Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq249 331 2e-85 seq50 156 8e-33 >seq249 Length=183263 Score = 331 bits (366), Expect = 2e-85 Identities = 1279/1971 (65%), Gaps = 80/1971 (4%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || | | ||||||| |||| || |||||||||||||||||||| Sbjct 117158 ACGGTGAACTGAATGGGGGCCGAAGCAGCCATGGTTCGGAGATAGTACATGCCGGTCTTG 117217 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| ||| ||| | |||||| | |||| |||| || | Sbjct 117218 AGACCAAGCTT---CCATCCGGCGAAGTGCATGGAGGTGA---TCTT--GCCCA------ 117263 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 |||| | ||| | || || | |||||| |||||| |||||| ||||| | | Sbjct 117264 TGGT-AGGCTCCTT---CATGTGGATGTTCAGTGACTGAGACTGGTCAATGAAGGCACCA 117319 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | |||||||||||| | ||||| | ||| |||| ||||| || |||||| | | Sbjct 117320 CGGTCAGCGGCCATCTGAATGATGGTACGCTGCGAGATTTCCCAGACAGTCTTGTATAAG 117379 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC 212849 |||| || || |||| | ||||||| ||| | ||| || | || | | | Sbjct 117380 GTCTTGATCTCATCAGGGATGTTGGGGATGCGCTGGATAGAACCACCGTCGGCGAT--GA 117437 Query 212850 TGCAG--GCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAG 212907 ||| | ||||| |||| |||| || ||| || | || ||||| || | Sbjct 117438 TGCGGTTCTTCATGTTCTCGGTCCAAAGACCCATGTCGACAAGATCCTTGAGCAACCAGG 117497 Query 212908 GGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGG 212967 ||||||| | |||||| ||||| | |||||| | | ||| | |||||| ||||| | Sbjct 117498 GGTTGACAACCTGGAACTCACCAGCGAGCACACGACGAGAGTAGATGTTTGATGTGTATG 117557 Query 212968 GCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA 213027 |||||| || ||||||||| || || ||||| | |||| ||| |||||||| || || | Sbjct 117558 GCTCGAAGCACTCGTTGTTGCCGAGGATCTGGGAAGTGGAGGCAGTGGGCATAGGTGCAA 117617 Query 213028 CCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCC 213087 | || ||| ||| | || || |||| |||| | || || || || || Sbjct 117618 CGAGCAGAGAGTTGCGGACACCATGCTGTGCGAT-CTTCTCC----TTCAGCGAAGCCCA 117672 Query 213088 ATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGC 213147 ||| |||| ||||| | || |||||||||| |||| || || | || Sbjct 117673 ATC--CCAG--AGGTCGGTAGGAGTGACACCCCACATGTCATACTG-GAGCTGACCCTGA 117727 Query 213148 TCACGGGGC-TGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 | |||| ||| | ||| | || ||| |||||| |||||||||| | |||||||| Sbjct 117728 GAAATGGGCGAGCCTTCGTACGTGGTGTAAGGGCCAAGCTCCTTGGCGATGTCGCAGGAA 117787 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 | || |||||||| ||||||||| || || |||| ||||||||||||||||||| Sbjct 117788 GAGGTCAAGGCAGCGTGGTAGATGGTCTCGAAGATCTGGGTGTTGAGCTTCTTGGCCTCG 117847 Query 213267 GGGGACGTGAAGGGCATCATCATGCG-TTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 || ||| ||| |||| | | | | |||| |||| || || || || || || | Sbjct 117848 GGAGACTCGAAAGGCA-AACGAAGAGCAAGGAAAGCATCGGCAAGACCTTGTACACCCAG 117906 Query 213326 GCCGATGGGTCTGTGTCTCAGGTT-AGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGC 213384 ||||| || ||||| | | ||| || | || |||||| | ||||| ||| Sbjct 117907 ACCGATAGGCCTGTGACGGAAGTTGCTACGGCGTGC-CTCCTCGACAGGGTAGTGATTGA 117965 Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444 || ||||||||||||||||||||||| || | ||| | | || | || | Sbjct 117966 CCTCAATGATCTTGTTGAGGTTGCGGGTACAGACCTGCACGACCTCGTGGAGCTTCTTGA 118025 Query 213445 GATTGAACACGTAGCCCCC--GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTT 213502 | |||||| | ||| | || | |||||| ||||| || | | |||| ||| Sbjct 118026 AGTCGAACAC--ACCCCGCTTGTAGTCAACAAACGATGGCAGAGCAACGGAAGCCAAGTT 118083 Query 213503 GCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCA 213562 ||||||||| ||||| | | ||||||| || |||||||| |||||||||||| || Sbjct 118084 GCAAACGGCAACCTCATCTGGCGCTGTGTATTCGATGATCTCAGTGCACAGGTTGGAGCT 118143 Query 213563 TCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCAT 213622 || ||||| || ||||||| ||||| ||| |||||| | ||||||||| ||||| Sbjct 118144 GCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCGGCATCCTTGTAAAGCAT 118203 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCC 213680 | ||||| || ||||| ||| | | | || | |||| |||||| | ||| Sbjct 118204 GAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGA--TGGCATACCAGAGCTTTTGGGCA 118261 Query 213681 TTGAC---CACCCG--CCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGT 213735 ||| | | || ||| | ||| ||| |||| ||||| || | Sbjct 118262 CGGACGGTCTCGCGACCCTTA-TTCTC-------TCTCTCATACTTCTCGTACAGGGCAA 118313 Query 213736 TGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCC 213795 ||| |||| ||| |||| | || || || || ||| ||||| || ||| Sbjct 118314 CGAACTCGTCGCCGTAGACGTCAGCAAGACCTGGGCACTCGTTGGGGCACATAAGCGTCC 