Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq180 111 1e-19 >seq180 Length=147405 Score = 111 bits (122), Expect = 1e-19 Identities = 229/339 (68%), Gaps = 4/339 (1%) Strand=Plus/Minus Query 34313 TGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCAT 34372 ||| ||| || || ||||| | || | | || | || |||||| |||||| |||| Sbjct 104637 TGACCTCGGTTTCAGGGTTCTTGCACTTCTTGCAGAGAACGAACTTGGTGATGAAGCCAT 104578 Query 34373 CAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTT 34432 | || ||| || | ||| | |||||| | ||| |||| ||| | || || | | Sbjct 104577 CGAGGTAGTCTTGGAGCTTGCTAGCGTCGTGAGCGCCATTGATGATCCAGCGGTCATCAT 104518 Query 34433 TGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTT--TGTCGGGTAAAT 34490 || | | | || || ||||| |||||| | || ||||| || || || | || Sbjct 104517 TGGGGTTGGTATTGGTCTGAGCGCCAAGCTCGAAACCAAAGTATTTGATGACGTGAGAAG 104458 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 | || || |||| | ||||| | || || |||||| ||||| ||||||||||| Sbjct 104457 GA--GGGCGGGCAAGAGAGTTGGCAACGCTGGTCAGGTTGACAATGACGGTCTTGATGCC 104400 Query 34551 GTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC 34610 ||||||||| ||||| | ||||| |||||| ||| |||||||||||||| | ||| Sbjct 104399 GTTGCCCTTGCCTTCAATCTTGGACTGTATGCGCTCCATCTTGTAGCGGTAGAAGGGGTC 104340 Query 34611 CGCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGC 34649 | | || |||| || ||| || || |||| || || Sbjct 104339 GGTGATATCGCGGCGAATGTTGACGGTAGCCATGGTTGC 104301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839899350634