Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq249 178 2e-39 seq50 104 3e-17 seq72 93.3 5e-14 >seq249 Length=183263 Score = 178 bits (196), Expect = 2e-39 Identities = 1126/1782 (63%), Gaps = 53/1782 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||||||| ||||| ||||||| ||||| | |||||||| ||| || ||||| | Sbjct 118918 CCCACAGCACATGCTCATGCGCGTCGCTGTTGGTATCCACATGGAGGACATTGAGAAGGC 118859 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCT 111729 | |||||||||||| | ||||| | ||| |||| ||||| | || || |||| Sbjct 118858 CATCGAGACATACGACTACATGTCGCAAAAGTAC-TTCACACACGCGTCGCCGACGCTCT 118800 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||||| || |||||| || |||||||| ||| ||||| || | | ||||| | Sbjct 118799 TCAACGCGGGCACACCATCCCCACAAATGTCATCTTGCTTCCTCATCGACATGAAGGAAG 118740 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGG 111845 | || | || || |||| ||| | |||| ||||| ||||| ||| Sbjct 118739 ACAGCATTGACGGTATCTACGACAC----ATTGAAGACTTGTGCGTTGATCTCCAAGACT 118684 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGT 111905 ||||| ||||| || | | | || | | |||| || ||| |||| Sbjct 118683 GCTGGCGGTATTGGTCTCAATGTGCACCGCATTCGTGCCACTGGCTCCTATATCGGAGGA 118624 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 || ||||| ||| | ||| | || || |||||||| || | ||| ||| || ||| Sbjct 118623 ACCAATGGAACATCGAACGGTCTCATCCCTATGCTTCGTGTCTACAACAACACCGCCCGC 118564 Query 111966 TATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || || |||| | ||| ||| || | |||| |||| || ||||||||| Sbjct 118563 TACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCGTTCGCCATCTACCTCGAGCCATGG 118504 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||||| || || | | ||||| || ||| | ||||| || | ||||||| | | Sbjct 118503 CACGCTGACGTCTTCGGCTTCCTCGACTTGAGGAAGAACCACGGCAAGGAGGAGGTTC-G 118445 Query 112083 TGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||| ||||| | |||| || || ||||| || ||||| |||||| || | || |||| Sbjct 118444 TGCTCGCGACTTGTTCTATGCCCTGTGGATCCCCGATCTTTTCATGCAGCGTGTCCAGGA 118385 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 || |||| | ||| | || | || || || || || ||||| | || | | || Sbjct 118384 GAATGGCGAGTGGACGCTTATGTGCCCCAACGAGTGCCCAGGTCTTGCTGACGTCTACGG 118325 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG-GA-AGAA----AGTCGGGCGACTGC 112255 || ||||| | ||||| ||| ||||| ||| || |||| |||| | ||| | Sbjct 118324 CGACGAGTTCGTTGCCCTGTACGAGAAGTATGAGAGAGAGAATAAGGGTCGCGAGAC--C 118267 Query 112256 GACGGTG-CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 | | ||| ||| || | ||| | || || ||| || |||| ||||||||||| | Sbjct 118266 GTCCGTGCCCAAAAGC-----TCTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGCA 118212 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 || | ||||||||||| || ||| ||| ||||| || || ||||| | ||| Sbjct 118211 ACCCCTTCATGCTTTACAAGGATGCCGCCAACAGGAAGAGCAACCAGAAGAACCTCGGTA 118152 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 || || |||||||| || || || ||| | |||| |||| ||||||| | Sbjct 118151 CCATTCGCAGCTCCAACCTGTGCACTGAGATCATCGAATACACAGCGCCAGATGAGGTTG 118092 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACA 112493 | || || ||| | || || | ||||| || || ||| || | || || Sbjct 118091 CCGTTTGCAACTTGGCTTCCGTTGCTCTGCCATCGTTTGTTGACTACA-AGCGGGGTGTG 118033 Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACG-AAAACTGTCACAAAAAACCTAAACAGAGT 112552 || || | | || |||||||| || | | |||| || ||||| |||| | Sbjct 118032 TTCGACTTCAAGAAGCTCCACGAGGTCGTGCAGGTCTGT-ACCCGCAACCTCAACAAGAT 117974 Query 112553 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 ||||| ||| ||||| || ||| || || || | | ||| | || Sbjct 117973 CATTGAGGTCAATCACTACCCTGTCGAGGAGGCACGCCGTAGCAACTTCCGTCACAGGCC 117914 Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA 112672 || ||||| ||||| |||||||| || |||| ||| || | ||| | || || Sbjct 117913 TATCGGTCTGGGTGTACAAGGTCTTGCCGATGCTTTCCTTGCTCTTCGTTTGCCTTTCGA 117854 Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732 || ||| || ||| | |||| | | || || ||||| || || ||||| || || Sbjct 117853 GTCTCCCGAGGCCAAGAAGCTCAACACCCAGATCTTCGAGACCATCTACCACGCTGC-CT 117795 Query 112733 TGAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 ||| | ||| || | || ||| ||| || || || | || || || Sbjct 117794 TGA--CCTCTTCCTGCGACATCGCCAAGGAGCTTGGCCCTTACACCACGTACGAAGGCTC 117737 Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACT 112848 || ||| || || ||| || | ||| ||||||| || | || | | | || Sbjct 117736 GCCCATTTCTCAGGGTCAGCTCCAGTATGACATGTGGG-GTGTCACTCCTACCGACCTCT 117678 Query 112849 ACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908 || |||| | || ||||| ||| || | ||| | || ||| ||| | Sbjct 