Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq249 158 1e-33 seq50 120 4e-22 seq141 95.1 1e-14 >seq249 Length=183263 Score = 158 bits (174), Expect = 1e-33 Identities = 309/454 (68%), Gaps = 16/454 (4%) Strand=Plus/Plus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || ||||| ||||| || || ||||||||| ||||||| || | ||||| || | | Sbjct 117194 CGGAGATAGTACATGCCGGTCTTGAGACCAAGCTTCCATCCGGCGAAGTGCATGGAGGTG 117253 Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAAT 109527 | ||| | || || || ||| | ||||| ||||||||||| || ||||| Sbjct 117254 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTCAGTGACTGAGACTGGTCAATGAAG 117313 Query 109528 CGACCACGATCAGCCGCCATGTCGATGAT---ACACTTTTGGCTA-ATTTCCCAGACAGT 109583 |||||| ||||| ||||| | ||||| || || || | |||||||||||||| Sbjct 117314 GCACCACGGTCAGCGGCCATCTGAATGATGGTACGCT----GCGAGATTTCCCAGACAGT 117369 Query 109584 CTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGC 109643 |||||| || ||||||| ||||| || |||| |||| || ||||| ||||| | Sbjct 117370 CTTGTATAAGGTCTTGATCTCATCAGGGATGTTGGGGATGCGCTGGATAGAACCACCGTC 117429 Query 109644 CTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT---- 109699 | ||| | | |||||| | | | ||| ||||| | | ||||| | Sbjct 117430 GGCGATGATGCGGTTCTTCATGTTCTCGGTCCAAAGACCCATGTCGACAAGATCCTTGAG 117489 Query 109700 CAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGT 109759 |||| || |||||| || || |||||||| || || || |||||||| Sbjct 117490 CAACCAG----GGGTTGACAACCTGGAACTCACCAGCGAGCACACGACGAGAGTAGATGT 117545 Query 109760 TAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGG 109819 | | ||||| || ||||| ||||| |||||||| ||||| || | |||||| || |||| Sbjct 117546 TTGATGTGTATGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGGGAAGTGGAGGCAGTGG 117605 Query 109820 GCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 |||| || || | ||| ||| ||| |||| ||| Sbjct 117606 GCATAGGTGCAACGAGCAGAGAGTTGCGGACACC 117639 Score = 156 bits (172), Expect = 5e-33 Identities = 522/803 (65%), Gaps = 17/803 (2%) Strand=Plus/Plus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||||| || || | ||||| || | | ||| ||| | |||||||| | Sbjct 118061 GGCAGAGCAACGGAAGCCAAGTTGCAAACGGCAACCTCATCTGGCGCTGTGTATTCGATG 118120 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || || || |||| |||||| || |||| ||| | ||||||||| || || | Sbjct 118121 ATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTCCTG 118180 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 ||| |||||||| || |||||| | ||| | ||||| || ||||| | || ||| ||| Sbjct 118181 TTGGCGGCATCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATG 118240 Query 110461 GCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTC-CTC-CTCGTACT 110518 || | ||| | | ||| |||| || || | | | ||| ||| ||| |||| Sbjct 118241 GCATACCAGAGCTTTTGGGCACGGACGGTCTCGCGACCCTTA--TTCTCTCTCTCATACT 118298 Query 110519 TGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC-CTTGTCG 110577 | ||||| | | | || || | ||||| || |||| |||||| | || || || | Sbjct 118299 TCTCGTACAGGGCAACGAACTCGTCGCCGTAGACGTCAGCAAGACC-TGGGCACTCGTTG 118357 Query 110578 GGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATC 110637 || || | || | ||| | ||| ||||| || | || |||||| || || || ||| Sbjct 118358 GGGCACATAAGCGTCCACTCGCCATTCTCCTGGACACGCTGCATGAAAAGATCGGGGATC 118417 Query 110638 CACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGC 110697 |||| || |||| | ||| || |||| |||| || | || ||||| | | Sbjct 118418 CACAGGGCATAGAACAAGTCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTCCTCAAG 118477 Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTA 110757 || | ||| | | || || | ||||||||| ||||| |||| |||| | || | Sbjct 118478 TCGAGGAAGCCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACC---A 118534 Query 110758 CGACGA------CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATA 110811 | || || |||||| || ||||| || ||| ||| |||| | |||||| Sbjct 118535 GGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGTAGACACGAAGCATA 118594 Query 110812 GGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATG 110871 || || | || | ||| ||||| || || | || ||| | ||||||||||| Sbjct 118595 GGGATGAGACCGTTCGATGTTCCATTGGTTCCTCCGATATAGGAGCCAGTGGCACGAATG 