Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq249 217 2e-51 seq53 197 2e-45 seq170 109 6e-19 seq136 102 9e-17 seq118 89.7 6e-13 >seq249 Length=183263 Score = 217 bits (240), Expect = 2e-51 Identities = 564/853 (66%), Gaps = 10/853 (1%) Strand=Plus/Plus Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966 ||| |||| ||||| ||||| ||||| || | |||| | |||| ||| || ||||| Sbjct 118072 GGAAGCCAAGTTGCAAACGGCAACCTCATCTGGCGCTGTGTATTCGATGATCTCAGTGCA 118131 Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026 || || || ||| ||||| ||||| |||||||| ||| |||| || || Sbjct 118132 CAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCGGCATC 118191 Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAAT 81086 |||||| |||| | ||| | || |||||| ||| | || ||||||||| | ||| | Sbjct 118192 CTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAG 118251 Query 81087 CTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTC 81146 || | || ||| || ||| || || | ||||||| |||| | Sbjct 118252 CTTTTGGGCACGGACGGTCTCGCGACCCTTATTCTCTCTCTCATACTTCTCGTACAGGGC 118311 Query 81147 GTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTG 81206 |||||| | | |||| | |||| || ||||||||||||| |||||||| || Sbjct 118312 AACGAACTCGTCGCCGTAGACGTCAGCAAGACCTGGGCACTCGTTGGGGCACATAAGCGT 118371 Query 81207 CCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAA 81266 ||| ||| | | || ||| || ||||||| || |||||||| ||||| ||| Sbjct 118372 CCACTCGCCATTCTCCTGGACACGCTGCATGAAAAGATCGGGGATCCACAGGGCATAGAA 118431 Query 81267 CAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCA 81325 || |||||| ||| || ||||||| | || ||||| | ||| ||||| ||| | | Sbjct 118432 CAAGTCGCGAGCA-CGAACCTCCTCCTTGCCGTGGTTCTTCCTCAAGTCGAGGAAGCCGA 118490 Query 81326 TGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCAC 81382 || ||| || ||||||||||| || || | ||||| || || ||| ||||| Sbjct 118491 AGACGTCAGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGGGCGCTTGTTGCCAC 118550 Query 81383 CCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTG 81442 |||||| |||||| ||||| || ||| | ||||| | ||||||||||| ||| | | Sbjct 118551 CCTGGTCGACGTAGCGGGCGGTGTTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCG 118610 Query 81443 ACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAG 81500 | || || || || ||||| || || |||| || | | ||| |||| || Sbjct 118611 ATGTTCCATTGGTTCCTCCGATATAGGAGCCAGTGGCACGAATGCGGTGCACATTG--AG 118668 Query 81501 ACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCC 81560 ||| || || || | ||| || ||| ||||| |||| || || || || || Sbjct 118669 ACCAATACCGCCAGCAGTCTTGGAGATCAACGCACAAGTCTTCAATGTGTCGTAGATACC 118728 Query 81561 CTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGA 81620 || ||||| |||| |||||||| | | ||| || |||||| || ||| | || Sbjct 118729 GTCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGGGGATGGTGT 118788 Query 81621 GCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATA 81680 ||| || ||||| || || || | |||||| |||| || | ||||| ||| || Sbjct 118789 GCCCGCGTTGAAGAGCGTCGGCGACGCGTGTGTGAAGTACTTTTGCGACATGTAGTCGTA 118848 Query 81681 GGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACAT 81740 || || || | ||| || || ||| ||||| | ||| || ||||| | ||| Sbjct 118849 TGTCTCGATGGCCTTCTCAATGTCCTCCATGTGGATACCAACAGCGACGCGCATGAGCAT 118908 Query 81741 GTACTG-GGGCGT 81752 || ||| |||||| Sbjct 118909 GTGCTGTGGGCGT 118921 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || |||||||||||||| |||||||| || |||||| ||| | |||||| || Sbjct 117191 GTTCGGAGATAGTACATGCCGGTCTTGAGACCAAGCTTCCATCCGGCGAAGTGCATGGAG 117250 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | || || | || |||| ||||||||| ||||||||||| ||| Sbjct 117251 GTGATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTCAGTGACTGAGACTGGTCAATG 117310 Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAAT 80189 || || ||||| || || ||||| | ||| || Sbjct 117311 AAGGCACCACGGTCAGCGGCCATCTGAATGAT 117342 >seq53 Length=112647 Score = 197 bits (218), Expect = 2e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| ||||| |||||||||||||| Sbjct 70123 ATGCAAATCTTCGTCAAGACCCTGACAGGCAAGACCATTACCCTTGAGGTTGAGTCGTCG 70064 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||| | || ||||||||||||||||| || || || |||||| Sbjct 70063 GATACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCACCTGACCAG 70004 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||||||||| || || || | ||||| ||| ||||||| || Sbjct 70003 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGACGGCCGTACGCTATCAGACTACAAC 69944 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||||| || | || | ||||| || ||||| Sbjct 69943 ATCCAGAAGGAATCTACTCTCCACTTGGTACTCCGTCTCCGTGGTGG 69897 Score = 194 bits (214), Expect = 2e-44 Identities = 181/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| ||||| |||||||||||||| Sbjct 69895 ATGCAAATCTTCGTCAAGACCCTGACAGGCAAGACCATTACCCTTGAGGTTGAGTCGTCG 