Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq219 96.9 3e-15 >seq219 Length=188997 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||||| ||| ||||| |||||||| || || |||||||||||||| ||| | Sbjct 115768 CGAAATGCCGCCATTGGAAGCCGTACACAGGCCCAAGGTCTCCCTCTTCGTGGTGTGACA 115827 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCCCCTT 30132 |||| |||| | || | ||||||||| ||||||||||||| | || ||| Sbjct 115828 AGCCGACGCTGTCGAGGTAGGTGCGCGAACCGTTGCCGTCCCAGATCTTGATGCCAGCTT 115887 Query 30133 CTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30192 || | || | ||| ||| |||||| || |||||||| || || || | | || Sbjct 115888 CTTGCAGGG--ACTTGTAGTGTGTGGAGCCAGCAACGAACCAGAGAAGTTCGCCGATTAC 115945 Query 30193 GGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231 ||| | ||| || | ||||||||||||||||| || Sbjct 115946 GGCGCGCAGAAACACGCGTTTGGTCGTGAGGAGGGGTAA 115984 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 29596 GTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTC 29655 ||| ||| ||||||| |||||| | ||||||| ||| | || | | | | | || Sbjct 115313 GTTGATCTTCAGTGTAGGAAAGTCGCGTGGCTCCCGCTCTACTTGCACCTTGACTGCGTC 115372 Query 29656 CACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAG 29715 ||||| || ||| || || || || |||| ||| || ||| ||||||| || Sbjct 115373 GACGTGATCGCAGTACACATGTGCGTCGCCCATGGTATGTGTAAAGGTTCCCGGTGTGAG 115432 Query 29716 CCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCAC 29775 || ||| || |||| ||||| ||| || |||| ||| ||||||||||||||||| Sbjct 115433 ATCGCAGACATGCGCCAGCATGTGCGTTAGCAGAGCGTATGATGCGATGTTAAAGGGCAC 115492 Query 29776 CCCGAGCCCCATGTCCCCTGACCTCTGGTAGAG 29808 ||||| ||||| || | || | |||||| || Sbjct 115493 GCCGAGTCCCATATCGCAAGAGCGCTGGTACAG 115525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406161526861468