118654 Query 110872 TCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAG 110930 ||| | || | ||||||||| || || ||| || |||| | ||| | | Sbjct 118655 CGGTGCACATTGAGACCAATACCGCCAGCAGTCTTGGAGATCAACGCACAAGTCT-TCAA 118713 Query 110931 TGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACAT 110990 ||| | || ||||| ||||| ||| |||| || | || || |||||||| ||||| Sbjct 118714 TGTGTCGTAGATACCGTCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACAT 118773 Query 110991 CTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG 111050 || || || || ||||| |||||||| || || | ||| || |||| ||| Sbjct 118774 TTGTGGGGATGGTGTGCCCGCGTTGAAGAGCGTCGGCGACGCGTGTGTGAAGTACTTTTG 118833 Query 111051 GGACATCTTGTTGTATGTGTCGA 111073 ||||| | || |||||| |||| Sbjct 118834 CGACATGTAGTCGTATGTCTCGA 118856 >seq50 Length=575836 Score = 120 bits (132), Expect = 4e-22 Identities = 332/498 (67%), Gaps = 17/498 (3%) Strand=Plus/Plus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 || ||||| || | ||| |||||||| || ||||| || | || |||||||| ||||| Sbjct 303185 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATGTTCTCCATG 303244 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAG-ATTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || || || | | ||| || | | | ||||| |||| || ||||| Sbjct 303245 AAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTGGGGTTG-CCAAGAGCCAGGAGCAGACG 303303 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 |||| ||| ||||||| || | | |||| | |||||||| | || || Sbjct 303304 GTCGGCGACGAACTCGATGTACTGGCACATGAGAGTAGCGTTCATACCGAGTAGTGCGCA 303363 Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTG 119446 |||||||||||| | ||| | || ||| ||||| || || || | | ||||| || Sbjct 303364 GGGGAGAGCATCGGACAGGAACTCCTGCTCAATCTCGACGGCCTCGGTGATGATGGCCTG 303423 Query 119447 AATAGTTTCTGTCGATGGT---TTGTTTCTCA-AGAGTTTAAACAACTCTACGGCAAATT 119502 | || ||| | ||| ||||| || |||| |||||| ||||| | Sbjct 303424 CACAGCATCTTTGCTTGGACGGTTGTTGAGCAGAGAG----AACAACAGACAAGCAAAGT 303479 Query 119503 CTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGA 119562 || || | || || || ||||| |||||||||||| ||| ||| || ||||| | Sbjct 303480 CTGTGTGCATGCCCTCGTCACGAGAAATGAGCTCATTAGAAAAGGTAAGACCGGGCATCA 303539 Query 119563 GTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAAC-TTCCAGAAAAGAAGATGCCCTCC 119621 | || | ||||| ||||| ||||||| || ||| |||| |||||||||||||| Sbjct 303540 GACCACGCTTCTTCAGCCAGAAGATGG-ACGCGAACGATCCACTGAAGAAGATGCCCTCG 303598 Query 119622 ACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTT 119677 || ||| || || | ||||| | || ||||| ||| |||||| || ||| Sbjct 303599 ACGGCGGCAAAGGCAACGAGACGGTTGGC-GAAGGTAGAGTTCTTGTCCGAGATCCATCG 303657 Query 119678 GAGAGCCCAGTTGGCCTT 119695 || ||||||| |||||| Sbjct 303658 TAGGGCCCAGTCGGCCTT 303675 >seq141 Length=128443 Score = 95.1 bits (104), Expect = 1e-14 Identities = 216/323 (67%), Gaps = 4/323 (1%) Strand=Plus/Plus Query 11682 AGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAG 11741 |||||| | |||||||||||| |||||| || ||||| || || ||| || Sbjct 14146 AGCGTCGAGCTCATCGATGAAGACGATAGCAGGAGCCTTGGCTCGAGCAGTAGTGAAGAG 14205 Query 11742 TTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACA 11801 || || || || || || |||||||| ||| | | |||| | || | | |||| Sbjct 14206 CTCGCGAACGCGTTTGGCACCAACACCAACGTAGACCTCATCAAACTCGGATCCAGACAT 14265 Query 11802 CTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGT 11861 | | ||| || ||| || ||| ||||| | || |||||||| || |||||||| || Sbjct 14266 GTAGAAGAACGGGACACCAGCCTCGCCAGCAACAGCACGAGCGAGCAGTGTCTTACCGGT 14325 Query 11862 ACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA--CTTCCAAAGTAG 11919 |||||| | ||| ||| | | | || ||||| | || | ||| ||| | ||| Sbjct 14326 ACCAGGAGGGCCAATGAGCAAGACACCCTTGGGGAGCCTGCCGCCAAGCTT--ATTGTAA 14383 Query 11920 CGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATA 11979 ||||| || | ||| ||||| || || | || || |||||||| || |||| | Sbjct 14384 CGCTCGGGATGCTTCAGGAAATCGACGACATCGAGGAGCTCCTCCTTTGCCTCGTCGCAA 14443 Query 11980 CCCTCAACATCGGTGAAACGAGT 12002 || | || ||| | |||||||| Sbjct 14444 CCGTGGACGTCGCTAAAACGAGT 14466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973511576400