGCACAGCATCTTTGCTTGGACGGTTGTTGAGCAGAGAGAACAACAGA--CA-AGCAAAG 303478 Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585 ||| ||| | ||||||||||| || ||||| ||||| || ||| ||||| ||||| Sbjct 303479 TCTGTGTGCATGCCCTCGTCACGAGAAATGAGCTCATTAGAAAAGGTAAGACCGGGCATC 303538 Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645 ||||| |||||||||| |||||| || | || || ||| ||||||||| ||||| Sbjct 303539 AGACCACGCTTCTTCAGCCAGAAGATGGACGCGAACGATCCACTGAAGAAGATGCCCTCG 303598 Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 || || || |||| ||||| | ||| |||| Sbjct 303599 ACGGCGGCAAAGGCAACGAGACGGTTGGCGAAGG 303632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504607932080