Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq249 163 4e-35 seq50 131 2e-25 >seq249 Length=183263 Score = 163 bits (180), Expect = 4e-35 Identities = 530/814 (65%), Gaps = 27/814 (3%) Strand=Plus/Plus Query 118752 GTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 118811 ||||| || || || || ||||||| ||| || || |||||| || | |||||| || Sbjct 118109 GTGTATTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGG 118168 Query 118812 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 118871 || ||| |||| |||||||||||||||||| | || | || ||||| || || Sbjct 118169 TTGCTCTTCCTGTTGGCGGCATCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTCTGA 118228 Query 118872 GACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTC- 118930 | || ||| || || | ||||| || ||| || | || | | || |||| Sbjct 118229 GCCTCGAGGATGGCATACCAGA-----GCTTTTGGG-CACGGACGGTCTCGCGACCCTTA 118282 Query 118931 TTC-----CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 118985 ||| ||| ||||| ||| ||||| | ||||| || || | | || | || Sbjct 118283 TTCTCTCTCTCATACTTCTCGTACAGGGCAACGAACTCGTCGCCGTAGACGTCAGCAAGA 118342 Query 118986 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 119045 ||||| || | ||||| | || | ||| | ||| ||||| || |||| |||| Sbjct 118343 CCTGGGCACTCGTTGGGGCACATAAGCGTCCACTCGCCATTCTCCTGGACACGCTGCATG 118402 Query 119046 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 119105 || || || |||||||| || || |||| | || ||| ||| | || || | || Sbjct 118403 AAAAGATCGGGGATCCACAGGGCATAGAACAAGTCGCGAGCACGAACCTCCTCCTTGCCG 118462 Query 119106 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 119165 || || | ||| || | ||| | | || || |||||||| || || ||||| | Sbjct 118463 TGGTTCTTCCTCAAGTCGAGGAAGCCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATG 118522 Query 119166 GCGATTGACCCCTTACGACGA------CCAGCCTGGTTTACATACCTCGCAGTGGCGTTA 119219 |||| | || | | || ||| |||||| || || | || ||| ||| Sbjct 118523 GCGAACGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTG 118579 Query 119220 AATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCC-CCGA-ATACGAG 119277 | ||||||||||| || |||| ||| | ||| ||||| || || |||| ||| ||| Sbjct 118580 TAGACACGAAGCATAGGGATGAGACCGTTCGATGTTCCATTGGTTCCTCCGATATAGGAG 118639 Query 119278 ACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 119337 | | |||| | | ||| | | | ||||||||| || || ||| ||||| Sbjct 118640 CC--AGTGGCACGAATGCGGTGCACATTGAGACCAATACCGCCAGCAGTCTTGGAGATCA 118697 Query 119338 GCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGA 119397 ||| || | | | || ||||||| || || || ||| |||| | |||||| Sbjct 118698 ACGCACAAGTCTTCAATGTGTCGTAGATACCGTCAATGCTGTCTTCCTTCATGTCGATGA 118757 Query 119398 GGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGT 119457 ||||||| |||||||| || ||||| || ||||||||||| || || | ||||| Sbjct 118758 GGAAGCAAGATGACATTTGTGGGGATGGTGTGCCCGCGTTGAAGAGCGTCGGCGACGCGT 118817 Query 119458 GGATGAACATAC-CTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCC 119516 | |||| ||| ||| ||||| | |||||| ||||| | | | |||||| ||| Sbjct 118818 GTGTGAA-GTACTTTTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCAATGTCCTCC 118876 Query 119517 CCGTGAATACCGATCGAGACCCGCATAAACATGT 119550 ||| ||||| | | ||| ||||| | ||||| Sbjct 118877 ATGTGGATACCAACAGCGACGCGCATGAGCATGT 118910 Score = 136 bits (150), Expect = 5e-27 Identities = 322/483 (67%), Gaps = 10/483 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||||||||| || ||| | | |||||| |||||||| || |||||||| | Sbjct 