Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq249 233 2e-56 seq50 95.1 1e-14 seq72 93.3 5e-14 >seq249 Length=183263 Score = 233 bits (258), Expect = 2e-56 Identities = 1140/1781 (64%), Gaps = 51/1781 (3%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||||||| ||||| |||||||||| || | ||||| || ||| |||||||| | Sbjct 118918 CCCACAGCACATGCTCATGCGCGTCGCTGTTGGTATCCACATGGAGGACATTGAGAAGGC 118859 Query 104281 CTTGGAGACATACGACAAGATGTC-CCAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | | |||||||||||| | ||||| | || ||| |||| ||||| | || || |||| Sbjct 118858 CATCGAGACATACGACTACATGTCGCAAAAGTA-CTTCACACACGCGTCGCCGACGCTCT 118800 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || || |||||| || |||||||| ||||||||| |||| || ||||| | Sbjct 118799 TCAACGCGGGCACACCATCCCCACAAATGTCATCTTGCTTCCTCATCGACATGAAGGAAG 118740 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || |||||||||| | || | | | |||||| ||||| ||| |||| Sbjct 118739 ACAGCATTGACGGTATCTACGACACATTGAAGACTTGTGCGTTGATCTCCAAGACTGCTG 118680 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGG-GGGAC 104517 | |||||||| | | | || | | |||| | ||| ||| |||| || || Sbjct 118679 GCGGTATTGGTCTCAATGTGCACCGCATTCGTGCCACT--GGCTCCTATATCGGAGGAAC 118622 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 ||||| ||| | ||| | || || |||||||| || | ||| ||| || ||||| Sbjct 118621 CAATGGAACATCGAACGGTCTCATCCCTATGCTTCGTGTCTACAACAACACCGCCCGCTA 118562 Query 104578 TGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 || | || | | ||| | | | || | |||| |||| || |||||||||| Sbjct 118561 CGTCGACCAGGGT-GGCAACAAGCGCCCTGGTGCGTTCGCCATCTACCTCGAGCCATGGC 118503 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| || || | | ||||| || ||| | ||||| || | ||||||| | || Sbjct 118502 ACGCTGACGTCTTCGGCTTCCTCGACTTGAGGAAGAACCACGGCAAGGAGGAGGTTC-GT 118444 Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 || ||||| | |||| || || ||||| || ||||| |||||| || | || ||||| Sbjct 118443 GCTCGCGACTTGTTCTATGCCCTGTGGATCCCCGATCTTTTCATGCAGCGTGTCCAGGAG 118384 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | |||| | ||| | || | || || || || || ||||| | || | | || Sbjct 118383 AATGGCGAGTGGACGCTTATGTGCCCCAACGAGTGCCCAGGTCTTGCTGACGTCTACGGC 118324 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAG-GA-AGAA----GGTCGGGCGACTGCG 104866 || ||||| | ||||| ||| ||||| ||| || |||| ||||| | ||| || Sbjct 118323 GACGAGTTCGTTGCCCTGTACGAGAAGTATGAGAGAGAGAATAAGGGTCGCGAGAC--CG 118266 Query 104867 ACGGTG-CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 | ||| ||| || | ||| | || || ||| || |||| ||||||||||| | Sbjct 118265 TCCGTGCCCAAAAGC-----TCTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGCAA 118211 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || | |||||||||||| || ||| ||| ||||| || || ||||| | ||| Sbjct 118210 CCCCTTCATGCTTTACAAGGATGCCGCCAACAGGAAGAGCAACCAGAAGAACCTCGGTAC 118151 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045 || || ||||| || || || || ||| | |||| |||| ||||||| || Sbjct 118150 CATTCGCAGCTCCAACCTGTGCACTGAGATCATCGAATACACAGCGCCAGATGAGGTTGC 118091 Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACAT 105104 || || ||| | || || | ||||| || || ||| || | || || | Sbjct 118090 CGTTTGCAACTTGGCTTCCGTTGCTCTGCCATCGTTTGTTGACTACA-AGCGGGGTGTGT 118032 Query 105105 TTGATTATGAAAAACTCCACGAAGTTACG-AAAACTGTCACCAAAAACCTAAACAGAGTT 105163 | || | | || |||||||| || | | |||| ||| ||||| |||| | Sbjct 118031 TCGACTTCAAGAAGCTCCACGAGGTCGTGCAGGTCTGT-ACCCGCAACCTCAACAAGATC 117973 Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 ||||| ||| ||||| || ||| || || || | | ||| | || Sbjct 117972 ATTGAGGTCAATCACTACCCTGTCGAGGAGGCACGCCGTAGCAACTTCCGTCACAGGCCT 117913 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGAT 105283 || ||||| ||||| || ||||| || |||| ||| || | ||| | || || Sbjct 117912 ATCGGTCTGGGTGTACAAGGTCTTGCCGATGCTTTCCTTGCTCTTCGTTTGCCTTTCGAG 117853 Query 105284 TCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTT 105343 || ||| || ||| | |||| | | || || |||||||| || ||||| || ||| Sbjct 117852 TCTCCCGAGGCCAAGAAGCTCAACACCCAGATCTTCGAGACCATCTACCACGCTGC-CTT 117794 Query 105344 GAGGCGAGTTC---AGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 || | ||| || | || ||| ||| || || || | || || || Sbjct 117793 GA--CCTCTTCCTGCGACATCGCCAAGGAGCTTGGCCCTTACACCACGTACGAAGGCTCG 117736 Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTA 105459 || ||| || || ||| || | ||| ||||||| || | || | | | || Sbjct 117735 CCCATTTCTCAGGGTCAGCTCCAGTATGACATGTGGG-GTGTCACTCCTACCGACCTCTG 117677 Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519 || |||| | || ||||| ||| || | ||| | || ||| ||| ||| | Sbjct 