Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq53 172 1e-37 seq170 123 6e-23 seq249 96.9 8e-15 seq136 93.3 1e-13 >seq53 Length=112647 Score = 172 bits (190), Expect = 1e-37 Identities = 152/190 (80%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || ||||| || || |||| |||||| | ||||| Sbjct 70424 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAAAGGGTACGACCATCC 70483 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| || ||||| ||||||| |||||||||||| Sbjct 70484 TCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCC 70543 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||||||||| || || |||||||| ||||||||| Sbjct 70544 TGAATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATCGTC 70603 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 70604 TTGCCGGTGA 70613 Score = 154 bits (170), Expect = 3e-32 Identities = 153/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| || | |||||||||||| || |||||||| || |||||||| || || | | ||| Sbjct 70130 ACGCAGGCGTAGGACAAGGTGTAGTGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGT 70189 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| ||||||||||| |||||||| | ||| || || |||||||| | || Sbjct 70190 GCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATACC 70249 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| |||||||| || ||||| |||||||| || || || || ||||| Sbjct 70250 CTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGATGACTCGACTTCGAG 70309 Query 211073 AGTGATCGTCTTTCCCGT 211090 |||||| ||||| || || Sbjct 70310 AGTGATGGTCTTGCCGGT 70327 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||| || || || |||||||| || || | || || | || ||| Sbjct 69912 AGTACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGCGTACGGCCGTCT 69971 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||| || || || |||||||| || | || ||||||||| Sbjct 69972 TCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCC 70031 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || ||||| || || |||||||| || || || ||| Sbjct 70032 TGAATCTTGGACTTGACATTGTCAATGGTATCCGACGACTCAACCTCAAGGGTAATGGTC 70091 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 70092 TTGCCTGTCAGGGTCTTGACGAAGATTTGCAT 70123 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || ||||| || || |||| || || | ||||| Sbjct 69684 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAGTCCGAGAGTGTGCGACCATCC 69743 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || || || |||||||| || | || ||||||||| Sbjct 69744 TCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCC 69803 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || ||||| || || |||||||| || || || ||| Sbjct 69804 TGAATCTTGGACTTGACATTGTCAATGGTATCCGACGACTCAACCTCAAGGGTAATGGTC 69863 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 69864 TTGCCTGTCAGGGTCTTGACGAAGATTTGCAT 69895 >seq170 Length=170908 Score = 123 bits (136), Expect = 6e-23 Identities = 104/128 (81%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||| ||||| || |||||||| || || | |||||| | || || Sbjct 129686 AGGACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCC 129745 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | ||| || ||||| || |||| |||||||||||| Sbjct 129746 TCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCC 129805 Query 211023 TGGATCTT 211030 |||||||| Sbjct 129806 TGGATCTT 129813 >seq249 Length=183263 Score = 96.9 bits (106), Expect = 8e-15 Identities = 185/273 (68%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152 |||||| ||||||||||| ||| |||||| ||||| |||||||| | || Sbjct 118159 GTTCTTCTGGTTGCTCTTCCTGTTGGCGGCATCCTTGTAAAGCATGAAGGGGTTGCCAGT 118218 Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212 ||| | |||||| |||| ||| || ||| |||| ||||| ||||| |||| | Sbjct 118219 CTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTTTGGGCACGGACGGTCTCGCGACC 118278 Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272 || || |||| ||||| | ||| || | |||| || || ||||| ||| | Sbjct 118279 CTTATTCTCTCTCTCATACTTCTCGTACAGGGCAACGAACTCGTCGCCGTAGACGTCAGC 118338 Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332 ||||| || ||| |||||||| | || |||||| || | |||| || || | Sbjct 118339 AAGACCTGGGCACTCGTTGGGGCACATAAGCGTCCACTCGCCATTCTCCTGGACACGCTG 118398 Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 |||||| || || | | |||| | ||||||||| Sbjct 118399 CATGAAAAGATCGGGGATCCACAGGGCATAGAA 118431 >seq136 Length=202766 Score = 93.3 bits (102), Expect = 1e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || | ||| || | ||||| Sbjct 67017 AGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 66958 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| || || || ||||| || |||| || |||||||| Sbjct 66957 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 66899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146980147370