Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq53 104 2e-17 seq136 95.1 8e-15 seq170 89.7 3e-13 >seq53 Length=112647 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || |||||||| || |||| |||| ||||| ||||| || || || Sbjct 69704 CTCCTTCTGGATATTGTAGTCCGAGAGTGTGCGACCATCCTCCAGCTGCTTACCAGCAAA 69763 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || |||||||| | || | ||||||||||| | || || ||||| Sbjct 69764 GATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATT 69823 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || |||| ||| |||||||| || || |||||||| || Sbjct 69824 GTCAATGGTATCCGACGACTCAACCTCAAGGGTAATGGTCTTGCCTGTCAGGGTCTTGAC 69883 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 69884 GAAGATTTGCAT 69895 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| ||||| ||||| | || | || ||||| ||||| || |||||| Sbjct 69933 TCCTTCTGGATGTTGTAGTCTGATAGCGTACGGCCGTCTTCCAGCTGCTTACCAGCGAAG 69992 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || || |||||||| | || | ||||||||||| | || || ||||| Sbjct 69993 ATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTG 70052 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | ||| || |||| ||| |||||||| || || |||||||| || Sbjct 70053 TCAATGGTATCCGACGACTCAACCTCAAGGGTAATGGTCTTGCCTGTCAGGGTCTTGACG 70112 Query 34967 AAGATCTGCAT 34977 ||||| ||||| Sbjct 70113 AAGATTTGCAT 70123 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 10/193 (5%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| || | | |||| |||| Sbjct 70140 AGGACAAGGTGTAGTGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCT 70199 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| || ||||| || | || | ||||||||||| Sbjct 70200 TCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATACCCTCCTTGTCT 70259 Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | || || |||||| |||| ||||| | | |||||| || | || | Sbjct 70260 TGGATCTTGCTCTTGACGTTGTCGATGGTATCGGAT-----GACTCGACTTCGAGAGTGA 70314 Query 34941 TGGTCTTTCCCGT 34953 ||||||| || || Sbjct 70315 TGGTCTTGCCGGT 70327 >seq136 Length=202766 Score = 95.1 bits (104), Expect = 8e-15 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | || ||||||||| ||||| ||||| || || |||| |||| Sbjct 67018 CAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATC 66959 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||||||||| || |||||||| | || | ||||||||||| Sbjct 66958 CTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 66899 >seq170 Length=170908 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | || ||||||||| ||||| ||||| || ||| |||| | || Sbjct 129686 AGGACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCC 129745 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||||| || |||||||| | || | || |||||||| Sbjct 129746 TCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTC 129804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691458349222