Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq53 86.0 1e-11 >seq53 Length=112647 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | || || || || || || | ||| | ||| || || || Sbjct 70116 ATTTGCATACCACCACGCAGGCGTAGGACAAGGTGTAGTGTGGACTCCTTCTGGATGTTG 70175 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||| || || | ||| || | || || || || || || || | ||| ||| Sbjct 70176 TAGTCGGACAAGGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGA 70235 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || || || || ||||| || ||| | || | || || |||||||| Sbjct 70236 TCAGGAGGGATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGAT 70295 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGT 193336 ||||| ||||| ||||| || || || || || Sbjct 70296 GACTCGACTTCGAGAGTGATGGTCTTGCCGGT 70327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899650598960160