117676 GGATTGGGCTTCGCTGAAGGAGAAGATCGCACAGCATGGTGTCCGCAACTCTCTGCTCGT 117617 Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 || || ||||| || |||||||| | || ||| | || || || || ||||| || || Sbjct 117616 TGCACCTATGCCCACTGCCTCCACTTCCCAGATCCTCGGCAACAACGAGTGCTTCGAGCC 117557 Query 105580 CTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA-- 105636 ||||| | |||||||| ||| | | ||||| || ||||| | ||||||| Sbjct 117556 ATACACATCAAACATCTACTCT-CGTCGTGTGCTCGCTGGTGAGTTCCAGGTTGTCAACC 117498 Query 105637 -CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 105695 | | ||| |||| || || || ||||| ||| || || | |||||| | | Sbjct 117497 CCTGGTTGCTCAAGGAT---CTTGTCGACATGGGTCTTTGGACCGAGAACATGAAGAACC 117441 Query 105696 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGA 105755 ||| | | |||||||| || || || | || || |||| || |||| Sbjct 117440 GCATCATCGCCGACGGTGGTTCTATCCAGCGCATCCCCAACATCCCTGATGAGATCAAGA 117381 Query 105756 AGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATC 105815 || ||| || || ||||||||| | | ||||| | |||||||| || | Sbjct 117380 CCTTATACAAGACTGTCTGGGAAATCTCGCAGCGTACCATCATTCAGATGGCCGCTGACC 117321 Query 105816 GTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGAT 105873 ||||| ||||||||| | |||| ||| |||| || |||| | || || || Sbjct 117320 GTGGTGCCTTCATTGACC--AGTCTCAGTCACTGAACATCCACATGAAGGAGCCTACCAT 117263 Query 105874 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 105933 | |||| || | || |||||| | | | |||||| |||||||| || || ||||| Sbjct 117262 GGGCAAGATCACCTCCATGCACTTCGCCGGATGGAAGCTTGGTCTCAAGACCGGCATGTA 117203 Query 105934 TTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 105974 || |||||| | | ||| || ||| |||||||||| Sbjct 117202 CTATCTCCGAACCATGGCTGCTTCGGCCCCCATTCAGTTCA 117162 >seq50 Length=575836 Score = 95.1 bits (104), Expect = 1e-14 Identities = 298/454 (66%), Gaps = 12/454 (3%) Strand=Plus/Minus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||| || | || ||| | || ||||| || ||||| ||||||||| ||| || | Sbjct 303632 CCTTCGCCAACCGTCTCGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGTGGATCGT 303573 Query 94856 TCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 || ||| | || | ||||| |||||||| ||||| ||||| ||||| ||| || || Sbjct 303572 TC-GCGTCCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTTTCTAAT 303514 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAATTA 94974 ||||| || |||||||||||||| | ||| ||| ||||| || || || | Sbjct 303513 GAGCTCATTTCTCGTGACGAGGGCATGCACACAGACTTTGC-TTG--TCTGTTGTTCTCT 303457 Query 94975 TTGCGTATTAA---ACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAG 95031 ||| | || |||| | || || | || | || | | || ||||| ||| Sbjct 303456 CTGCTCAACAACCGTCCAAGCAAAGATGCTGTGCAGGCCATCATCACCGAGGCCGTCGAG 303397 Query 95032 ATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAA 95091 |||||| | | ||| | | ||||| || || ||||| || |||||||||| || Sbjct 303396 ATTGAGCAGGAGTTCCTGTCCGATGCTCTCCCCTGCGCACTACTCGGTATGAACGCTACT 303337 Query 95092 AAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCT 95151 |||| | || || |||| || | || | || | | | || || | Sbjct 303336 CTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGTCTGCTCCTG--GCTCTTGGCAACC 303279 Query 95152 CCAATT--TGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGA 95209 |||| | | ||| | | || || || ||||||||||||||||| || | ||| | Sbjct 303278 CCAAGTACTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCA 303219 Query 95210 AGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 95243 |||| ||||||||||| ||| | ||||| || || Sbjct 303218 AGACCAACTTCTTCGAGAAGCGTGTTGGTGATTA 303185 >seq72 Length=147729 Score = 93.3 bits (102), Expect = 5e-14 Identities = 161/228 (71%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGT-TGATTTTCGCGAGCGACTTCAAAGA 9761 |||||| ||||| |||||||||| |||||| ||| || | || ||| || | || | Sbjct 126897 GGCATCGATCTCGTCAATGAAGATGATGCAGGGTGTGCTCTT-GCGCGCATTGGCGAACA 126839 Query 9762 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGA 9819 || ||||| ||| || || ||||| ||||||||||| || || | | | || | Sbjct 126838 AGTCGCGTACTCGCGAAGCACCGACACCTACAAACATCTCGACGAACTCGGAACCGCTG- 126780 Query 9820 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9879 ||| | || |||||| ||| ||| || || || | || ||| || || |||||||| Sbjct 126779 ACACT-GAAGAAGGGCACACCAGACTCGCCAGCCGTAGCCTTGGCAAGCAGCGTCTTACC 126721 Query 9880 CGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 ||||| || ||| | |||| ||||| || |||||||| ||||| Sbjct 126720 GGTACCGGGGGGACCAGACAGGACAGCACCGCGAGGAATCTTTGCGCC 126673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258335723120