Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq249 122 1e-22 seq50 93.3 6e-14 >seq249 Length=183263 Score = 122 bits (134), Expect = 1e-22 Identities = 510/789 (65%), Gaps = 26/789 (3%) Strand=Plus/Plus Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 || || || || || | ||| || ||||| |||| ||| ||||||||||| || || Sbjct 118148 ATGGTACCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCGGCATCCTTGTAAAGCATGAAG 118207 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTA---GCATTT 69468 || | ||||| || |||||| |||| || | | ||| || | | ||| Sbjct 118208 GGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCA---GAGCTTTTGGGCACGG 118264 Query 69469 ATTACGGTCTTGTAACGCTT---CTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATT 69523 | |||||| | || ||| |||| | ||||| || | ||| | || |||| | Sbjct 118265 A---CGGTCTCGCGACCCTTATTCTCTCTCTCATACTTCTCGTACAGGGCAA--CGAACT 118319 Query 69524 CATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACAT 69583 | || || | || ||| | | || || || || || || ||||| | | |||| | Sbjct 118320 CGTCGCCGTAGACGTCAGCAAGACCTGGGCACTCGTTGGGGCACATAAGCGTCCACTCGC 118379 Query 69584 CATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCT 69642 ||| |||| || || | ||| || |||||||| ||||| || || ||| || | || Sbjct 118380 CATTCTCCTGGACACGCTGCATGAAAAGATCGGGGATCCACAGGGC-ATAGAACAAGTCG 118438 Query 69643 CTGGTTCTATTTTCTTCATTTCC-TGTAttttttttAAGATCGAGAAACTCCATAATATC 69701 | | | | || || || || || | || | ||| ||||| || | | | || Sbjct 118439 CGAGCACGAACCTCCTCCTTGCCGTGGTTCTTCCTCAAG-TCGAGGAAGCCGAAGACGTC 118497 Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761 || |||||||| || || || || || | | || || || || || || ||||| || Sbjct 118498 AGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGGGCGCTTGTTGCCACCCTGGTC 118557 Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821 | ||| | ||| ||||| || ||||| | ||||| || || | ||| || ||| | || Sbjct 118558 GACGTAGCGGGCGGTGTTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGATGTTCC 118617 Query 69822 ATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATAT--TACTAATAGATAGACCTATT 69879 ||| ||||| ||||| || | || ||||| | | || || |||| || Sbjct 118618 ATTGGTTCCTCCGATATAGGAGCCAGTGGCACGAATGCGGTGCACATTGA--GACCAATA 118675 Query 69880 CCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATG 69939 || || || | || ||||| | |||||| ||||||||||| || ||||| || ||| Sbjct 118676 CCGCCAGCAGTCTTGGAGATCAACGCACAAGTCTTCAATGTGTCGTAGATACCGTCAATG 118735 Query 69940 CTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCA 69999 || || || |||||| | || || || |||||||| | | || ||||| Sbjct 118736 CTGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGGGGATGGTGTGCCCGCG 118795 Query 70000 TTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGATTGTATGTTTC 70058 || || | || || || ||||| ||||| | |||| || | | || | |||||| || Sbjct 118796 TTGAAGAGCGTCGGCGACGCGTGTGTGAAGTACTTTTGCGACATGTAG-TCGTATGTCTC 118854 Query 70059 AATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118 || || || || ||| | || || || | ||||| ||||| | ||| ||||| Sbjct 118855 GATGGCCTTCTCAATGTCCTCCATGTGGATACCAACAGCGACGCGCATGAGCATGTGCTG 118914 Query 70119 AGGTCGTTC 70127 || ||||| Sbjct 118915 TGGGCGTTC 118923 >seq50 Length=575836 Score = 93.3 bits (102), Expect = 6e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 39637 GCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTT 39696 |||||| || | | ||| | || |||||||| || || || ||||| ||||||||||| Sbjct 303490 GCCCTCGTCACGAGAAATGAGCTCATTAGAAAAGGTAAGACCGGGCATCAGACCACGCTT 303549 Query 39697 TTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAA 39756 || ||||| || |||| || || |||||| ||||||||||| || || || ||||| Sbjct 303550 CTTCAGCCAGAAGATGGACGCGAACGATCCACTGAAGAAGATGCCCTCGACGGCGGCAAA 303609 Query 39757 TGCAACAAG 39765 ||||| || Sbjct 303610 GGCAACGAG 303618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905897810320