Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq53 102 5e-16 >seq53 Length=112647 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||||||||| | || || ||| ||| || | || || || | ||| || Sbjct 69902 ACGGAGACGGAGTACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGCGT 69961 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||| || ||||| ||||| || || ||||| || || ||||| || || || Sbjct 69962 ACGGCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCC 70021 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||| |||||||| |||||| ||||| ||||| | | | || |||| Sbjct 70022 CTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTATCCGACGACTCAA-CCTCAA 70080 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| || || || || || ||||| ||||| ||||| Sbjct 70081 GGGTAATGGTCTTGCCTGTCAGGGTCTTGACGAAGATTTG 70120 Score = 95.1 bits (104), Expect = 8e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || || ||||| |||||||| || ||||| || || ||||| || || || ||||| Sbjct 69740 ATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTT 69799 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAAGGGTAA 480735 ||| |||||||| |||||| ||||| ||||| | | | || | ||||||||| Sbjct 69800 GTCCTGAATCTTGGACTTGACATTGTCAATGGTATCCGACGACTCAACCT-CAAGGGTAA 69858 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || ||||| ||||| ||||| Sbjct 69859 TGGTCTTGCCTGTCAGGGTCTTGACGAAGATTTG 69892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268164701540024