Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq249 149 1e-30 seq50 141 1e-28 >seq249 Length=183263 Score = 149 bits (164), Expect = 1e-30 Identities = 451/682 (66%), Gaps = 11/682 (2%) Strand=Plus/Plus Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896 ||||| || || ||||||||||||| | | |||| | || ||| |||||||||||| Sbjct 117149 TCTTGGTCGACGGTGAACTGAATGGGGGCCGAAGCAGCCATGGTTCGGAGATAGTACATG 117208 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 |||||||| || || || ||| ||| | ||||||||| | | |||| || | | Sbjct 117209 CCGGTCTTGAGACCAAGCTTCCATCCGGCGAAGTGCATGGAGGTGATCTTGCCCATGGTA 117268 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 || || |||||| |||||||| ||||| ||||| ||| ||||| || || || || Sbjct 117269 GGCTCCTTCATGTGGATGTTCAGTGACTGAGACTGGTCAATG-AAGGCACCACGGTCAGC 117327 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG-AACACGTCTCTGG 204074 |||||| | || ||||| |||||| || ||||| || |||||| | | |||| || Sbjct 117328 GGCCATCTGAATGATGGTACGCTGCGAGATTTCCCAGACAGTCTTGTATAAGGTCT-TGA 117386 Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 | | | ||| | | | | | || ||| || || |||||| || | | || Sbjct 117387 TCTCATCAGGGATGT-TGGGGATGCGCTGGATAGAACCACCGTCGGCGATGATGCGGTTC 117445 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | ||| ||| | |||| || || ||| | || |||||||| Sbjct 117446 TTCATGTTCTCGGTCCAAAGACCCATGTCGACAAGATCCTTGAGCAACCAGGGGTTGACA 117505 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || | ||||| | || | | | | ||| ||| |||| ||||| Sbjct 117506 ACCTGGAACTCACCAGCGAGCACACGACGAGAGTAGATGTTTGATGTGTATGGCTCGAAG 117565 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 |||||||||||||| ||||| | ||| ||| |||||||| || || | |||||| Sbjct 117566 CACTCGTTGTTGCCGAGGATCTGGGAAGTGGAGGCAGTGGGCATAGGTGCAACGAGCAGA 117625 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 |||||||| ||||| | | | || | | |||||| || | ||| || | | Sbjct 117626 GAGTTGCGGACACCATGCTGTGCGATCTTCTCCTTCAGCGAAGCCCAATCCCAGAGGTCG 117685 Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATG-CCTTGACTGACTGGGC-TGCCCT 204431 | || | || ||||||||||| |||| || || || ||| | ||||| ||| | Sbjct 117686 GTAGGAGTGACACCCCACATGTCATACTG-GAGCTGACCCTGA-GAAATGGGCGAGCCTT 117743 Query 204432 TGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491 |||||| | ||||| | ||| | || | | ||| || | || || ||| | Sbjct 117744 CGTACGTGGTGTAAGGGCCAAGCTCCTTGGCGATGTCGCAGGAAGAGGTCAAGGCAGCGT 117803 Query 204492 AGTACATGGTCTCAAAGATCTG 204513 ||| |||||||| |||||||| Sbjct 117804 GGTAGATGGTCTCGAAGATCTG 117825 Score = 91.5 bits (100), Expect = 2e-13 Identities = 206/307 (67%), Gaps = 2/307 (1%) Strand=Plus/Plus Query 205072 GTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATTTTTTGGGACA 205131 |||||| || || || || ||||| ||||| || ||||| || | ||||| || Sbjct 118303 GTACAGGGCAACGAACTCGTCGCCGTAGACGTCAGCAAGACCTGGGCACTCGTTGGGGCA 118362 Query 205132 CATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGTCGCTGATCCACAG 205191 ||| || | |||| || || | || | || ||| || || ||| ||||||||| Sbjct 118363 CATAAGCGTCCACTCGCCATTCTCCTGGACACGCTGCATGAAAAGATCGGGGATCCACAG 118422 Query 205192 GCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAG 205251 | | || |||| || || || | || | || | || ||||||| ||||||| || Sbjct 118423 GGCATAGAACAAGTCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTCCTCAAGTCGAG 118482 Query 205252 CCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCT 205310 |||||| | | ||| |||||||| ||||| | | | ||| | || || || | || Sbjct 118483 G-AAGCCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGGGCGCT 118541 Query 205311 TGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCA 205370 |||| ||||||||||| || ||| | | |||| | || || ||||| || | | Sbjct 118542 TGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGTAGACACGAAGCATAGGGATGA 118601 Query 205371 GACCGTT 205377 ||||||| Sbjct 118602 GACCGTT 118608 >seq50 Length=575836 Score = 141 bits (156), Expect = 1e-28 Identities = 334/501 (67%), Gaps = 15/501 (3%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| | | || || |||||||| |||| ||||| Sbjct 303199 CTTCTCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATGTTCTCCATGAAGTCGAAGGGGTT 303258 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 || ||| ||| ||| || || |||||| |||| | ||| || || || || Sbjct 303259 GGTCGCGTTGTAGTACTTGGGGTTGCCAAGAGCCAGGAGCAGACGGTCGGCGACGAACTC 303318 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| ||||| | | ||| || || || || |||||| || || || Sbjct 303319 GATGTACTGGCACATGAGAGTAGCGTTCATACCGAGTAGTGCGCAGGGGAGAGCATCGGA 303378 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT---CTGCGAGACACGTTCGTA 159885 ||| ||||||| |||||||||||| || ||||| | || |||| ||| | | Sbjct 303379 CAGGAACTCCTGCTCAATCTCGACGGCCTCGGTGATGATGGCCTGC---ACA-----GCA 303430 Query 159886 CCCCGGCTTGCCCAAAATGTGGTCCTTA---AACAGGAGGCACGCAAAGTCGCAGTGCAG 159942 | ||||| | ||| | | | |||| || || |||||||| ||||| Sbjct 303431 TCTTTGCTTGGAC-GGTTGTTGAGCAGAGAGAACAACAGACAAGCAAAGTCTGTGTGCAT 303489 Query 159943 TCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGG 160002 |||||||| ||||| |||| ||| || || | | | || || ||||| | |||||| Sbjct 303490 GCCCTCGTCACGAGAAATGAGCTCATTAGAAAAGGTAAGACCGGGCATCAGACCACGCTT 303549 Query 160003 TTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAA 160062 || ||||| || |||| ||| || | || || || ||||| ||||| ||||| ||||| Sbjct 303550 CTTCAGCCAGAAGATGGACGCGAACGATCCACTGAAGAAGATGCCCTCGACGGCGGCAAA 303609 Query 160063 CGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTC 160122 || ||||| | | | || | | ||| |||| | |||| | | |||||| || Sbjct 303610 GGCAACGAGACGGTTGGCGAAGGTAGAGTTCTTGTCCGAGATCCATCGTAGGGCCCAGTC 303669 Query 160123 AGCCTTCTTTGCGATGCACGG 160143 |||||||| |||||| || Sbjct 303670 GGCCTTCTTGCGGATGCAGGG 303690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795151840469280