Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq63 298 7e-76 seq53 181 1e-40 seq100 129 8e-25 seq108 111 2e-19 seq170 107 3e-18 seq72 105 9e-18 seq249 84.2 3e-11 >seq63 Length=31160 Score = 298 bits (330), Expect = 7e-76 Identities = 490/703 (70%), Gaps = 10/703 (1%) Strand=Plus/Minus Query 195287 ATAATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGG 195346 || |||||| ||||| ||||| ||| | ||||| || ||||| || |||||| | | Sbjct 14978 ATCATGTCT---GCTATCGGTATTGATCTCGGAACCACGTACTCTTGCGTTGGTATCTTC 14922 Query 195347 CAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTAC 195406 | |||| || | || || || | |||||||| || ||||| || ||||| |||| | Sbjct 14921 CGCGATGACCGCATCGAAATCATTGCCAATGACCAGGGTAACCGAACTACTCCCTCGTTC 14862 Query 195407 GTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATG 195466 || || || || || | ||| || ||| |||| || |||| || || ||| || ||| Sbjct 14861 GTCGCATTCACGGACACTGAGCGCCTCATTGGTGACTCCGCGAAGAACCAGGTCGCCATG 14802 Query 195467 AACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAG 195526 ||||||||||| || ||||||||||| |||||| | || || || ||||| | || Sbjct 14801 AACCCTATCAACACAGTCTTTGACGCTAAGCGTTTGATCGGACGTAAGTTCGCCGACGCT 14742 Query 195527 AAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGATA 195584 | ||||| | ||| || ||| ||| ||| | ||| | || | | | ||| | Sbjct 14741 GAGGTCCAGGCCGACATGAAGCACTTCCCTT-TCAAGGTCATCGACAAGGGCGGC----A 14687 Query 195585 AGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTT 195644 |||| | ||| | || || || | || ||| |||| || | |||||||| || | Sbjct 14686 AGCCCGTCATTCAGGTCGAGTTCAAGGGCGAGGAGAAGACCTTCACACCCGAAGAGATCT 14627 Query 195645 CGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGA 195704 |||| ||||| | | ||||||| ||||||||| || || | | | ||| || || | Sbjct 14626 CGTCCATGGTTCTTGTCAAGATGAGGGAGACTGCTGAGTCCTACCTCGGTGGTACCGTCA 14567 Query 195705 AAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGG 195764 | | || || || || || ||||| ||||||| || || ||||| ||||| || |||| Sbjct 14566 ACAACGCCGTCGTCACAGTCCCTGCCTACTTCAACGACTCGCAACGTCAGGCTACTAAGG 14507 Query 195765 ACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTG 195824 | |||| | ||||| || || ||| || | || ||||| || || || || |||| Sbjct 14506 ATGCTGGTCTCATTGCTGGCCTTAACGTCCTCCGTATCATCAACGAGCCTACCGCCGCTG 14447 Query 195825 CAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATC 195884 | ||||| || ||||| ||||||| | || | || || || | ||||| ||| Sbjct 14446 CCATTGCCTACGGTCTCGACAAGAGGACTGAGGGCGAGCGTAACGTCCTCATCTTCGATT 14387 Query 195885 TCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAA 195944 | ||||||||||| || |||||||| || | | ||||| | ||||| ||||| || | Sbjct 14386 TGGGTGGTGGTACATTCGATGTCTCCCTCTTGACCATTGAGGAGGGTATCTTCGAGGTCA 14327 Query 195945 AGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || | |||||||| || ||||| | |||||||| || ||||| Sbjct 14326 AGTCGACTGCTGGAGACACTCACTTGGGTGGTGAGGACTTCGA 14284 >seq53 Length=112647 Score = 181 bits (200), Expect = 1e-40 Identities = 180/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || ||||| || || || || || ||||| |||||||||| Sbjct 70128 GTGGTATGCAAATCTTCGTCAAGACCCTGACAGGCAAGACCATTACCCTTGAGGTTGAGT 70069 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||| || || || || || |||| |||||||||| || ||||| ||||| ||||| | Sbjct 70068 CGTCGGATACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCACCTG 70009 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || || |||||||| ||||| ||||| || ||||| || | || | Sbjct 70008 ACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGACGGCCGTACGCTATCAGACT 69949 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || ||||| |||||||| ||| | || || | || || |||||| Sbjct 69948 