Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq170 91.5 1e-13 seq53 86.0 6e-12 seq136 84.2 2e-11 >seq170 Length=170908 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || |||| || |||||||| || || || Sbjct 129706 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAA 129765 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 ||||| ||||||||||||| |||| || ||||||||| |||||| Sbjct 129766 GATCAAGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTT 129813 >seq53 Length=112647 Score = 86.0 bits (94), Expect = 6e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || | | ||| || | || || |||||||| || ||||| Sbjct 70444 CTCCTTCTGGATATTGTAGTCCGAAAGGGTACGACCATCCTCAAGCTGCTTGCCGGCAAA 70503 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | ||||| || ||||||||| ||||| ||| | || Sbjct 70504 GATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTTGCTCTTGA-CGT 70562 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 || | | |||||| || |||||||| | |||||||| || || || Sbjct 70563 TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTGCCGGT 70611 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| || || ||||| || | | || || | || || Sbjct 69686 CACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAGTCCGAGAGTGTGCGACCATCCTC 69745 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||||||| ||||| || | ||||||||||| | || | || |||||||||| Sbjct 69746 CAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTG 69805 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||| | | | | | || || ||| || ||||| | || || || || Sbjct 69806 AATCTTGGACTTGACATTGTCAATGGTATCCGACGACTCAACCTCAAGGGTAATGGTCTT 69865 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || || || || || ||||| Sbjct 69866 GCCTGTCAGGGTCTTGACGAAGATTTGCAT 69895 >seq136 Length=202766 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| || | ||| |||||| || |||||||| |||| Sbjct 67032 CCACCACGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 66973 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || |||| ||||||||||||| ||| Sbjct 66972 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGA 66913 Query 35630 ACGCTCTCCTTGTC 35643 | || ||||||||| Sbjct 66912 ATGCCCTCCTTGTC 66899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791695397040