Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq63 358 8e-94 seq249 111 2e-19 seq108 100 4e-16 seq100 89.7 7e-13 >seq63 Length=31160 Score = 358 bits (396), Expect = 8e-94 Identities = 791/1193 (66%), Gaps = 60/1193 (5%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| ||||| ||||| | || ||||| || || |||||||||||||| Sbjct 13783 TCACCAGACAGGATAGCGGCCTGGACGGCGGCACCGTAGGCAACAGCCTCATCGGGGTTG 13842 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || | || || | ||| | |||| || ||| Sbjct 13843 ATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGAACCTTGGGG 13902 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | ||||| || | || || || |||||||| | Sbjct 13903 ATACGGGTAGAACCACCAACGAGGACGATCTCGTGGACGGAAGACTTGTCGATCTTAGCA 13962 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || ||||| || ||||| ||||| | |||| || || || Sbjct 13963 TCGCGGAGGACGCGCTCGACGGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCAGAGCTCT 14022 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || ||||| |||||||| || || || ||||| || | || ||||| | ||||| || Sbjct 14023 TCGAAACGAGCACGGGTGATTGAGGTGTAGAAGTCGATACCCTCGTACAGGGAATCGATC 14082 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || || | || || || | ||| || | || ||||| || | ||| || || || || Sbjct 14083 TCGATAGAGGTCTGAGCGGACGAGGAAAGAGTGCGCTTGGCCCTCTCGCAGGCGGTACGC 14142 Query 7370 AAACGACGAAGG--GCACGCG-----------------------GGTTAC---------- 7394 | ||| || ||| || |||| ||||| Sbjct 14143 AGACGGCGGAGGGCGCGCGCGTTGGAAGTCAAATCCTAGCGTGGGGTTAGTCAATGAATC 14202 Query 7395 ----------CG---GAAATAT------CTTTCTTATGTTTACGTTTAAACTCTTCAGAG 7435 || || || | | ||||||||||| | ||| || || | | | Sbjct 14203 TTTGAGATTGCGATTGAGATTTTACATACCTTCTTATGTTTTCTTTTGAATTCATTGGTG 14262 Query 7436 AAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTC 7495 ||||| | || | ||||| || |||||||||||||| || || || || ||| Sbjct 14263 AAGTGGTTTACAAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCTCCAGCAGTC 14322 Query 7496 GCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCA 7555 | ||||| || |||||||| | |||||| | || | || ||||| || ||||||||| Sbjct 14323 GACTTGACCTCGAAGATACCCTCCTCAATGGTCAAGAGGGAGACATCGAATGTACCACCA 14382 Query 7556 CCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCG 7615 |||| || || ||||| ||||| ||| | || | |||| ||||||||||| || Sbjct 14383 CCCAAATCGAAGATGAGGACGTTACGCTCGCCCTCAGTCCTCTTGTCGAGACCGTAGGCA 14442 Query 7616 ATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC 7675 || || || || || || || || || ||||| || ||| ||||||||||| | Sbjct 14443 ATGGCAGCGGCGGTAGGCTCGTTGATGATACGGAGGACGTTAAGGCCAGCAATGAGACCA 14502 Query 7676 GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCG 7735 ||||| || || || || |||||||| ||||| |||||||| ||||| || ||||| ||| Sbjct 14503 GCATCCTTAGTAGCCTGACGTTGCGAGTCGTTGAAGTAGGCAGGGACTGTGACGACGGCG 14562 Query 7736 TCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATC 7795 | |||| | |||||| || || || || | || |||| ||| ||||||||| Sbjct 14563 TTGTTGACGGTACCACCGAGGTAGGACTCAGCAGTCTCCCTCATCTTGACAAGAACCATG 14622 Query 7796 GATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATG 7855 || || |||||||| | | || ||| || || || || || || | ||| | | Sbjct 14623 GACGAGATCTCTTCGGGTGTGAAGGTCTTCTCCTCGCCCTTGAACTCGACCTGAATGACG 14682 Query 7856 GGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACC 7915 || || |||| | | ||| ||||| | | | | ||||| ||| | |||||| Sbjct 14683 GGCTT-GCCGC--CCTTGTCGATGACCTTGAAAGGGAAGTGCTTCATGTCGGCCTGGACC 14739 Query 7916 TGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGG 7975 | ||| | ||||| | |||||| | |||||| || ||||| |||||||| | ||| Sbjct 14740 TCAGCGTCGGCGAACTTACGTCCGATCAAACGCTTAGCGTCAAAGACTGTGTTGATAGGG 14799 Query 7976 TTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAAC 8035 |||||||| ||||||||||| | ||| || || || || || | | ||||| || Sbjct 14800 TTCATGGCGACCTGGTTCTTCGCGGAGTCACCAATGAGGCGCTC---AGTGTCCGTGAAT 14856 Query 8036 GCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCG 8095 |||||| |||| || || ||||| || || ||||| || ||||| ||||| | |||||| Sbjct 14857 GCGACGAACGAGGGAGTAGTTCGGTTACCCTGGTCATTGGCAATGATTTCGATGCGGTCA 14916 Query 8096 TTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 | | ||| || ||||| || ||||| ||||| | |||||||||||| || Sbjct 14917 TCGCGGAAGATACCAACGCAAGAGTACGTGGTTCCGAGATCAATACCGATAGC 14969 >seq249 Length=183263 Score = 111 bits (122), Expect = 2e-19 Identities = 228/337 (68%), Gaps = 4/337 (1%) Strand=Plus/Plus Query 105736 GCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCA 105795 ||||| ||| || || || | ||| || || | ||| | ||||||||||| ||||| Sbjct 118568 GCGGTGTTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGATGTTCCATTGGTTCCT 118627 Query 105796 CGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCAC 105855 | |||| || | | ||||| | ||| || | | |||||||| ||||| | Sbjct 118628 CCGATATAGGAGCCAGTGGCACGAATGCGGTGCACATTGAGACCAATACCGCCAGCAGTC 118687 Query 105856 TTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTA 105915 || ||| |||||| || | ||| ||||| |||||||| || || |||||||| Sbjct 118688 TTGGAGATCAACGCACAAGTCTTCAATGTGTCGTAGATACCGTCAATGCTGTCTTCCTTC 118747 Query 105916 TTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTT 105975 | | || ||||| || |||||||||||||| ||||| || || ||||| || || Sbjct 118748 ATGTCGATGAGGAAGCAAGATGACATTTGTGGGGATGGTGTGCCCGCGTTGAAGAGCGTC 118807 Query 105976 GGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGATCA 106035 || | || || |||| | || ||| | |||||||| || | | | | ||| Sbjct 118808 GGCGACGCGTGTGTGAAGTACTTTTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCA 118867 Query 106036 ATATCGTGTCCA--TGAATACCAATAGCGACGCGCAT 106070 || || |||| || ||||||| |||||||||||| Sbjct 118868 ATGTC--CTCCATGTGGATACCAACAGCGACGCGCAT 118902 >seq108 Length=158744 Score = 100 bits (110), Expect = 4e-16 Identities = 158/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC--TT 7592 || ||||| || ||||||||||| || || | ||||| |||||| | || | || Sbjct 120020 GAGACATCGAAAGTACCACCACCGAGATCGTAGATGAGGACGTTCCTCTCCTTCTCGGAC 119961 Query 7593 TGTTCTTA-TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 | | | | |||||||||| |||||||| || || || || || || || ||||| ||| Sbjct 119960 TTTCCGGAGCCGAGACCGTAAGCGATAGCGGCAGCGGTAGGCTCGTTGATGATACGGAGA 119901 Query 7652 CAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAG 7711 ||| || |||||||| | | || || || || || || || || ||||| ||| Sbjct 119900 ACGTTGAGACCAGCAATGGCACCGGCGTCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAG 119841 Query 7712 TAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| ||||| || | ||| || | | ||| ||||| ||||| Sbjct 119840 TAGGCGGGGACGGTGATGACGGCCTTCTCGACCTTCTTGCCGAG 119797 >seq100 Length=90903 Score = 89.7 bits (98), Expect = 7e-13 Identities = 215/326 (66%), Gaps = 6/326 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||| | || || || || ||||| ||||| || |||| ||| Sbjct 41052 TCGAAGTCCTCACCACCGAGATGGGTGTCACCGTTGGTCGACTTGACCTCGAAGACACCG 41111 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || | | | || | ||| || ||||||||||| || || | | | ||| Sbjct 41112 TTCTGGATCTCGAGGATGGAGATATCGAAGGTACCACCACCAAGATCGTAGACGGCGACG 41171 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| ||| || ||| || |||||||| || | || || || || || || Sbjct 41172 ------ACGTTGTCAGTGGCCTTGTCCAGACCGTAAGCAAGGGCGGCAGCGGTAGGCTCG 41225 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | ||| ||| ||| || ||||| || | || || || || || || || Sbjct 41226 TTGACGACACGGAGAACGTTGAGACCAGCGATCTGACCGGCGTCCTTGGTGGCCTGACGC 41285 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || ||||| |||| | |||| ||||| || | Sbjct 41286 TGAGAGTCGTTGAAGTAGGCGGGGACAGTAACGACGGCGTTCTTGACGTTCTTGCCCATG 41345 Query 7757 TACGATTCCGCGATATCTTTCATTTT 7782 || || || || | || ||||| || Sbjct 41346 TAGGACTCGGCAGTCTCCTTCATCTT 41371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130116563920