Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq249 165 8e-36 >seq249 Length=183263 Score = 165 bits (182), Expect = 8e-36 Identities = 462/704 (66%), Gaps = 9/704 (1%) Strand=Plus/Plus Query 147709 AACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCAC 147768 ||||||||||||||| || ||||| || || |||| | || ||||| |||| |||| Sbjct 118316 AACTCGTCGCCGTAGACGTCAGCAAGACCTGGGCACTCGTTGGGGCACATAAGCGTCCAC 118375 Query 147769 ATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGA 147828 | | | | | | || || |||| || ||||| || | |||||| || || | | Sbjct 118376 TCGCCATTCTCCTGGACACGCTGCATGAAAAGATCGGGGATCCACAGGGCATAGAACAAG 118435 Query 147829 TCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATG 147888 ||||| || ||||| ||| ||| |||| | || | || ||| | Sbjct 118436 TCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTCCTCAAGTCGAGGAAGCCGAAGACG 118495 Query 147889 TCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGG 147945 || |||||||| || || | ||||| ||| | |||||| ||||| || |||||| Sbjct 118496 TCAGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGGGCGCTTGTTGCCACCCTGG 118555 Query 147946 TCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTG 148005 ||||| | ||| | ||||||| | || || | ||| || || ||| ||| || Sbjct 118556 TCGACGTAGCGGGCGGTGTTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGATGTT 118615 Query 148006 CCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATG 148065 || ||||| ||| | | ||| ||| || | |||||| || | ||||| Sbjct 118616 CCATTGGTTCCTCCGATATAGGAGCCAGTGGCACGAATGCGGTGCACATTGAGACCAATA 118675 Query 148066 CCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCG 148122 ||||| || || ||| || || || |||| | | |||||| |||||| ||||| Sbjct 118676 CCGCCAGCAGT-CTTGGAGAT--CAACGCACAAGTCTTCAATGTGTCGTAGATACCGTCA 118732 Query 148123 ATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCC 148182 |||||||| | || | | | | | || || || ||||||| || | || ||| Sbjct 118733 ATGCTGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGGGGATGGTGTGCCC 118792 Query 148183 GCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTC 148242 || ||| || || || |||||| || || | ||||| ||| | || ||| Sbjct 118793 GCGTTGAAGAGCGTCGGCGACGCGTGTGTGAAGTACTTTTGCGACATGTAGTCGTATGTC 118852 Query 148243 TCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGC 148302 || || || | || ||||| || ||| || || | ||||||||||||||||||||| Sbjct 118853 TCGATGGCCTTCTCAATGTCCTCCATGTGGATACCAACAGCGACGCGCATGAGCATGTGC 118912 Query 148303 TGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTG 148362 ||||| ||||||||||||| |||||| ||| |||||| || || || ||| Sbjct 118913 TGTGGGCGTTCGGCAACTTTTCCGTTGATGCGGAGGAGATATGAGCGCTCCAGTGTCTTG 118972 Query 148363 TAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 | || ||| ||| ||| | ||| || | ||||| ||||||| Sbjct 118973 AAGCCGAAGAACTGGTAGTTAAAGTCACGGTCGTAGACGATGGC 119016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609186317680