Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq63 113 4e-19 >seq63 Length=31160 Score = 113 bits (124), Expect = 4e-19 Identities = 392/603 (65%), Gaps = 19/603 (3%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| ||||| ||| | |||||||| || ||| |||||| | | | ||| Sbjct 14969 GCTATCGGTATTGATCTCGGAACCACGTACTCTTGCGTTGGTATCTTCCGCGATGACCGC 14910 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 | ||||| ||||||||||| || |||||| |||||||||| || | || | |||||| Sbjct 14909 ATCGAAATCATTGCCAATGACCAGGGTAACCGAACTACTCCCTCGTTCGTCGCATTCACG 14850 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||| | | ||||||| | || || | || | | | || |||| ||| Sbjct 14849 GACACTGAGCGCCTCATTGGTGACTCCGCGAAGAACCAGGTCGCCATGAACCCTATCAAC 14790 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | ||||| ||||| ||||| || ||| | | || || | || ||||| Sbjct 14789 ACAGTCTTTGACGCTAAGCGTTTGATCGGACGTAAGTTCGCCGACGCTGAGGTCCAGGCC 14730 Query 550232 GATATGAAGCATTGGCCTTTCCA---AATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 || |||||||| | |||||| | || | || | || || || ||| | Sbjct 14729 GACATGAAGCACTTCCCTTTCAAGGTCATCGACAAGG---GCGGCAAGCCCGTCATTCAG 14673 Query 550289 G-CTACTCATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGGTTT 550346 | | | | | |||| | || | || |||| ||| | || || || |||||| Sbjct 14672 GTCGAGT--TCAAGGGCGAGGAGAAGACCTTCACACCCGAAGAGATCTCGTCCATGGTTC 14615 Query 550347 TAATGAAAATGAAACAAACAGC-CAGTGCT--TTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | | || |||| | || || ||| || | | |||| || | | || | Sbjct 14614 TTGTCAAGATGAGGGAGACTGCTGAGTCCTACCTCGGTGGT---ACCGTCAACAACGCCG 14558 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | | || || || || || || || ||||| |||||||| |||||||| |||||||| | Sbjct 14557 TCGTCACAGTCCCTGCCTACTTCAACGACTCGCAACGTCAGGCTACTAAGGATGCTGGTC 14498 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||||| ||||| || || ||||| ||||| || ||||| || ||||| |||| | Sbjct 14497 TCATTGCTGGCCTTAACGTCCTCCGTATCATCAACGAGCCTACCGCCGCTGCCATTGCCT 14438 Query 550524 ATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATT---GTGGAG 550580 | || || || || | ||| || | ||| || |||||||| |||| |||| | Sbjct 14437 ACGGTCTCGACAAGAGGACTGAGGGCGAGCGTAACGTCCTCATCTTCGATTTGGGTGGTG 14378 Query 550581 GTA 550583 ||| Sbjct 14377 GTA 14375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029278125035620