118373 Query 213796 AGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855 | || || | || ||| | ||||||||| || || |||| |||||| || ||||| Sbjct 118374 ACTCGCCATTCTCCTGGACACGCTGCATGAAAAGATCGGGGATCCACAGGGCATAGAACA 118433 Query 213856 GGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGA 213915 ||| | | | ||| ||| || ||| || | || || || ||| | |||| Sbjct 118434 AGTCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTCCTCAAGTCGAGGAAGCCGAAGA 118493 Query 213916 TGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCT 213972 ||| |||||||| ||||| | ||||||||| || || || | || | ||||| |||| Sbjct 118494 CGTCAGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGGGCGCTTGTTGCCACCCT 118553 Query 213973 GGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACT 214032 |||| || | ||| ||||| ||| || || | || | || ||||| || Sbjct 118554 GGTCGACGTAGCGGGCGGTGTTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGATG 118613 Query 214033 GTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCCC 214090 ||| |||||||| | ||||| ||||| | ||| | | | ||| ||| |||| || Sbjct 118614 TTCCATTGGTTCCTCCGATATAGGAGCCAGTGGCACGAATGCGGTGCACATTGAGA--CC 118671 Query 214091 TATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGC 214150 || || || || ||||||||||| || || | ||| || || ||| ||| | Sbjct 118672 AATACCGCCAGCAGTCTTGGAGATCAACGCACAAGTCTTCAATGTGTCGTAGATACCGTC 118731 Query 214151 CATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTG-GGGCCTGGACGAGC 214209 |||||||| || | | || | | |||||| || | || ||| ||| | || Sbjct 118732 AATGCTGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGGGGATGG-TGTGC 118790 Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGA-GGAGCCTGTAG 214268 | | |||||| ||||| || || || | | |||| | || | | || | ||| Sbjct 118791 CCGCGTTGAAGAGCGTCGGCGACGCGTGTGTGAAGTACTTTTGCGACATGTAGTC-GTAT 118849 Query 214269 GTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATG 214328 ||||| | | | ||||| | | ||||||| | |||| | ||| |||||| Sbjct 118850 GTCTCGATGGCCTTCTCAATGTCCTCCATGTGGATACCAACAGCGACGCGCATGAGCATG 118909 Query 214329 TGCTG-GGGCCT--CTCTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGA 214385 ||||| |||| | | | ||| ||| || ||| || || ||||||||||| Sbjct 118910 TGCTGTGGGCGTTCGGCAACTTTTCCGTTGATGC---GGAGGAGATATGAGCGCTCCAGT 118966 Query 214386 GTCTTGAACCCAAAGTAGGAGTAGGTATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGC 214445 |||||||| || ||| | |||| || || ||| | || ||| || ||| Sbjct 118967 GTCTTGAAGCCGAAGAACTGGTAGTTAAAGTCACGGTCGTAGACGATGGCGCTGTTGAGC 119026 Query 214446 TCTTCCGCGTGCTCTTGGCTCAGCTTG-AAAATCTCGTCCGAGATCAAGGG 214495 || || || || || ||| | | |||| | | ||| ||||||||||| ||| Sbjct 119027 TCATCGGCATGGTCCTGGATGATCTTGTAGACTCT-GTCCGAGATCATGGG 119076 >seq50 Length=575836 Score = 156 bits (172), Expect = 8e-33 Identities = 349/520 (67%), Gaps = 17/520 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 303181 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATGTTCTC 303240 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| ||||||||||| | ||| || | | ||| | | |||| || Sbjct 303241 CATGAAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTGGGGTTGCCAA---GAGCCAGGAG 303297 Query 47959 GTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015 || || |||||| |||||||||| | ||||||| || |||||| || | || Sbjct 303298 CAGACGGTCGGCGACGAACTCGATGTACTGGCACATGAGAGTAGCGTTCATACCGAGTAG 303357 Query 48016 GGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 | ||| | ||| | | || ||||||| ||| |||| ||||| || | || Sbjct 303358 TGCGCAGGGGAGAGCATCGGACAGGAACTCCTGCTCAATCTCGACGGCCTCGGTGATGAT 303417 Query 48076 ---CTGCTTAACG-CGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131 |||| | | | || || |||| |||| |||| | | | || | Sbjct 303418 GGCCTGCACAGCATCTTTGCTTGGACGGTT-GTTGAGCAGA------GAGAACAACAGAC 303470 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | |||||||| |||||| ||| ||||| || |||||| | || || ||| |||| Sbjct 303471 AAGCAAAGTCTGTGTGCATGCCCTCGTCACGAGAAATGAGCTCATTAGAAAAGGTAAGAC 303530 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | ||||| | || | || || |||||||| || | |||||| || ||| |||||||| Sbjct 303531 CGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGACGCGAACGATCCACTGAAGAAGA 303590 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 ||||||| || || || || || ||| | | |||| | || ||||||||| |||| Sbjct 303591 TGCCCTCGACGGCGGCAAAGGCAACGAGACGGTTGGCGAAGGTAGAGTTCTTGTCCGAGA 303650 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||| || |||||||| |||||||| |||||| || Sbjct 303651 TCCATCGTAGGGCCCAGTCGGCCTTCTTGCGGATGCAGGG 303690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528864273920