Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq249 259 6e-64 >seq249 Length=183263 Score = 259 bits (286), Expect = 6e-64 Identities = 1117/1749 (64%), Gaps = 33/1749 (2%) Strand=Plus/Plus Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413 ||| | | ||||||||||||||| ||||||||||| || | |||||| || | ||| Sbjct 117185 GCCATGGTTCGGAGATAGTACATGCCGGTCTTGAGACCAAGCTTCCATCCGGCGAAGTGC 117244 Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTT 110471 || || | || |||| ||| || || | |||| || ||||| ||| |||| Sbjct 117245 ATGGAGGTGATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTCAGTGACTGAGACT-- 117302 Query 110472 GGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCC 110531 ||||||||||| || || | || ||||| | ||||| | | ||||||| Sbjct 117303 GGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAATGATGGTACGCTGCGAGATTTCCC 117362 Query 110532 AAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAAC 110591 | || || || | ||||||| ||||| ||||| | | ||| |||||| |||| Sbjct 117363 AGACAGTCTTGTATAAGGTCTTGATCTCATCAGGGATGTTGGGGATGCGCTGGATAGAAC 117422 Query 110592 CCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGT 110651 | || | | ||| | | |||||| | || || ||| ||||| || | || | Sbjct 117423 CACCGTCGGCGATGATGCGGTTCTTCATGTTCTCGGTCCAAAGACCCATGTCGACAAGAT 117482 Query 110652 CATTGA----CGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGG 110707 | |||| | ||| | ||||||| |||||||| ||||| | | | Sbjct 117483 CCTTGAGCAACCAGGGG----TTGACAACCTGGAACTCACCAGCGAGCACACGACGAGAG 117538 Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 |||||||||| ||||||||| || ||||| || || || || | ||| || | |||||| Sbjct 117539 TAGATGTTTGATGTGTATGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGGGAAGTGGAG 117598 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827 || || ||||| ||||| | | ||| ||| || | ||| | || ||| ||| Sbjct 117599 GCAGTGGGCATAGGTGCAACGAGCAGAGAGTTGCGGACACCATGCTGTGCGATCTTCTCC 117658 Query 110828 TTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAG 110886 || || | |||| || || | | | || | || ||||||||||| |||| || Sbjct 117659 TTCAGCGAAGCCCAATCCCAGAGGTCGGTAGGAGTGACAC-CCCACATGTCATACTGGAG 117717 Query 110887 CACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAA 110946 | || || || ||| || || || | || || | || | | | || | Sbjct 117718 CTGACCCTGAGAAATGGGCGAGCCTTCGTACGTGGTGTAAGGGCCAAGCTCCTTGGCGAT 117777 Query 110947 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 111006 || ||| | || || ||||| || ||||| || ||||| | | || | || Sbjct 117778 GTCGCAGGAAGAGGTCAAGGCAGCGTGGTAGATGGTCTCGAAGATCTGGGTGTTGAGCTT 117837 Query 111007 CTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTG 111066 |||||| || || || || | | || || || |||| || |||||||| Sbjct 117838 CTTGGCCTCGGGAGACTCGAAAGGCAAACGAAGAGCAAGGAAAGCATCGGCAAGACCTTG 117897 Query 111067 AACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATA 111126 ||||||| ||| ||||| ||||| || | || || || ||| || || || Sbjct 117898 TACACCCAGACCGATAGGCCTGTGACGGAAGTTGCTACGGCGTGCCTCCTCGACAGGGTA 117957 Query 111127 AAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG 111186 ||| ||||||| ||| || || |||| | || || || || || Sbjct 117958 GTGATTGACCTCAATGATCTTGTTGAGGTTGCGGGTACAGACCTGCACGACCTCGTGGAG 118017 Query 111187 TTTTTCATAATCAAA---AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGA 111243 || | | || || | || | | ||| ||| || ||| || || | || Sbjct 118018 CTTCTTGAAGTCGAACACACCCCGCTTGTAGTCA---ACAAACGATGGCAGAGCAACGGA 118074 Query 111244 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAA 111303 ||||| |||||||| || |||||| ||||||| || | || || || || | Sbjct 118075 AGCCAAGTTGCAAACGGCAACCTCATCTGGCGCTGTGTATTCGATGATCTCAGTGCACAG 118134 Query 111304 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTT 111363 |||||| || ||| || || | ||||| ||||| |||||| ||||| |||||||| Sbjct 118135 GTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCGGCATCCTT 118194 Query 111364 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATC 111423 ||| |||||| |||| | || ||||| ||||| | | ||| || || | ||| | | Sbjct 118195 GTAAAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTT 118254 Query 111424 GGCGGCTGGTACAATGGCGTTGGCCCGTCC-CTCCGCCTCGTACTTTGTGTAGAGGGCTT 111482 ||| | || | || | ||| | ||| ||| ||||| ||| ||||| Sbjct 118255 TTGGGCACGGACGGTCTCGC-GACCCTTATTCTCTCTCTCATACTTCTCGTACAGGGCAA 118313 Query 111483 CAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACC 111542 | ||||| || || |||| | |||||||| || || || || | ||| | || Sbjct 118314 CGAACTCGTCGCCGTAGACGTCAGCAAGACCTGGGCACTCGTTGGGGCACATAAGCGTCC 118373 Query 111543 ATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 111602 | | ||| |||| || |||| ||||||||| || || |||||||||| | || | Sbjct 118374 ACTCGCCATTCTCCTGGACACGCTGCATGAAAAGATCGGGGATCCACAGGGCATAGAACA 118433 Query 111603 GATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGA 111662 || | | ||| |||| || | || ||||| | || || ||||| | | || Sbjct 118434 AGTCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTCCTCAAGTCGAGGAAGCCGAAGA 118493 Query 111663 TATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCT 111718 || |||||||||||||| || |||| |||| | || | | | ||| | | Sbjct 118494 CGTCAGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGGGCGCTTGTTGCC-ACCC 118552 Query 111719 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 111778 || | || ||||| || ||| ||| | || |||||||| || || | ||| | ||| Sbjct 118553 TGGTCGACGTAGCGGGCGGTGTTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGAT 118612 Query 111779 TGACCATTTGTCCC-CCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCC 111836 ||||| || || |||| ||| ||| | |||| | | || | | | | Sbjct 118613 GTTCCATTGGTTCCTCCGATATAGGAGCC--AGTGGCACGAATGCGGTGCACATTGAGAC 118670 Query 111837 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 111896 ||||||| ||||| ||| ||||| |||||| | | | || | |||||||||| Sbjct 118671 CAATACCGCCAGCAGTCTTGGAGATCAACGCACAAGTCTTCAATGTGTCGTAGATACCGT 118730 Query 111897 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 111956 || ||| ||||| || |||| ||||||||| ||||| || || |||||| | Sbjct 118731 CAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGGGGATGGTGTGC 118790 Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTGTCGTAT 112015 | || |||||||| || || | ||||| |||| ||| || | ||||| | ||||||| Sbjct 118791 CCGCGTTGAAGAGCGTCGGCGACGCGTGTGTGAAG-TACTTTTGCGACATGTAGTCGTAT 118849 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 ||||| | | | |||||||| ||| |||||| || | ||||| ||||||| |||| Sbjct 118850 GTCTCGATGGCCTTCTCAATGTCCTCCATGTGGATACCAACAGCGACGCGCATGAGCATG 118909 Query 112076 TACTGTGGG 112084 | ||||||| Sbjct 118910 TGCTGTGGG 118918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029346564800