Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq249 138 2e-27 seq50 87.8 2e-12 >seq249 Length=183263 Score = 138 bits (152), Expect = 2e-27 Identities = 388/586 (66%), Gaps = 10/586 (2%) Strand=Plus/Plus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 || ||||| || || |||||||| | | ||| || |||| |||| || || | ||| Sbjct 118343 CCTGGGCACTCGTTGGGGCACATAAGCGTCCACTCGCCATTCTCCTGGACACGCTGCATG 118402 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || ||||| || ||||| || ||| || | || || | | | || || || || Sbjct 118403 AAAAGATCGGGGATCCACAGGGCATAGAACAAGTCGCGAGCACGAACCTCCTCCTTGCCG 118462 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| | | ||||| || | | | |||| |||||||| || || || || Sbjct 118463 TGGTTCTTCCTCAAGTCGAGGAAGCCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATG 118522 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | ||||| || || || || ||||| || | || | ||||||||| || || Sbjct 118523 GCGAACGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGTAG 118582 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| || || | |||||| ||||||||||| ||||| ||||| ||| Sbjct 118583 ACACGAAGCATAGGGATGAGACCGTTCGATGTTCCATTGGTTCCTCCGATATAGGAGCCA 118642 Query 78255 CTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | || ||||| | | || || | || || || || || |||| || || | | Sbjct 118643 GTGGCACGAATGCGGTGCACATTGAGA--CCAATACCGCCAGCAGTCTTGGAGATCAACG 118700 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372 | ||| |||||||| ||||||||||| || || ||||| ||| |||||| | || | Sbjct 118701 CACAAGTCTTCAATGTGTCGTAGATACCGTCAATGCTGTCTTCCTTCATGTCGATGAGGA 118760 Query 78373 AACAGCTAGACATTTGATGATGA-ACAGTTCCTGCATTAAATAATGTCGGAGATGCATGC 78431 | || |||||||| || || || || || || || | ||||| || || || Sbjct 118761 AGCAAGATGACATTTG-TGGGGATGGTGTGCCCGCGTTGAAGAGCGTCGGCGACGCGTGT 118819 Query 78432 GTAAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCC-CATT 78489 || || | |||| || | |||| | |||||| || || || || |||||| | | Sbjct 118820 GTGAAGTACTTTTGCGACATGTAG-TCGTATGTCTCGATGGCCTTCTCAATGTCCTCCAT 118878 Query 78490 GATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535 | || || || || || || ||||| | ||| ||||| || | ||| Sbjct 118879 G-TGGATACCAACAGCGACGCGCATGAGCATGTGCTGTGGGCGTTC 118923 >seq50 Length=575836 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 || |||||||| || ||||||||||| || ||||| || || ||||| || || | |||| Sbjct 303512 TCATTAGAAAAGGTAAGACCGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGACGCG 303571 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 || |||||| ||||| ||||| || ||||| ||||| || Sbjct 303572 AACGATCCACTGAAGAAGATGCCCTCGACGGCGGCAAAGGC 303612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665865024320