Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq53 89.7 4e-13 >seq53 Length=112647 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || ||||| ||| || || ||||| || || | ||||| || | || || Sbjct 69686 CACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAGTCCGAGAGTGTGCGACCATCCTC 69745 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193 ||||| || || ||||| || |||||||||||||| |||||| | || ||| |||||| Sbjct 69746 CAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGTGGG-ATGCCCTCCTTGTCCT 69804 Query 39194 TGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || |||| | | | ||||| |||||| || || | || || | | Sbjct 69805 GAATCTTGGACTTGACATTGTCAATGGTATCCGACGACTCAACCTCAAGGGTAATGGTCT 69864 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || ||||| || || || ||||||||||| Sbjct 69865 TGCCTGTCAGGGTCTTGACGAAGATTTGCAT 69895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543830540594