69836 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||| | || ||||||||||||||||| || || || |||||| Sbjct 69835 GATACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCACCTGACCAG 69776 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||||||||| || ||||||| ||| || || | ||||| ||| Sbjct 69775 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACACTCTCGGACTACAAT 69716 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || || || || | || | ||||| || || || || Sbjct 69715 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGTCTGCGTGGCGGCCA 69666 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||| ||||| || | ||| | || | ||| Sbjct 70611 ACCGGCAAGACGATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAACGTCAAGAGC 70552 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || |||||||||||||| || |||||||| ||||||||||| || || ||||| || ||| Sbjct 70551 AAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCCTGATCTTTGCCGGCAAG 70492 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| ||||||||| | ||||| ||| |||| ||||| ||||| || || Sbjct 70491 CAGCTTGAGGATGGTCGTACCCTTTCGGACTACAATATCCAGAAGGAGTCCACCCTCCAC 70432 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || ||||| Sbjct 70431 CTCGTCCTCCGCCTACGTGGTGG 70409 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || ||||| || || |||||| |||| ||| | || | ||| Sbjct 70327 ACCGGCAAGACCATCACTCTCGAAGTCGAGTCATCCGATACCATCGACAACGTCAAGAGC 70268 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || || ||||||||||| || ||||| || |||||||| | || || ||||| ||| Sbjct 70267 AAGATCCAAGACAAGGAGGGTATCCCTCCTGATCAGCAGCGCTTGATCTTCGCTGGCAAG 70208 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || ||||| |||| || ||| | | ||||| || |||| ||||| ||||| || || Sbjct 70207 CAGCTCGAAGATGGCCGCACCTTGTCCGACTACAACATCCAGAAGGAGTCCACACTACAC 70148 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || ||||| Sbjct 70147 CTTGTCCTACGCCTGCGTGGTGG 70125 >seq170 Length=170908 Score = 109 bits (120), Expect = 6e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || || ||||||||||| || ||||| || ||||||||||| | || Sbjct 129825 AATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAGCAGCGCTTGATC 129766 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| || ||||| | ||| ||||| | ||||| || |||| ||||| Sbjct 129765 TTCGCCGGCAAGCAGCTTGAGGACGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAG 129706 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||| || || ||| | ||||| || ||||| Sbjct 129705 TCGACTCTCCACCTGGTCCTTCGTCTCCGTGGTGG 129671 >seq136 Length=202766 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| ||||| || |||||||||||||| || || || || ||||| |||||| Sbjct 66899 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAG 66958 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | ||||| || |||| ||||| || || || || || || || Sbjct 66959 GATGGCCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGACGCTCCACCTGGTGCTG 67018 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 67019 CGCCTGCGTGGTGG 67032 >seq118 Length=153408 Score = 89.7 bits (98), Expect = 6e-13 Identities = 284/437 (65%), Gaps = 10/437 (2%) Strand=Plus/Minus Query 31954 GATATCAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTG 32013 |||| | ||| ||||||||| || || || |||||||| ||||| ||||| Sbjct 147508 GATAACTTGCGATCCATTCCATCAGTCATCGATGGTTTCAAGCCTGGTCAGCGAAAGGTC 147449 Query 32014 ATATACGCCTGCCTCAAGAAGAACCTGTCG-AGTGACATGAAGGTGGCGCAGCTGTCGGG 32072 | ||| ||||| ||| | ||| | ||| | || | ||||| | ||||| | || Sbjct 147448 CTCTACACCTGCTTCAGGCGAAACAT-TCGCAAAGATGTCAAGGTCGTCGAGCTGGCTGG 147390 Query 32073 CTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGT 32132 | ||| | | || | ||| ||||| || || || | || ||||| || || Sbjct 147389 TTCCGTCTCTGGATCTACCGACTACGCTCACGGTGAAGCATCCATGCAAGGCACTATCGT 147330 Query 32133 CAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACA 32192 || || || |||||||| ||| |||| ||| | |||| | ||||| ||| | Sbjct 147329 GGGTCTGGCGCAAAACTTTGTTGGTTCAAACAACATCAACTGCTTGGAGCCGAGTGGTAA 147270 Query 32193 GTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCG 32252 || || |||| || |||||| |||||||| ||| |||||||||||| ||| || Sbjct 147269 CTTCGGTTCCCGTCTGCAGGGTGGCGGTGATGCTGCCAGCGCCCGTTACATCTACACTCG 147210 Query 32253 TCTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTAC-- 32310 ||| |||||| | || | || ||| |||| ||| ||||| | || | ||| Sbjct 147209 TCTGTCACCTTTCGCACGTAGAATCTTCCACCCTCAGGATGATGCTCTACTGAGTTACGG 147150 Query 32311 --AATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGA 32368 ||| ||||||| | | ||||| | | | || |||| | |||||||||| Sbjct 147149 AGAAT----CTGACGGTAACAAAATTGAGCCCGAGATGTATGTTCCGATTCTTCCGATGA 147094 Query 32369 TCTTGGTGAACGGTGCA 32385 || | || |||||| || Sbjct 147093 TCCTTGTCAACGGTTCA 147077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307990438560