117677 GGGATTGGGCTTCGCTGAAGGAGAAGATCGCACAGCATGGTGTCCGCAACTCTCTGCTCG 117618 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968 | ||||| ||||| || |||||||| | || ||| | || || || || ||||| || | Sbjct 117617 TTGCACCTATGCCCACTGCCTCCACTTCCCAGATCCTCGGCAACAACGAGTGCTTCGAGC 117558 Query 112969 CCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA- 113026 | ||||| | |||||||| ||| | | ||||| || ||||| | ||||||| Sbjct 117557 CATACACATCAAACATCTACTCT-CGTCGTGTGCTCGCTGGTGAGTTCCAGGTTGTCAAC 117499 Query 113027 --CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 113084 | | ||| |||| || || || ||||| ||| || || | |||||| | Sbjct 117498 CCCTGGTTGCTCAAGGAT---CTTGTCGACATGGGTCTTTGGACCGAGAACATGAAGAAC 117442 Query 113085 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAG 113144 | ||| | | |||||||| || || || | || || ||||| || ||| Sbjct 117441 CGCATCATCGCCGACGGTGGTTCTATCCAGCGCATCCCCAACATCCCTGATGAGATCAAG 117382 Query 113145 AAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGAT 113204 | || ||| || || ||||||||| | | ||||| | |||||||| || Sbjct 117381 ACCTTATACAAGACTGTCTGGGAAATCTCGCAGCGTACCATCATTCAGATGGCCGCTGAC 117322 Query 113205 CGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGA 113262 |||||| ||||||||| | |||| ||| |||| | |||| | || || | Sbjct 117321 CGTGGTGCCTTCATTGACC--AGTCTCAGTCACTGAACATCCACATGAAGGAGCCTACCA 117264 Query 113263 TGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGT 113322 || |||| || | || |||||| | | | |||||| |||||||| || || |||| Sbjct 117263 TGGGCAAGATCACCTCCATGCACTTCGCCGGATGGAAGCTTGGTCTCAAGACCGGCATGT 117204 Query 113323 ATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 113364 | || |||||| | | ||| || ||| |||||||||| Sbjct 117203 ACTATCTCCGAACCATGGCTGCTTCGGCCCCCATTCAGTTCA 117162 >seq50 Length=575836 Score = 104 bits (114), Expect = 3e-17 Identities = 300/454 (66%), Gaps = 12/454 (3%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||| || | || ||| | || ||||| || ||||| ||||||||| ||| || | Sbjct 303632 CCTTCGCCAACCGTCTCGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGTGGATCGT 303573 Query 102232 TCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || ||| | || | ||||| |||||||| ||||| ||||| ||||| ||| || || Sbjct 303572 TC-GCGTCCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTTTCTAAT 303514 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAATTA 102350 ||||| || |||||||||||||| | ||| ||| ||||| || || || | Sbjct 303513 GAGCTCATTTCTCGTGACGAGGGCATGCACACAGACTTTGC-TTG--TCTGTTGTTCTCT 303457 Query 102351 TTGCGTATTAA---ACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAG 102407 ||| | || |||| | || || | || | || | | || ||||| ||| Sbjct 303456 CTGCTCAACAACCGTCCAAGCAAAGATGCTGTGCAGGCCATCATCACCGAGGCCGTCGAG 303397 Query 102408 ATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAA 102467 |||||| ||| ||| | | ||||| || || ||||| || |||||||||| || Sbjct 303396 ATTGAGCAGGAGTTCCTGTCCGATGCTCTCCCCTGCGCACTACTCGGTATGAACGCTACT 303337 Query 102468 AAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCT 102527 |||| | | || || |||| || | || | || | | | || || | Sbjct 303336 CTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGTCTGCTCCTG--GCTCTTGGCAACC 303279 Query 102528 CCAATT--TGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGA 102585 |||| | | ||| | | || || || ||||||||||||||||| || | ||| | Sbjct 303278 CCAAGTACTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCA 303219 Query 102586 AGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 102619 |||| ||||||||||| ||| | ||||| || || Sbjct 303218 AGACCAACTTCTTCGAGAAGCGTGTTGGTGATTA 303185 >seq72 Length=147729 Score = 93.3 bits (102), Expect = 5e-14 Identities = 161/228 (71%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGT-TGATTTTCGCGAGCGACTTCAAAGA 16122 |||||| ||||| |||||||||| |||||| ||| || | || ||| || | || | Sbjct 126897 GGCATCGATCTCGTCAATGAAGATGATGCAGGGTGTGCTCTT-GCGCGCATTGGCGAACA 126839 Query 16123 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGA 16180 || ||||| ||| || || ||||| ||||||||||| || || | | | || | Sbjct 126838 AGTCGCGTACTCGCGAAGCACCGACACCTACAAACATCTCGACGAACTCGGAACCGCTG- 126780 Query 16181 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 16240 ||| | || |||||| ||| ||| || || || | || ||| || || |||||||| Sbjct 126779 ACACT-GAAGAAGGGCACACCAGACTCGCCAGCCGTAGCCTTGGCAAGCAGCGTCTTACC 126721 Query 16241 CGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||||| || ||| | |||| ||||| || |||||||| ||||| Sbjct 126720 GGTACCGGGGGGACCAGACAGGACAGCACCGCGAGGAATCTTTGCGCC 126673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739777363360