117162 TGAACTGAATGGGGGCCGAAGCAGCCATGGTTCGGAGATAGTACATGCCGGTCTTGAGAC 117221 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 | ||||||| | | ||||| |||| | |||| | ||| || | |||| Sbjct 117222 CAAGCTTCCATCCGGCGAAGTGCATGGAGGTGATCTTGCCCATGGTAGGCTCCTTCATGT 117281 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 || ||||| || || || || |||||| || || || || ||||| | ||| | Sbjct 117282 GGATGTTCAGTGACTGAGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAATGA 117341 Query 117985 CATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATAT 118044 | | ||||||||| |||||| |||| | | |||| || ||||| ||||| | Sbjct 117342 TGGTACGCTGCGAGATTTCCCAGACAGTCTTGTATAAGGTCTTGATCTCATCAGGGATGT 117401 Query 118045 CCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACC 118104 ||| ||||| || ||||| | || ||| | | |||||| | || | || Sbjct 117402 TGGGGATGCGCTGGATAGAACCACCGTCGGCGATGATGCGGTTCTTCATGTTCTCGGTCC 117461 Query 118105 AGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAACTCA 118160 | ||||| || | ||||||| | || || | |||||||| |||||| Sbjct 117462 AAAGACCCATGTCGACAAGATCCTTGAGCAACCAGGGG----TTGACAACCTGGAACTCA 117517 Query 118161 CCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 118219 || ||||| || | ||| ||||| || | ||||||||||| |||||||| ||||| Sbjct 117518 CCAGCGAGCACACGACG-AGAGTAGATGTTTGATGTGTATGGCTCGAAGCACTCGTTGTT 117576 Query 118220 ACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 118279 || | ||| |||| |||||||| |||||||| ||||| | ||| || ||| |||| Sbjct 117577 GCCGAGGATCTGGGAAGTGGAGGCAGTGGGCATAGGTGCAACGAGCAGAGAGTTGCGGAC 117636 Query 118280 ACC 118282 ||| Sbjct 117637 ACC 117639 >seq50 Length=575836 Score = 131 bits (144), Expect = 2e-25 Identities = 306/454 (67%), Gaps = 12/454 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786 || || ||||| ||||||||||||||||| ||||| ||| | |||| ||| |||||||| Sbjct 303185 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGC-AAGCGAGATGTTCTCCAT 303243 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGCTGGCACTCCAATCTGTTTGAGGAGA 129844 || || || ||||| | | ||| | | ||| || |||| ||| ||| Sbjct 303244 GAAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTG--GGGTTGCCAAGAGCCAGGAGCAGA 303301 Query 129845 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTA 129904 || || | |||| |||| ||||||| |||| | ||||||||||| || Sbjct 303302 CGGTCGGCGACGAACTCGATGTACTGGCACATGAGAGTAGCGTTCATACCGAGTAGTGCG 303361 Query 129905 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCG 129964 || ||||| || || | | |||| ||| |||||| || || || || | |||||| Sbjct 303362 CAGGGGAGAGCATCGGACAGGAACTCCTGCTCAATCTCGACGGCCTCGGTGATGATGGCC 303421 Query 129965 TGAATGGTCTCCGTGCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 130021 || | | || ||| || | | ||| ||| || || || || | |||| Sbjct 303422 TGCACAGCATCTTTGCTTGGACGGTTGTTGAGCAGAGAGAACAACAGA--CAAG-CAAAG 303478 Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081 || ||| | ||||||||||| || ||||| ||||| || ||| ||||| ||||| Sbjct 303479 TCTGTGTGCATGCCCTCGTCACGAGAAATGAGCTCATTAGAAAAGGTAAGACCGGGCATC 303538 Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 130141 ||||| |||||||||| |||||| || | || || ||| ||||||||| ||||| Sbjct 303539 AGACCACGCTTCTTCAGCCAGAAGATGGACGCGAACGATCCACTGAAGAAGATGCCCTCG 303598 Query 130142 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 || || || |||| |||||| | || |||| Sbjct 303599 ACGGCGGCAAAGGCAACGAGACGGTTGGCGAAGG 303632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432587111280