ACAACATCCAGAAGGAATCTACTCTCCACTTGGTACTCCGTCTCCGTGGTGGT 69896 Score = 170 bits (188), Expect = 3e-37 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || ||||| || || || || || ||||| |||||||||| Sbjct 69900 GTGGTATGCAAATCTTCGTCAAGACCCTGACAGGCAAGACCATTACCCTTGAGGTTGAGT 69841 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||| || || || || || |||| |||||||||| || ||||| ||||| ||||| | Sbjct 69840 CGTCGGATACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCACCTG 69781 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || ||||||||||| ||||| || ||||| || || ||| | || | Sbjct 69780 ACCAGCAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACACTCTCGGACT 69721 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 |||| | || |||||||| || || ||| | || || Sbjct 69720 ACAATATCCAGAAGGAGTCGACGCTGCACTTGGTGCT 69684 Score = 170 bits (188), Expect = 3e-37 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||||||||| ||||| || ||||| ||||| ||| |||| | Sbjct 70611 ACCGGCAAGACGATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAACGTCAAGAGC 70552 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 |||||||| || |||||||||||||| ||||| ||||| || || || ||||| || || Sbjct 70551 AAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTTGCCGGCAAG 70492 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| ||||| |||||||| | || ||||| | || |||||||| || || ||| Sbjct 70491 CAGCTTGAGGATGGTCGTACCCTTTCGGACTACAATATCCAGAAGGAGTCCACCCTCCAC 70432 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 70431 CTCGTCCTCCGCCTACGTGGTGGT 70408 Score = 147 bits (162), Expect = 3e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || ||||| ||||| || ||||| || || || ||||| ||| |||| | Sbjct 70327 ACCGGCAAGACCATCACTCTCGAAGTCGAGTCATCCGATACCATCGACAACGTCAAGAGC 70268 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| ||||| ||||| || || || || |||||||| || | || || ||||| || Sbjct 70267 AAGATCCAAGACAAGGAGGGTATCCCTCCTGATCAGCAGCGCTTGATCTTCGCTGGCAAG 70208 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| |||||||| || ||| | | || |||||| | || |||||||| || |||||| Sbjct 70207 CAGCTCGAAGATGGCCGCACCTTGTCCGACTACAACATCCAGAAGGAGTCCACACTACAC 70148 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| ||| | || || |||||| Sbjct 70147 CTTGTCCTACGCCTGCGTGGTGGT 70124 >seq100 Length=90903 Score = 129 bits (142), Expect = 8e-25 Identities = 224/326 (69%), Gaps = 6/326 (2%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||||||| || || | |||||| || | || || | || || || ||| Sbjct 41371 AAGATGAAGGAGACTGCCGAGTCCTACATGGGCAAGAACGTCAAGAACGCCGTCGTTACT 41312 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || ||||| || |||||||| | | || || Sbjct 41311 GTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGACGCCGGTCAGATCGCT 41252 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| ||| | | |||| || || || || || || ||||||| |||||| Sbjct 41251 GGTCTCAACGTTCTCCGTGTCGTCAACGAGCCTACCGCTGCCGCCCTTGCTTACGGTCTG 41192 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 |||||| || ||| | | || ||| ||||| ||||||||||| || Sbjct 41191 GACAAGGCCACTGACAACGTC------GTCGCCGTCTACGATCTTGGTGGTGGTACCTTC 41138 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||| |||| | ||| | || | ||| | ||||| || ||| | || ||||| Sbjct 41137 GATATCTCCATCCTCGAGATCCAGAACGGTGTCTTCGAGGTCAAGTCGACCAACGGTGAC 41078 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| |||||||| || ||||| Sbjct 41077 ACCCATCTCGGTGGTGAGGACTTCGA 41052 >seq108 Length=158744 Score = 111 bits (122), Expect = 2e-19 Identities = 172/245 (70%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||||| || || || ||||| || |||||||| | ||| ||| Sbjct 119827 ACCGTCCCCGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGACGCCGGTGCCATT 119886 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || ||||| ||| ||| | || ||||| || || || || || || || ||||| ||| Sbjct 119887 GCTGGTCTCAACGTTCTCCGTATCATCAACGAGCCTACCGCTGCCGCTATCGCTTACGGT 119946 Query 195839 CTGGACAAGAACAAGGACGAA---GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | ||| ||| || | || || | |||| ||||||||||||||| Sbjct 119947 CTCGGCTCCGGAAAGTCCGAGAAGGAGAGGAACGTCCTCATCTACGATCTCGGTGGTGGT 120006 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| ||||| | || | |||||| | ||| || |||||||||||| Sbjct 120007 ACTTTCGATGTCTCCCTTCTGCACATCCAGGGTGGTGTCTTCACCGTTAAGGCTACTGCT 120066 Query 195956 GGTGA 195960 || || Sbjct 120067 GGAGA 120071 >seq170 Length=170908 Score = 107 bits (118), Expect = 3e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 171938 TCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTG 171997 |||| ||||||| || || |||||||||||||| || || ||||| || | || || | Sbjct 129821 TCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAGCAGCGCTTGATCTTCG 129762 Query 171998 CTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTA 172057 | || || |||||||| || || || ||||| | || |||||| | || |||||||| | Sbjct 129761 CCGGCAAGCAGCTTGAGGACGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGA 129702 Query 172058 CTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| ||||| || || | || || |||||| Sbjct 129701 CTCTCCACCTGGTCCTTCGTCTCCGTGGTGGT 129670 >seq72 Length=147729 Score = 105 bits (116), Expect = 9e-18 Identities = 273/404 (68%), Gaps = 19/404 (5%) Strand=Plus/Plus Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608 || || || |||||| | || | ||| |||| ||||| ||||| || || || || Sbjct 126682 ATTCCTCGCGGTGCTGTCCTGTCTGGTCCCCCCGGTACCGGTAAGACGCTGCTTGCCAAG 126741 Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGG---CGAGTTTCATC 198665 |||| || || || || |||| ||||| |||||||| || |||| |||||| | || Sbjct 126742 GCTACGGCTGGCGAGTCTGGTGTGCCCTT-CTTCAGTG-TCAGCGGTTCCGAGTT-CGTC 126798 Query 198666 GAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAA 198725 |||||||| || ||||| |||||| ||| || || || | || | | || || || Sbjct 126799 GAGATGTTTGTAGGTGTCGGTGCTTCGCGAGTACGCGACTTGTTCGCCAATGCGCGC-AA 126857 Query 198726 AATCA-ACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGGTGG 198784 | || ||| || |||||||||||||| ||||| || || ||||| | || | | | Sbjct 126858 GAGCACACCCTGCATCATCTTCATTGACGAGATCGATGCCATTGGT--CGATCGCGTTCG 126915 Query 198785 AACTACTACACC-----TGGTAATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACT 198839 || | || | ||| || || |||||||| || | |||||| | | || Sbjct 126916 AAGCAGAACTTCGGTGGTGGCAACGACGAGCGTGAAGCCACACTGAACCAGATCTTGACA 126975 Query 198840 GAGATGGATGGTTTTGACA-ATGAGA-CTGGTATCGTGGTGATTGCTGCTACAAATAGGA 198897 || ||||| || ||| ||| | || | || |||| || |||||| ||| ||| | Sbjct 126976 GAAATGGACGGCTTTAACACAACCGAGCAGG--TCGTCGTTCTTGCTGGTACTAATCGAC 127033 Query 198898 TTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGAC 198941 |||| | || ||| | || || | ||||| || || |||||| Sbjct 127034 CTGATGTTCTCGATCAGGCGCTCATGCGTCCTGGCCGTTTCGAC 127077 >seq249 Length=183263 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 79246 TCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTG 79305 ||| ||||| ||||| ||||||||||| || || | ||||||||||| || || ||||| Sbjct 117625 TCTGCTCGTTGCACCTATGCCCACTGCCTCCACTTCCCAGATCCTCGGCAACAACGAGTG 117566 Query 79306 TTTTGAACCATACACTACAAACATATATCTTCGTCGCACATTAGCTGGTGAATT 79359 || || |||||||| ||||||| || |||||| | |||||||| || Sbjct 117565 CTTCGAGCCATACACATCAAACATCTACTCTCGTCGTGTGCTCGCTGGTGAGTT 117512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657859620531360