Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq53 100 3e-16 >seq53 Length=112647 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || || || |||||||| || | |||| || | || | || || Sbjct 70327 ACCGGCAAGACCATCACTCTCGAAGTCGAGTCATCCGATACCATCGACAACGTCAAGAGC 70268 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| || || || ||||| ||||| || || |||||||| || || || Sbjct 70267 AAGATCCAAGACAAGGAGGGTATCCCTCCTGATCAGCAGCGCTTGATCTTCGCTGGCAAG 70208 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| || ||| | | | |||| || || ||||| || ||||| || ||||||||| Sbjct 70207 CAGCTCGAAGATGGCCGCACCTTGTCCGACTACAACATCCAGAAGGAGTCCACACTACAC 70148 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 | || | || |||| || || Sbjct 70147 CTTGTCCTACGCCTGCGTGGTGG 70125 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || ||||| || || || || | | Sbjct 69895 ATGCAAATCTTCGTCAAGACCCTGACAGGCAAGACCATTACCCTTGAGGTTGAGTCGTCG 69836 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || || || || || || || Sbjct 69835 GATACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCACCTGACCAG 69776 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || ||| | |||||||| || || |||||||||||| ||| | || | || || || | Sbjct 69775 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGTCG-CACAC-TCTCGGACTACA 69718 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 | || || ||||| ||||| || ||||||||| | || |||| || ||| Sbjct 69717 ATATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGTCTGCGTGGCGGC 69668 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || || || ||||| || || | ||||||| | || | || || Sbjct 70611 ACCGGCAAGACGATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAACGTCAAGAGC 70552 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| ||||| || |||||||| || || || ||||||||||||| || Sbjct 70551 AAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTTGCCGGCAAG 70492 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| |||||| | | | | || || || || || || ||||| || || || ||| Sbjct 70491 CAGCTTGAGGATGGTCGTACCCTTTCGGACTACAATATCCAGAAGGAGTCCACCCTCCAC 70432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895699182640