Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq53 129 1e-24 >seq53 Length=112647 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||| ||||||||||| ||||| || || || || | Sbjct 69895 TACCACCACGGAGACGGAGTACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTG 69954 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 |||| | | |||||||| || || || ||||| ||||| || | || || || || | Sbjct 69955 ATAGCGTACGGCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTG 70014 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || |||||||| | || ||||| ||||| ||||| | || | Sbjct 70015 GGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTATCCGACGACTCAA 70074 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || ||||||||||||| ||||| || || || ||||| Sbjct 70075 CCTCAAGGGTAATGGTCTTGCCTGTCAGGGTCTTGACGAAGATTTGCAT 70123 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || |||||||| || || || ||||| ||||| || || || Sbjct 69669 CCGCCACGCAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAGTCCGAG 69728 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| || || || || || ||||||||||| || | || || || || || Sbjct 69729 AGTGTGCGACCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGTGGG 69788 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || |||||||| | || ||||| ||||| ||||| | || || Sbjct 69789 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTATCCGACGACTCAACC 69848 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||||||||||| ||||| || || || ||||| Sbjct 69849 TCAAGGGTAATGGTCTTGCCTGTCAGGGTCTTGACGAAGATTTGCAT 69895 Score = 87.8 bits (96), Expect = 4e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || || || ||||| ||||| || || || || | | ||| Sbjct 70421 CGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAAAGGGTACGACCA 70480 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || || |||||||| || | || || || ||||| || |||||||| Sbjct 70481 TCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTG 70540 Query 82716 TCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || |||||||| ||| || || || || || || || || || || || | || || Sbjct 70541 TCCTGAATCTT-GCTCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 70599 Query 82775 CGTCTTGCCTGT 82786 ||||||||| || Sbjct 70600 CGTCTTGCCGGT 70611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981822948074582